Lus10041856 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10041856 pacid=23147000 polypeptide=Lus10041856 locus=Lus10041856.g ID=Lus10041856.BGIv1.0 annot-version=v1.0
ATGGACGTCCGATTCCCATTCTCGCCGGCGGAAGTCGCCAAAGTCCGATGCGTTCAGTTTGGCATCCTCAGCCCTGACGAGATTAGGCAAATGTCCGTTG
TCCAGATTGAGCATAGTGAGACTACAGAACGGGGAAAGCCCAAGATAGCCGGTCTCAGTGATCCTCGGTTGGGAACAATTGACAGGAAAATGAAGTGTGA
GACTTGTGCTGCGAACATGGCGGAATGTCCTGGGCACTTTGGACACCTGGAGCTTGCCAAACCCATGTATCATGTTGGGTTCATGAAGACTGTGCTTGCC
ATAATGAGATGTGTTTGCTTCAATTGTTCGAAGATTCTTGTTGACGAGGATGATCACAAATTTAAACAAGCCATGAAAATAAGAAACCCAAAAAACAGAC
TTAGAAAGATTCAAGAAGCTTGCAAAAACAAGAAGAAGTGTGAAGGTGGGGATGAAATCGAGTCCCAGAATCAAGATGATGATGCACCACTGAAGAAGAG
CCGTGGTGGTTGTGGCGCTAATCAACCAAATATTACAATTGAAGGTATGAAGATGAATGCCGAATTTAAGCAACAAAAGAAGAAAAGTGATGACCAGGAC
CAAATGCCTGAACCCGTGGAGAGGAAACAGACACTTACAGCAGAAAGAGTCCTTAGTGTTCTCAAGCGAATAAGTGATGAGGATTGCCTACTTTTGGGGC
TGAATCCTAAGTATGCACGTCCAGACTGGATGATCCTTCAAGTTCTTCCAATTCCACCACCTCCTGATGATCTTACTCATCAGCTGGCTATGATTATCAG
ACACAATGAGCATCTAAGAAGACAGGAATCGAGTGGGGCTCCTGCACACATCATATCTGAATATGCACAATTGCTGCAATTTCACGTTGCCACTTATTTC
GACAATGAGTTGCCTGGACAGCCAAGGGCTACTCAGAGATCAGGGAGACCGATCAAATCAATATGCAGTCGGCTTAAGGCTAAAGAGGGTCGTATTAGGG
GCAACTTAATGGGAAAACGTGTTGACTTCTCTGCTCGTACAGTCATTACTCCTGATCCTACCATCAACATTGATCAACTTGGAGTACCATGGAGTATTGC
CTTGAATCTCACTTATCCCGAAACTGTTACTCCATATAACATTGAAAGACTAAAGGAACTTGTTCAAAATGGACCCCATCCTCCTCCTGGTAAAACTGGT
GCCAAATATATAATAAGGGATGATGGTCAGAGACTTGACCTTCGGTACCTGAAGAAAAGTAGTGATAATCATCTCGAGCTAGGTTACAAGGTTGAGCGGC
ATTTAAATGATGGGGACTTTGTTCTTTTCAATCGACAACCTAGTCTCCATAAAATGTCCATCATGGGTCACCGAATAAAGATCATGCCATATTCAACTTT
CCGCTTGAACTTGTCCGTTACTTCTCCATATAATGCTGACTTCGATGGCGATGAAATGAATATGCACGTGCCACAATCATTTGAAACCCGAGCTGAAGTG
TTGGAGCTAATGATGGTGCCAAAGTGCATTGTTTCCCCTCAGGCTAACAGGCCTGTCATGGGAATTGTGCAGGACTCGCTCTTGGGATGTCGCAAGATTA
CCAAGAGGGATACTTTTATTGAGAAAGATGTTTTCATGAATATCTTAATGTGGTGGGAAGATTTTGATGGGAAAGTGCCTGCTCCAACTATTTTGAAGCC
AAGGCCACTCTGGACTGGGAAGCAAGTCTTCAATCTTATCATACCAAAGCAGATCAATTTGATTAGGTTTTCTGCTTGGCACACTGATTCAGAAAGGGGA
GTTCTTACCCCTGGAGACACTATGGTTCGGATTGAGAAGGGAGAGTTGCTCTCTGGAACCCTTTGCAAGAAGACTCTTGGAGCTTCTAGTGGAAGTTTGA
TTCATGTTGTCTGGGAAGAAGTGGGTCCTGATGCTGCGAGGAAGTTTCTGGGACACACCCAGTGGCTTGTGAATTATTGGCTTTTGCAACAAGGTTTTAG
TATTGGGATTGGAGATACAATTGCTGATGCTTCTACAATGGAAAAAATTAATGAAACTATTTCAGAAGCCAAAAACAAGGTGAAAGAACTTATCAGAGCC
TTACGTGATAAGGATTTAGAGCCTGAACCTGGGCGGACTATGAATGAATCATTTGAAAACAAAGTGAATCAGGTCTTGAACAAAGCTCGTGATGATGCTG
GAAGTAGTGCACAGAGAAGTTTATCAGAGAGCAATAATCTGAAGGCAATGGTTACTGCAGGATCAAAAGGGAGTTTTATTAATATCTCCCAAATGACTGC
TTGTGTGGGTCAGCAAAATGTTGAAGGGAAACGAATACCATATGGTTTTGTTGAAAGGACTTTGCCCCACTTTTTAAAGGAGGACAAGGGACCTGAAAGT
CGAGGATTTGTAGAGAACTCATACCTCCGTGGATTGACACCTCAAGAGTTCTTTTTTCATGCTATGGGAGGTAGGGAGGGTCTCATTGATACTGCAGTGA
AAACATCTGAGACTGGATACATACAGAGGCGGCTAGTGAAAGCTATGGAAGATATAATGGTGAAGTATGATGGTACTGTTCGGAACTCTTTGGGGGATGT
CATTCAGTTCCTTTACGGTGAAGATGGCATGGATGCTGTCTGGATTGAATCACAGAAGTTAGATTCATTGAAGATGAAACAAGCAGAGTTTGATAAGGTC
TTCCGGTATGAAATTGATGATGAAAACTGGAATCCTAGCTACATGTTGCCTGAACATGTTGAGGATTTAAAGAATATCCGAGAATTGAGGGATGTGTTTG
ATGCTGAAGTTGCAAAGCTTGAAGGGGACAGGCTGCAACTTGGTACCGAAATTGCCACCACTGGTGACACCTCGTGGCATTTGCCAGTTAACCTAATGAG
GCTAATCTGGAATGCTCAGAAGACATTTAAGGTTGATACGAGGAAGGCTTCCGATATTCACCCAATGGAGGCTGTTGAAGCTGTTGATAAGCTGCAGGAA
AGGTTAAAAGTTGTTCCTGGTGATGATCCGTTGAGTGTGGAAGCTCAGAAAAATGCTACTCTCTTCTTTTCAATCTTGCTCCGTAGCACACTGGCAAGTA
AGAGGGTGCTACAGGAATACAGGCTCAGCCGTGAAGCTTTTGATTGGGTTATTGGTGAAATAGAGTCCCGTTTCTTGCAATCACTGGTGGCACCAGGCGA
AATGATTGGTTGTGTTGCAGCGCAGTCCATTGGAGAGCCTGCTACTCAGATGACTCTGAATACTTTTCACTATGCTGGTGTTAGTGCAAAGAATGTCACC
CTTGGTGTTCCCAGGTTGAGGGAGATTATTAACGTAGCTAAGAACATAAAGACCCCATCTCTTTCTGTTTTTCTTCACTCTGACTGTAGCCAGACAAAGG
AGAGAGCTAAAAATGTGCAATGTGCCCTGGAGTATACTACGCTGCGGAGTGTTACACAGGCTACAGAAGTTTGGTATGACCCGGATCCTACAAGTACAAT
CATTGAAGAAGATGCTGATTTCGTGAGATCTTATTATGAGATGCCAGATGAAGAGGTTGCACCTGAAAAGATATCTCCTTGGCTGCTCCGCATAGAGTTG
AATCGTGAAATGATGGTTGATAAGAAGCTGAACATGGCTGACATTGCAGCCAAAATCAATCAAGAGTTCGACGATGATTTAACTTGCATTTTCAATGATG
ACAATGCTGAAAAACTCATTCTTCGTATCCGTATCATGAATGATGAAGCCCCGAAGGGGGAGTTAGATTCTTCAGCTGAAGATGATGTTTTCTTGAAGAG
AATTGAGAGTAACATGCTGACGGAAATGTCTCTAAGAGGTATTCCAGATATCAACAAAGTCTTCATTAAACATGGTAAAGTAAGCAAGTTTGATAAGAAC
GAGGGGTTTAGAACAGCGGAGGAGTGGATGCTGGATACAGAAGGTGTCAATCTCTTGGCAGTCATGTGCCATGAAAGTGTTGATGCCCAAAGGACAAGCA
GCAATCACTTGATCGAAGTAATTGAAGTGATTGGTATTGAGGCCGTACGACGTTCTCTCCTGGACGAGCTGCGTGTTGTTATATCTTTCGATGGATCATA
TGTGAACTACAGGCATCTTGCTATATTGTGTGATACCATGACATATAGAGGTCATTTAATGGCAATTACCCGGCAGCGTGCGCATTTTTCACCCTGCGTT
GGTGGGATGGAATTTCCCCCGGCTTCATCGCCGGGATACAGTCCGTCATCTCCAGGATACAGCCCCTCTTCTCCTGGGTACAGCCCCACATCTCCTGGGT
ACAGCCCAACCTCTCCGGGATACAGTCCTACATCGCCGACTTATAGTCCGAGCTCTCCCGGCTATAGCCCGACAAGTCCGGCCTATTCTCCTACAAGCCC
ATCGTACTCTCCGACGTCTCCAAGCTATAGCCCGACGTCTCCGAGCTATAGCCCGACGTCTCCGAGCTATAGCCCGACGTCTCCAAGCTATAGCCCGACG
TCTCCGGCTTACAGCCCGACATCGCCAGCTTACAGCCCGACATCTCCAAGCTACAGCCCGACATCTCCTAGCTACAGCCCGACATCTCCTAGCTACAGCC
CTACGTCTCCTAGCTACAGCCCGACGTCTCCTAGCTACAGCCCGACTTCACCAGCATATAGCCCGACTTCGCCGGGCTACAGCCCAACGTCGCCGAGCTA
TAGCCCGACTTCACCAAGTTACAATCCACAGTCGGCAAAGTACAGTCCCTCGGTTGCATATTCACCAAGCAGTCCCAGATTATCTCCAGCTAGTCCTTAC
AGTCCTACCTCCCCAAGCTACAGTCCGACGTCGCCGTCATACTCGCCGACATCTCCATCGTATTCCCCATCGAGCCCGGCGTACAGTCCCAGCAGTCCTT
ATAATTCAGCTGTGATTCCGGATTACAGCCCAAGCTCCCCTCAGTACAGCCCAAGTGCAGGATATTCACCAAGTGCGCCGGGGTACTCACCTTCATCTAC
GGGTCAGTACACGCCTCAGCCAAGTGCCAAGGGTGACGGGAAAGATGATAATGGCAAAAAAGAGAACATAACAGAGGGTATTCTGGGTTATGGAATGTGG
AGCCAGCTGGAACGAAAGGGGAAGACCCATAACCCATCATTGTTTCTGGTAGTTGGAACTCAGCAAGCACGTAAACCGATCTTTCGAAGGGCGGTCAGAG
CACCGTCTTTGGTCCCTAACGAAGCTCGAAGGACGCGAAGAGGGAGCTTTGACAGGCGGGAACCTGCCTCCCCGAGAATTACCTGCCTTGGAGAAATCAA
GGACGAGAAGATCAAGCAGCAGCAACAGGAGAAGGATGAAGGGCGAGAATCAAGATTCGGGTCTTGTTTCGGTGAGATGATTCACATTATGAAGGAGAAG
GGAAAGCTGAGGAAACAAAGTGGCGAGGAAGAAAAAGACGGCGGTGTCTGGGATGGTGATAAGCATCAGGAGAAGCAGTCATCATCCTTGGGTGTGGTTC
CGGAGAAGAGTAATGTGCCAACGTTGGGGGAGTTGAGGCTATACACAAGTGGCCGCAGAGAGCTGCAGAGTTTCGATTGGAGAATAGCTGCAGTTACGTC
GAGGGATGACATGTCGAGGGGATAA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10041856 pacid=23147000 polypeptide=Lus10041856 locus=Lus10041856.g ID=Lus10041856.BGIv1.0 annot-version=v1.0
MDVRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETTERGKPKIAGLSDPRLGTIDRKMKCETCAANMAECPGHFGHLELAKPMYHVGFMKTVLA
IMRCVCFNCSKILVDEDDHKFKQAMKIRNPKNRLRKIQEACKNKKKCEGGDEIESQNQDDDAPLKKSRGGCGANQPNITIEGMKMNAEFKQQKKKSDDQD
QMPEPVERKQTLTAERVLSVLKRISDEDCLLLGLNPKYARPDWMILQVLPIPPPPDDLTHQLAMIIRHNEHLRRQESSGAPAHIISEYAQLLQFHVATYF
DNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVQNGPHPPPGKTG
AKYIIRDDGQRLDLRYLKKSSDNHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV
LELMMVPKCIVSPQANRPVMGIVQDSLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLIRFSAWHTDSERG
VLTPGDTMVRIEKGELLSGTLCKKTLGASSGSLIHVVWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADASTMEKINETISEAKNKVKELIRA
LRDKDLEPEPGRTMNESFENKVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFVERTLPHFLKEDKGPES
RGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKQAEFDKV
FRYEIDDENWNPSYMLPEHVEDLKNIRELRDVFDAEVAKLEGDRLQLGTEIATTGDTSWHLPVNLMRLIWNAQKTFKVDTRKASDIHPMEAVEAVDKLQE
RLKVVPGDDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVT
LGVPRLREIINVAKNIKTPSLSVFLHSDCSQTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTIIEEDADFVRSYYEMPDEEVAPEKISPWLLRIEL
NREMMVDKKLNMADIAAKINQEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELDSSAEDDVFLKRIESNMLTEMSLRGIPDINKVFIKHGKVSKFDKN
EGFRTAEEWMLDTEGVNLLAVMCHESVDAQRTSSNHLIEVIEVIGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRQRAHFSPCV
GGMEFPPASSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYNPQSAKYSPSVAYSPSSPRLSPASPY
SPTSPSYSPTSPSYSPTSPSYSPSSPAYSPSSPYNSAVIPDYSPSSPQYSPSAGYSPSAPGYSPSSTGQYTPQPSAKGDGKDDNGKKENITEGILGYGMW
SQLERKGKTHNPSLFLVVGTQQARKPIFRRAVRAPSLVPNEARRTRRGSFDRREPASPRITCLGEIKDEKIKQQQQEKDEGRESRFGSCFGEMIHIMKEK
GKLRKQSGEEEKDGGVWDGDKHQEKQSSSLGVVPEKSNVPTLGELRLYTSGRRELQSFDWRIAAVTSRDDMSRG
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10041856 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.