Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017982 [exp] 98 / 4e-25 AT1G14590 200 / 4e-60 Nucleotide-diphospho-sugar transferase family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041974 pacid=23153680 polypeptide=Lus10041974 locus=Lus10041974.g ID=Lus10041974.BGIv1.0 annot-version=v1.0 ATGAAAATTCCGGCGGAACCACTGTCGTCGGAAAACGGCGGCGGAGATCAGCGCAGTTGTCGTTTCCTCATGATCATCAGGTCGGAAATCTTGGCCGCCT TCTTCCTGGGTGTCGTTTTGTGCTGCACCGTCCTCTTCGCCTCCCTCTACGCGTCTTCTGCTTCTTCGCCTGAGTTACTGCTCTCCTTTTCTCCGGCCGG CCTTCAGAAGTCGTCACCACCGCCGAAGACCAAACAGAAGAGCAATAACACCATCCTCGACGACCCAAAGCTAATAAGAGTACTCCAGAAAGCAACCAAA ACAGCCACACCACAAGAACTATCATTGATCCTCGGCTACGAAAGAACTCGGTAA
AA sequence Show only first row Show all	>Lus10041974 pacid=23153680 polypeptide=Lus10041974 locus=Lus10041974.g ID=Lus10041974.BGIv1.0 annot-version=v1.0 MKIPAEPLSSENGGGDQRSCRFLMIIRSEILAAFFLGVVLCCTVLFASLYASSASSPELLLSFSPAGLQKSSPPPKTKQKSNNTILDDPKLIRVLQKATK TATPQELSLILGYERTR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10041974 [exp]	0	1
AT2G32235			unknown protein		Lus10008093 [exp]	2.0	0.8558
AT1G76510	ARID		ARID/BRIGHT DNA-binding domain...		Lus10026569 [exp]	3.5	0.8470
AT5G55410			Bifunctional inhibitor/lipid-t...		Lus10016582 [exp]	4.0	0.8375
AT5G46490			Disease resistance protein (TI...		Lus10042465 [exp]	8.0	0.8108
AT3G52970		CYP76G1	"cytochrome P450, family 76, s...		Lus10021135 [exp]	13.0	0.8705
					Lus10017936 [exp]	13.7	0.7850
AT1G77260			S-adenosyl-L-methionine-depend...		Lus10000973 [exp]	33.3	0.8279
AT5G09360		LAC14	laccase 14 (.1)		Lus10041066 [exp]	38.4	0.7930
AT1G02205		CER1	ECERIFERUM 1, Fatty acid hydro...		Lus10023109 [exp]	48.8	0.8090
AT5G26650	MADS	AGL36	AGAMOUS-like 36 (.1)		Lus10016180 [exp]	51.2	0.7398

Compare expression of checked genes

Lus10041974 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.