Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 351 / 7e-114 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT1G26700 318 / 4e-101 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT5G53760 314 / 2e-99 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT4G02600 269 / 8e-83 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 242 / 5e-73 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT1G61560 236 / 1e-69 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G39200 229 / 2e-67 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT2G33670 228 / 2e-67 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 227 / 2e-67 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT1G11310 228 / 6e-67 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028440 [exp] 1077 / 0 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10001370 [exp] 313 / 8e-100 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10032669 [exp] 287 / 3e-89 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10043085 [exp] 279 / 5e-86 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10040388 [exp] 247 / 1e-73 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10012698 [exp] 243 / 2e-73 AT1G11000 305 / 2e-97 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10026276 [exp] 237 / 1e-70 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 239 / 2e-70 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10001336 [exp] 235 / 6e-70 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G111400 [exp] 526 / 0 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.004G218500 [exp] 365 / 3e-119 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 317 / 8e-101 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 281 / 5e-87 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 255 / 1e-77 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.007G064200 [exp] 249 / 9e-75 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 244 / 1e-72 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064300 [exp] 242 / 6e-72 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 239 / 6e-71 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G099200 [exp] 236 / 8e-70 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10041893 pacid=23146850 polypeptide=Lus10041893 locus=Lus10041893.g ID=Lus10041893.BGIv1.0 annot-version=v1.0 ATGGTGGATTATGGGGAAATGGCTTTGGCTTTGACCCCTACTTGGGCTGTTGGGACTGTAGTCACAGTTATGATTGCTTTTGGTTTCTTCTTCCAACGCC TTCTCAAGTATTTTGGAGAGTTTTTGCACCGAACCAAGAGGAAGGCTTTATTATCAGCTCTCTACAAGATCAAAGATGAATTGGTTCTATTTGGCCTAAT TTCGTTGCTGATGGGTCACTGGCTCGCTTTGGTGGCCAAAATCTGTGTCAAAACGACATATTTGAACAGCCGGTTTTACTTCTGTGACTTGAAGAAAGCT TCAAACTTTAATCGTATGGTTGCTTCAGTTTCACATCAGATTAACAACAACACAGTTGTTAGGGATAGGGAGTTTCATTCGGAGTCCATTCGTGGACATT GTCCACCGGGACATGAATCATTTGCTTCACATGATAGTCTTGAGCAGCTTCATCGTTTGATGTTTGTTCTTGCTGTGACCCATGTTTCCTACAGCTTTGC TGCAATTGCCCTGGCTATGATCAAGACTCATTTGAAGCTTCATCCCACAAAAGAAAAATGGGCAGACTATCCACATTTATTCTTCATCATACAACACATC CCTGGAGCCAGCACAAATTCCTTGTTTGGGTGCCGCCAATTCTGGACTTCTATAACCAATGCTGATTACATGGCATTGCGTCTAGGGTTCATTACGACAC ACCAACTACCTTTAGTATATGATTTCCATAATTATATGCTCCGAAGCATGGAGGAGGAATTCTCCGACATAGTTGGCATTAGTCTGCCCCTCTGGTTTTA CGCCATAGTCTGTGTCTTCCTGGACTTCCATGGAACACAAATCTACTTTTGGCTTTCTTTTCTTCCAGTCATTTTAGTCCTTGTGATTGGCACCAAGCTG CACCGAATAGTGGTGAGATTGGCTGTCGAAATCAGGGATGCCTGCCAAACTTCAGGACATCACCGGTTCAACCTGAGAGATGAGCTGTTCTGGTTTCGGA AACCTCGATTGCTTCTTTGGTTGATACAATTAGTATCCTTCCAGAATGCATTTGAGATGGCAACATTTTTATGGTCCTTGTGGGAAGTTAAAGATACTTC ATGTTTCATGTCAAACAAGAGTTTTGTCATCGTTCGTTTAGTATCTGGGGTGGTCTCACAAATCTGGTGCAGCTTCATCACTTTCCCACTCTACGTAATC GTCACACAGATGGGCGGGAGGTTCAAAAGGACAGTAGTATCAGAGAACGTGTGGAGATCACTCCATGGATGGCAAAGAAGAGTAAAGGCCAGGAGGAGTC CTTACAGCCAATTAGAAAGCGACAGAGTCACAATCAGAACCTCCAGTTCACGAGCAAGCAGCAGCAGGAAACTGCAGAAGAAATCTAATGGCTCAAGCAA GAGAACCGAAAGAGCCAACAGCAGAAGCAGGAGATTGGTGGAAGAACAACAATTGTCAGAAGCATCCCTGCTCCATCACCAGCTGGATCCTTCAAGCTCA CCACCAGCTGAAACTGATTCCATTTATGCCAGTGGAAGAGTTGTTGCCTATGGTGATAATAACAGTACGGATGAGATTGTTGAGCTTCCAATTACTTGCT CTCAGCCTCCTTCCAGCAGGCTCAGTGAAGATCACTTCTTTAGCTATAGGTCTGATGATAATGATTATGACTATGGCGATGATGATCATGGTTATGAAAC TGATGCAACTGTTCCTTCCTTTGATGGTTACGGTTATTACGACATTGACGATGATCATCAACTGCATAATCATGATCCTCCACCGTATAGTGGATACTAG
AA sequence Show only first row Show all	>Lus10041893 pacid=23146850 polypeptide=Lus10041893 locus=Lus10041893.g ID=Lus10041893.BGIv1.0 annot-version=v1.0 MVDYGEMALALTPTWAVGTVVTVMIAFGFFFQRLLKYFGEFLHRTKRKALLSALYKIKDELVLFGLISLLMGHWLALVAKICVKTTYLNSRFYFCDLKKA SNFNRMVASVSHQINNNTVVRDREFHSESIRGHCPPGHESFASHDSLEQLHRLMFVLAVTHVSYSFAAIALAMIKTHLKLHPTKEKWADYPHLFFIIQHI PGASTNSLFGCRQFWTSITNADYMALRLGFITTHQLPLVYDFHNYMLRSMEEEFSDIVGISLPLWFYAIVCVFLDFHGTQIYFWLSFLPVILVLVIGTKL HRIVVRLAVEIRDACQTSGHHRFNLRDELFWFRKPRLLLWLIQLVSFQNAFEMATFLWSLWEVKDTSCFMSNKSFVIVRLVSGVVSQIWCSFITFPLYVI VTQMGGRFKRTVVSENVWRSLHGWQRRVKARRSPYSQLESDRVTIRTSSSRASSSRKLQKKSNGSSKRTERANSRSRRLVEEQQLSEASLLHHQLDPSSS PPAETDSIYASGRVVAYGDNNSTDEIVELPITCSQPPSSRLSEDHFFSYRSDDNDYDYGDDDHGYETDATVPSFDGYGYYDIDDDHQLHNHDPPPYSGY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10041893 [exp]	0	1
AT2G24800			Peroxidase superfamily protein...		Lus10026903 [exp]	2.0	0.9257
AT2G27385			Pollen Ole e 1 allergen and ex...		Lus10020642 [exp]	2.0	0.9267
AT1G12330			unknown protein		Lus10024559 [exp]	2.6	0.9033
					Lus10035486 [exp]	3.0	0.9186
AT5G63900			Acyl-CoA N-acyltransferase wit...		Lus10000368 [exp]	4.5	0.9159
AT1G12570			Glucose-methanol-choline (GMC)...		Lus10017827 [exp]	6.7	0.8769
AT1G12330			unknown protein		Lus10032197 [exp]	7.1	0.8547
AT5G41070		DRB5	dsRNA-binding protein 5 (.1)		Lus10035176 [exp]	7.1	0.9156
AT1G63260		TET10	tetraspanin10 (.1.2.3)		Lus10002230 [exp]	9.2	0.8727
AT4G04890	HD	PDF2	protodermal factor 2 (.1)		Lus10007650 [exp]	9.2	0.9099

Compare expression of checked genes

Lus10041893 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.