Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041664 pacid=23146849 polypeptide=Lus10041664 locus=Lus10041664.g ID=Lus10041664.BGIv1.0 annot-version=v1.0 ATGGATACTTGTTCTTCAAAATTCGTCTTGTCAATTACTATCCTCATCCTCTCTGTCTCTCGCTTCTCTTCTGCTAGGGAACTTCTCCAGTTTCTTCCTC CTCTTGGGAGCAACGTCCCCGGCGGCTTTAATGCTCCTAGTGATACTCCGGTCAACAAAGTCAACTTCACTAGCGAGACCAAGGGCTCTGCGTACGGCCA AGTAGTATCTGTCAACGGGAAACCACAGTCGAAGCACGGCGAGGTCTCGGTGATCACAGGGACTGCCCATGCCGGATCCGAGACAGGTCAAGTCCCTGGA TCCGCTTCCGCGAATTACACTAACGGAAACGCTCAAGGGACTATGTATGGCAATGATGGCAAGCCGTTTGTCCAAGGGGGCAAGTCTAACAACGGAAATG TTAACGTTACAATATACGGCAGTAACGGCCAGCCCATTTTCCACTATGAGTCACCCCGGCGGCGGCGGGAGGTACTGCTACCGCCGCTGGGCCGGCGGTT CCACCCTAGGATTATTAATTAA
AA sequence Show only first row Show all	>Lus10041664 pacid=23146849 polypeptide=Lus10041664 locus=Lus10041664.g ID=Lus10041664.BGIv1.0 annot-version=v1.0 MDTCSSKFVLSITILILSVSRFSSARELLQFLPPLGSNVPGGFNAPSDTPVNKVNFTSETKGSAYGQVVSVNGKPQSKHGEVSVITGTAHAGSETGQVPG SASANYTNGNAQGTMYGNDGKPFVQGGKSNNGNVNVTIYGSNGQPIFHYESPRRRREVLLPPLGRRFHPRIIN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10041664 [exp]	0	1
AT5G10770			Eukaryotic aspartyl protease f...		Lus10020099 [exp]	2.8	0.9393
AT5G26340		ATSTP13, MSS1, ...	SUGAR TRANSPORT PROTEIN 13, Ma...		Lus10041210 [exp]	3.5	0.9353
AT1G64380	AP2_ERF		Integrase-type DNA-binding sup...		Lus10001898 [exp]	3.6	0.8780
					Lus10041663 [exp]	3.7	0.9035
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Lus10018379 [exp]	4.0	0.9355
AT1G31710			Copper amine oxidase family pr...		Lus10010542 [exp]	4.0	0.8963
AT5G62230		ERL1	ERECTA-like 1 (.1.2)		Lus10027580 [exp]	4.5	0.9257
AT5G24530		DMR6	DOWNY MILDEW RESISTANT 6, 2-ox...		Lus10032930 [exp]	4.8	0.8576
AT5G10770			Eukaryotic aspartyl protease f...		Lus10000265 [exp]	5.5	0.9215
AT5G10760			Eukaryotic aspartyl protease f...		Lus10026905 [exp]	6.3	0.9314

Compare expression of checked genes

Lus10041664 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.