Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G66440 96 / 3e-23 unknown protein AT4G34560 54 / 1e-08 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028329 [exp] 402 / 2e-142 AT5G66440 117 / 1e-31 unknown protein Lus10025994 [exp] 75 / 7e-16 AT5G66440 91 / 5e-22 unknown protein Lus10014287 [exp] 71 / 8e-15 AT5G66440 79 / 4e-18 unknown protein Lus10040435 [exp] 49 / 2e-06 AT5G66440 104 / 3e-27 unknown protein Lus10023551 [exp] 49 / 2e-06 AT5G66440 95 / 2e-23 unknown protein Lus10042306 [exp] 47 / 5e-06 AT5G66440 97 / 2e-24 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G021500 [exp] 137 / 1e-38 AT5G66440 147 / 6e-43 unknown protein Potri.005G120300 [exp] 131 / 2e-36 AT5G66440 134 / 4e-38 unknown protein Potri.009G119000 [exp] 67 / 8e-13 AT4G34560 90 / 8e-22 unknown protein Potri.004G157300 [exp] 64 / 7e-12 AT4G34560 107 / 9e-29 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041775 pacid=23146603 polypeptide=Lus10041775 locus=Lus10041775.g ID=Lus10041775.BGIv1.0 annot-version=v1.0 ATGGATTCGTCGGATTTTGAGGTCCATTTGAAATCGCAGAAATCAACCGCTCATGTGTTCCGTTACTACCACTACGGCCGCCACCTCCGCGGCTTCCGTA CTGCCTTCCGCGCCGTTGAGTTCTTGGCTGCTCTGCTTCTCTTCCTCTGGATGTTCACTCACCTCCCGATCGCTGTCCAGATCTCCGCCGCCTTCTTCCG CCGCCTCGCCACCGTCATCGAGAGCCCTCCCTTCGTTTTCCTCATCTGCAACGCCATCATTGTCACGCTCATCGTCAAACCCGGCAGATTCGCCTCCGAG AATCCCGCCGAGGCGAAGAATGCCGACGACGATCTCTACGGTGAGATCCTCAAGAACGCCGAATCCAGCTTCCAGAAGACGATCCCCGAGCTTCCCCTGC ATACTCCTCTGCCTGATGCGGCGGAGCCGGAGACAGACACGGCGGATGTGTTTGAGGACAAAGAGATTATTGTCTCCCCGATCAAATCCATCGCTCCTCA TCAAGTCGGTGCTTGCGAAACGGAAGATGCTGATTCGAAGAGCGACGACGTAGTTTTCTACTCTTCAGAATCTGAATCGGACGAGGTTGAGGGGAAAGTA TTCCGGCGGACGAGATCGGAGAATCTGCAGAGGAGGCGGGGAGAGAAGAAGAAGCTGCAGAGGTCTGAGACGGAGAAAAGCTGGAAAGCGGTGAAGTCGA GGGAAGAAAGAGAGGAGGAGGAGCTGAGCGACGAGGAGTTCCAGCGGGCGGTGGAAGAGTTCATCGCCAAGAATTTGAGGCTTCGCCGGCAAGAGACTTT GGGAGTTGTGCCGAGGAGCTCGGTGGCCCAATTCGAGCTGAGGAGTGAAATAGTAATTAATTAA
AA sequence Show only first row Show all	>Lus10041775 pacid=23146603 polypeptide=Lus10041775 locus=Lus10041775.g ID=Lus10041775.BGIv1.0 annot-version=v1.0 MDSSDFEVHLKSQKSTAHVFRYYHYGRHLRGFRTAFRAVEFLAALLLFLWMFTHLPIAVQISAAFFRRLATVIESPPFVFLICNAIIVTLIVKPGRFASE NPAEAKNADDDLYGEILKNAESSFQKTIPELPLHTPLPDAAEPETDTADVFEDKEIIVSPIKSIAPHQVGACETEDADSKSDDVVFYSSESESDEVEGKV FRRTRSENLQRRRGEKKKLQRSETEKSWKAVKSREEREEEELSDEEFQRAVEEFIAKNLRLRRQETLGVVPRSSVAQFELRSEIVIN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G66440			unknown protein		Lus10041775 [exp]	0	1
AT5G51520			Plant invertase/pectin methyle...		Lus10031712 [exp]	1.7	0.9557
AT3G22830	HSF	AT-HSFA6B	ARABIDOPSIS THALIANA HEAT SHOC...		Lus10000049 [exp]	2.4	0.9517
AT4G09720		AtRABG3a	RAB GTPase homolog G3A (.1.2.3...		Lus10006059 [exp]	2.6	0.9344
AT1G75240	ZF_HD	ATHB33, ZHD5	zinc-finger homeodomain 5, hom...		Lus10031315 [exp]	3.2	0.9525
AT3G01490			Protein kinase superfamily pro...		Lus10022227 [exp]	4.7	0.9237
AT2G17080			Arabidopsis protein of unknown...		Lus10023959 [exp]	4.8	0.8998
AT1G08570		ACHT4	atypical CYS HIS rich thiored...		Lus10015711 [exp]	5.3	0.9203
AT1G05010		ACO4, EAT1, EFE	ethylene forming enzyme, ethyl...		Lus10015153 [exp]	5.5	0.9366
AT5G66440			unknown protein		Lus10028329 [exp]	5.7	0.8921
AT2G26700		PID2	PINOID2, AGC (cAMP-dependent, ...		Lus10013715 [exp]	5.9	0.9384

Compare expression of checked genes

Lus10041775 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.