Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019165 [exp] 132 / 5e-40 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041663 pacid=23146994 polypeptide=Lus10041663 locus=Lus10041663.g ID=Lus10041663.BGIv1.0 annot-version=v1.0 ATGACGACGACGACCAACACAAAAGTGTCCTCTGCAACCATAGTCTTCCTCGTTACGCTCATCCTTCTCCAAACCGTCTCTGCCAGGAGGAACCTGCTCG ACACAGGATCTCCCCAAACCGGGTATGGCGAAGAGAAGGGCGACGGGAGTAAAAGCGGGGTACAGAGGAGCGAATCCAGGGACTCTGGCTCAGCCAACGG CGATAGGTCTCCCACTGCCGGTACGGTCCAAATGCCGCCGCCCACTGCGGTGACTAGTGTCTCCTACAATACTGGTGGAGGTTCCAACAACAACAATAAT TACCAGCCATCGTCTGATGTTCGAGACGACTATTCATCACCTCCTGGAAATTACGGATATGGTAGGGGTGGATCCGGCGGATCGAATACCCAGCCGGAAC GTCCTCCTAGCGACGGTTACGTGCCTGCAGTAGAAGGCCGAGGAGGCTTTAATTAA
AA sequence Show only first row Show all	>Lus10041663 pacid=23146994 polypeptide=Lus10041663 locus=Lus10041663.g ID=Lus10041663.BGIv1.0 annot-version=v1.0 MTTTTNTKVSSATIVFLVTLILLQTVSARRNLLDTGSPQTGYGEEKGDGSKSGVQRSESRDSGSANGDRSPTAGTVQMPPPTAVTSVSYNTGGGSNNNNN YQPSSDVRDDYSSPPGNYGYGRGGSGGSNTQPERPPSDGYVPAVEGRGGFN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10041663 [exp]	0	1
AT1G01490			Heavy metal transport/detoxifi...		Lus10027522 [exp]	1.7	0.9053
					Lus10041664 [exp]	3.7	0.9035
					Lus10023082 [exp]	4.7	0.8606
AT5G62230		ERL1	ERECTA-like 1 (.1.2)		Lus10027580 [exp]	4.9	0.8970
AT1G34670	MYB	ATMYB93	myb domain protein 93 (.1)		Lus10039771 [exp]	6.9	0.8704
AT4G12010			Disease resistance protein (TI...		Lus10006789 [exp]	6.9	0.8606
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Lus10018379 [exp]	9.4	0.8758
					Lus10012064 [exp]	10.9	0.8477
AT5G10770			Eukaryotic aspartyl protease f...		Lus10020099 [exp]	11.0	0.8719
AT2G14610		PR-1, PR1, ATPR...	pathogenesis-related gene 1 (....		Lus10020491 [exp]	12.7	0.8469

Compare expression of checked genes

Lus10041663 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.