Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G75420 641 / 0 UDP-Glycosyltransferase superfamily protein (.1) AT1G19710 609 / 0 UDP-Glycosyltransferase superfamily protein (.1) AT1G52420 171 / 2e-46 UDP-Glycosyltransferase superfamily protein (.1) AT3G15940 109 / 3e-25 UDP-Glycosyltransferase superfamily protein (.1.2) AT1G78800 49 / 4e-06 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028338 [exp] 896 / 0 AT1G75420 642 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10024281 [exp] 655 / 0 AT1G75420 689 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10011469 [exp] 166 / 2e-44 AT1G52420 765 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10037523 [exp] 162 / 1e-42 AT1G52420 770 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10037008 [exp] 49 / 5e-06 AT1G78800 665 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10015797 [exp] 44 / 0.0002 AT1G78800 652 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G118800 [exp] 720 / 0 AT1G75420 654 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.002G031300 [exp] 632 / 0 AT1G75420 644 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G179000 [exp] 109 / 4e-25 AT3G15940 794 / 0.0 UDP-Glycosyltransferase superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00534 [flax] [poplar] Glycos_transf_1 Glycosyl transferases group 1
Representative CDS sequence Show only first row Show all	>Lus10041786 pacid=23146714 polypeptide=Lus10041786 locus=Lus10041786.g ID=Lus10041786.BGIv1.0 annot-version=v1.0 ATGGCAGCTAATCGTGGGAATAAAGCAGCAGAGATGGCCAAACACTCTCTCGGCTGGCCTTTTAAGAGATGGCTACTGGCCATGTTAATCATGCTATCAA TCTCGACTGTCATCGCTTTCTTTATCAGGGCCGCCTTCGACTCTTGTGATCGTCGCTTCGAAGTTGCTCAGAAATGGGTTCCTTCTTCCGGGAATGCGAA GACGCCTCCGGTGCCGATTACGAAGGCGCCTCCTCCCAGTCCCCTCAGCTTTACGAAATCGAAACGAGTGCTTTTGGTCTCCCATGAACTTTCCCTTTCT GGTGGGCCATTGTTGCTCATGGAACTAGCATTTCTACTAAGGAGTGTGGGTGCTGGAGTTTTCTGGATAACCGTCCAAAAACCTATGCAGACTGATGAGG TAATATACAGTTTGGAGCAGAAGATGTTGGTCCGAGGAGTGCAGGTAATATCAGCGAAGGGAGAGGAAGCTATAGATGCAGCTCTAAAAGCTGATCTGGT TGTTCTGAATACTGCTGTTGCTGGGAAATGGCTGGATCCTGTTCTTAAGGAAAACGTTTCTCGAGTGCTTCCAAAGGTGTTGTGGTGGATCCATGAGATG CGGGGACACTATTTTAAACTGGAGTATCTTAACCATCTTCCTTCGGTAGCTGGTGCTATGATTGATTCACATGTCACTGCAGAATACTGGAAGAATCGAA CTAAAGAGCGTTTGTGGATTAACATGCCCATCACTTATGTTGTTCACCTTGGCAATAGCAAAGAGCTTATGGAGGTTGCGGAAGATAGTGTGGCAAAGAG GGTTTTGCGTGAGCACATCCGAGAGTCTCTTGGATTGCGCGATGAAGATTTATTGTTTGGCATTATAAACAGTGTTTCACGTGGTAAAGGGCAAGATCTG TTTCTACGTTCCTTCTACGAAAGTTTACAACTTATCCGCAACAAGAAGTTACAGGTGCCATCTGTGCATGCTGTAATTGTAGGGAGTGACATGGGTGCTC AAACCAAGTTCGAAACAGAATTGCGGAACTATGTAATCCAGAAAAGGATTGAACACCGTGTTCACTTTGTGAATAAGACCCTGACAGTTGCTCCTTATCT AGCTGCAATCGATGTTCTTGTTCAGAATTCTCAGGCCCGTGGAGAATGCTTCGGGAGGATAACCATCGAAGCCATGGCATTTCAGTTGCCTGTCCTGGGA ACTGCAGCTGGGGGCACGACAGAGATAGTTGTAAATGGAACTACTGGTTTGTTGCATCAAGTCGGGAAACAAGGGGTTTTGGCACTTGCGAAAAACATGG TGAAAGTTTCGACTCAGGTAGAGAGGAGGCTAACAATGGGGAAGAGAGGGTATCAGCGTGTTAAAGAGAGGTTCCTAGAGCATCACATGGCACATAGAAT CGCTGATGTGCTCAAGGACATACTGAGGAAGGCATCAAAGGATCATCAACATGGTCATAAAACTTAA
AA sequence Show only first row Show all	>Lus10041786 pacid=23146714 polypeptide=Lus10041786 locus=Lus10041786.g ID=Lus10041786.BGIv1.0 annot-version=v1.0 MAANRGNKAAEMAKHSLGWPFKRWLLAMLIMLSISTVIAFFIRAAFDSCDRRFEVAQKWVPSSGNAKTPPVPITKAPPPSPLSFTKSKRVLLVSHELSLS GGPLLLMELAFLLRSVGAGVFWITVQKPMQTDEVIYSLEQKMLVRGVQVISAKGEEAIDAALKADLVVLNTAVAGKWLDPVLKENVSRVLPKVLWWIHEM RGHYFKLEYLNHLPSVAGAMIDSHVTAEYWKNRTKERLWINMPITYVVHLGNSKELMEVAEDSVAKRVLREHIRESLGLRDEDLLFGIINSVSRGKGQDL FLRSFYESLQLIRNKKLQVPSVHAVIVGSDMGAQTKFETELRNYVIQKRIEHRVHFVNKTLTVAPYLAAIDVLVQNSQARGECFGRITIEAMAFQLPVLG TAAGGTTEIVVNGTTGLLHQVGKQGVLALAKNMVKVSTQVERRLTMGKRGYQRVKERFLEHHMAHRIADVLKDILRKASKDHQHGHKT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G75420			UDP-Glycosyltransferase superf...		Lus10041786 [exp]	0	1
AT1G75420			UDP-Glycosyltransferase superf...		Lus10028338 [exp]	12.6	0.8162
AT1G68930			pentatricopeptide (PPR) repeat...		Lus10030581 [exp]	20.0	0.7193
AT4G22285			Ubiquitin C-terminal hydrolase...		Lus10003795 [exp]	26.2	0.7300
AT5G06160		ATO	ATROPOS, splicing factor-relat...		Lus10019024 [exp]	42.3	0.7223
AT1G53720		ATCYP59, CYP59	cyclophilin 59 (.1)		Lus10031772 [exp]	58.0	0.7172
AT4G10925			Nuclear transport factor 2 (NT...		Lus10032407 [exp]	86.5	0.6791
AT5G19950			Domain of unknown function (DU...		Lus10043254 [exp]	170.9	0.6643
AT3G27170		ATCLC-B, CLC-B	chloride channel B (.1)		Lus10012526 [exp]	174.9	0.6676
AT3G48120			unknown protein		Lus10004240 [exp]	205.7	0.6634
AT4G14180		ATPRD1	putative recombination initiat...		Lus10022584 [exp]	211.2	0.6536

Compare expression of checked genes

Lus10041786 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.