Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G36790 651 / 0 Major facilitator superfamily protein (.1) AT2G18590 500 / 2e-175 Major facilitator superfamily protein (.1) AT5G10190 324 / 3e-106 Major facilitator superfamily protein (.1) AT1G78130 315 / 6e-103 UNE2 unfertilized embryo sac 2, Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026037 [exp] 719 / 0 AT4G36790 639 / 0.0 Major facilitator superfamily protein (.1) Lus10038972 [exp] 337 / 6e-111 AT5G10190 720 / 0.0 Major facilitator superfamily protein (.1) Lus10027264 [exp] 147 / 3e-41 AT5G10190 337 / 1e-114 Major facilitator superfamily protein (.1) Lus10027265 [exp] 70 / 4e-14 AT5G10190 129 / 3e-36 Major facilitator superfamily protein (.1) Lus10011580 [exp] 52 / 8e-07 AT5G64500 625 / 0.0 Major facilitator superfamily protein (.1) Lus10019244 [exp] 43 / 0.0006 AT2G22730 638 / 0.0 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G030800 [exp] 706 / 0 AT4G36790 633 / 0.0 Major facilitator superfamily protein (.1) Potri.007G091800 [exp] 325 / 2e-106 AT5G10190 643 / 0.0 Major facilitator superfamily protein (.1) Potri.007G091700 [exp] 311 / 3e-101 AT5G10190 660 / 0.0 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10041712 pacid=23146752 polypeptide=Lus10041712 locus=Lus10041712.g ID=Lus10041712.BGIv1.0 annot-version=v1.0 ATGGCATCAATAATGGAGCGCGCGGACGAGAATCTTCTCCCATCCGTTTACAAGGAAGTTAGTGAAGCCTTCAATGCAGGTCCATCAGATTTGGGATACC TTACTTTCATGAGGAACTTTGTTCAGGGGCTCGCTTCACCATTAGCTGGCGTTTTAGTCATAAACTACGACCGCCCCACCGTCCTTGCAATGGGGACTTT TTGCTGGGCGTTGTCAACTGCTGCAGTTGGTGCAAGCCACCATTTCCTGCAAGTAGCGTTTTGGAGGGCAATTAATGGGTTTGGCTTGGCTATCGTCATA CCGGCACTCCAATCTTTCATTGCTGATAGCTATGGGGATGGAGTCAGAGGTGCAGGGTTTGGATTGGTGAGCCTTGTTGGTAACTTGGGTGGGATTGGAG GCGGTGTTCTGGCAACGATCATGGCTGGTCATGAGTATTGGGGTGTGCCCGGATGGAGATTTGCATTTGTTATGATGGCATCGTTGAGTTTTGTCATTGG GTTTCTTGTTTTCATGTTTGTTGTTGATCCAAGGAAATCAATGGCTGCTCCTAGTACTCGCAGTACAGTACCTGAGAGTTCTTCTGTCAGGGATGAGCTA ATTGAGAAGAGTAATACCAGTACAACTTCTATATGGGTGGAATCATGGAGGGCCATGGGAACTGTTCTGAAAGTAAAGACATTTCAGGTCATTGTATTGC AGGGAGTCGTCGGGTCTTTGCCATGGACCGCCATGGTGTTCTTCACCTTGTGGTTCCAACTTATCGGTTTTGATCATAACAGGACAGCAGCGCTACTGAG CTTATTTGCCTTCGGATGTGCATCGGGGAGCCTAGTGGGCGGACTAGTTGCGGATCAAATGTCACGCCTTTATCCTCACTCTGGCCGTATAATGTGCGCA CAGTTCAGTTCATTCATGGGGATCCCTTTCTCTTGGTTTCTCCTGCAAGTGATCCCTCAGTCAGTAGACAGCTACTCCATCTTTGCTGCTACACTTTTCG TCATGGGTCTCACAATCAGCTGGAACGCAACTGCAGCTAACGGTCCGATGTTTGCCGAGGTTGTCCCCATGAAGCACAGGACCATGATCTACGCCTTCGA TCGGGCATTTGAGGTTTCGTTCTCTTCGTTCGCTGCTCCCTTGGTCGGGATTTTGTCGGAGAGGACTTTCGGTTATGATACGAAGGCTATCGACCCGCTT AAAGGATCAATACGCGAAGCCTCTGCTCTGTCCAAAGGGCTGCTGTCTATGATGGCAGTTCCTTTCGGATTGTGTTGCTTGTCTTACACTCCATTGTACA AGTTCTTTAGGCATGATAGAGAGAATGCTAAGCTGGCCAGTGCCAAAGAGGTACAAATGAACGATAAGGCATAA
AA sequence Show only first row Show all	>Lus10041712 pacid=23146752 polypeptide=Lus10041712 locus=Lus10041712.g ID=Lus10041712.BGIv1.0 annot-version=v1.0 MASIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFMRNFVQGLASPLAGVLVINYDRPTVLAMGTFCWALSTAAVGASHHFLQVAFWRAINGFGLAIVI PALQSFIADSYGDGVRGAGFGLVSLVGNLGGIGGGVLATIMAGHEYWGVPGWRFAFVMMASLSFVIGFLVFMFVVDPRKSMAAPSTRSTVPESSSVRDEL IEKSNTSTTSIWVESWRAMGTVLKVKTFQVIVLQGVVGSLPWTAMVFFTLWFQLIGFDHNRTAALLSLFAFGCASGSLVGGLVADQMSRLYPHSGRIMCA QFSSFMGIPFSWFLLQVIPQSVDSYSIFAATLFVMGLTISWNATAANGPMFAEVVPMKHRTMIYAFDRAFEVSFSSFAAPLVGILSERTFGYDTKAIDPL KGSIREASALSKGLLSMMAVPFGLCCLSYTPLYKFFRHDRENAKLASAKEVQMNDKA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G36790			Major facilitator superfamily ...		Lus10041712 [exp]	0	1
AT1G09795		HISN1B, ATATP-P...	ATP phosphoribosyl transferase...		Lus10003685 [exp]	8.0	0.7703
AT1G59990		RH22, EMB3108	RNA helicase 22, EMBRYO DEFECT...		Lus10010711 [exp]	11.4	0.7766
AT1G57610			Protein of unknown function (D...		Lus10019127 [exp]	13.0	0.7500
AT1G06950		ATTIC110, TIC11...	ARABIDOPSIS THALIANA TRANSLOCO...		Lus10008580 [exp]	13.4	0.7647
AT1G49510		EMB1273	embryo defective 1273 (.1)		Lus10027929 [exp]	15.5	0.7657
AT5G63310		NDPK1A, NDPKIAI...	NDP KINASE 1A, NUCLEOSIDE DIPH...		Lus10017931 [exp]	15.7	0.7631
AT5G19750			Peroxisomal membrane 22 kDa (M...		Lus10012098 [exp]	16.2	0.7597
AT1G10510		EMB2004	embryo defective 2004, RNI-lik...		Lus10030829 [exp]	18.1	0.7639
AT4G17300		ATNS1, NS1, OVA...	ovule abortion 8, Class II ami...		Lus10028945 [exp]	23.5	0.7265
AT4G12060			Double Clp-N motif protein (.1...		Lus10007005 [exp]	32.1	0.7678

Compare expression of checked genes

Lus10041712 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.