Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G18570 96 / 2e-25 Oleosin family protein (.1) AT1G48990 76 / 1e-17 Oleosin family protein (.1) AT4G25140 58 / 9e-11 OLE1, OLEO1 oleosin 1 (.1) AT2G25890 58 / 9e-11 Oleosin family protein (.1) AT5G51210 45 / 3e-06 OLEO3 oleosin3 (.1) AT3G27660 44 / 1e-05 OLE3, OLEO4 OLEOSIN 3, oleosin 4 (.1) AT5G40420 44 / 2e-05 OLE2, PA23, OLEO2 oleosin 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017992 [exp] 247 / 2e-84 AT3G18570 136 / 4e-41 Oleosin family protein (.1) Lus10032461 [exp] 114 / 3e-32 AT3G18570 142 / 1e-43 Oleosin family protein (.1) Lus10042957 [exp] 112 / 3e-31 AT3G18570 139 / 2e-42 Oleosin family protein (.1) Lus10031387 [exp] 64 / 3e-13 AT4G25140 164 / 1e-52 oleosin 1 (.1) Lus10027161 [exp] 64 / 4e-13 AT4G25140 154 / 3e-48 oleosin 1 (.1) Lus10010943 [exp] 64 / 8e-12 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10039683 [exp] 60 / 2e-11 AT4G25140 159 / 2e-50 oleosin 1 (.1) Lus10028822 [exp] 56 / 2e-10 AT4G25140 146 / 3e-46 oleosin 1 (.1) Lus10017460 [exp] 56 / 4e-10 AT4G25140 136 / 9e-42 oleosin 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G059400 [exp] 107 / 2e-29 AT3G18570 113 / 4e-32 Oleosin family protein (.1) Potri.001G080000 [exp] 56 / 3e-10 AT4G25140 108 / 1e-30 oleosin 1 (.1) Potri.006G234900 [exp] 56 / 5e-10 AT2G25890 113 / 1e-32 Oleosin family protein (.1) Potri.018G057800 [exp] 54 / 3e-09 AT2G25890 91 / 5e-24 Oleosin family protein (.1) Potri.003G150600 [exp] 52 / 1e-08 AT4G25140 124 / 3e-37 oleosin 1 (.1) Potri.015G081901 [exp] 48 / 4e-07 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.T125308 [exp] 48 / 4e-07 AT5G40420 108 / 5e-30 oleosin 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01277 [flax] [poplar] Oleosin Oleosin
Representative CDS sequence Show only first row Show all	>Lus10041987 pacid=23153688 polypeptide=Lus10041987 locus=Lus10041987.g ID=Lus10041987.BGIv1.0 annot-version=v1.0 ATGGCTGACCACCGTCCCACCGTAGGCTCAGCACGCTCCACGCGCCCACCAACCTCCCCATCACTCACCACCGCCGCTGCCACCTCCTCCGGCCACCCAA CCACCTCCGCAGCCGCCGCGTTCCTCCACAGACTCCAAACTTTAATCCAGCGACATGCACCGGGAAACACCGCCTCCACCCAGCTCATCGGCCTACTAAC TCTCTTCATCACCGCCTCCGTCCTCCTCCTCCTCACCGGAGCCACCGTCGCCGTATTCATCGTCTTCCTCATCTTCCTCGCCCCGATCCTCATCGTCTTC AGCCCCATCTGGGTCCCGGTAGCCACGCTCCTCTTCGTCCTGGTCACCGGGTTCCTGACGTTCGCCGGGTTCGTGGTGGCTATGGTCGGAGGGCTGTCGT GGGGGTATCGGTACTACCAAGGGATGAACCCGGTCGGGTCGGACCGGTTTGATTACGCCAGAGAGAGGATTTCGGATACGGCCGGGGCGGTCAAGGAGTA TGCTAGGGGGTATGGTGGGTATTTCCAGAGTAAGGTCAAGGATGCGGCTCCAGGTGCTTGA
AA sequence Show only first row Show all	>Lus10041987 pacid=23153688 polypeptide=Lus10041987 locus=Lus10041987.g ID=Lus10041987.BGIv1.0 annot-version=v1.0 MADHRPTVGSARSTRPPTSPSLTTAAATSSGHPTTSAAAAFLHRLQTLIQRHAPGNTASTQLIGLLTLFITASVLLLLTGATVAVFIVFLIFLAPILIVF SPIWVPVATLLFVLVTGFLTFAGFVVAMVGGLSWGYRYYQGMNPVGSDRFDYARERISDTAGAVKEYARGYGGYFQSKVKDAAPGA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G18570			Oleosin family protein (.1)		Lus10041987 [exp]	0	1
AT2G39445			Phosphatidylinositol N-acetylg...		Lus10010489 [exp]	7.6	0.8928
AT3G29170			Eukaryotic protein of unknown ...		Lus10028939 [exp]	9.5	0.8786
AT1G11320			unknown protein		Lus10017280 [exp]	12.5	0.9017
AT3G12160		AtRABA4d	ARABIDOPSIS THALIANA RAB GTPAS...		Lus10021023 [exp]	24.4	0.8912
AT5G49760			Leucine-rich repeat protein ki...		Lus10012159 [exp]	26.4	0.8635
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10026736 [exp]	33.5	0.8766
AT3G19080			SWIB complex BAF60b domain-con...		Lus10009333 [exp]	35.3	0.8853
AT1G11320			unknown protein		Lus10013574 [exp]	37.5	0.8831
AT3G63010		ATGID1B, GID1B	GA INSENSITIVE DWARF1B, alpha/...		Lus10008189 [exp]	42.4	0.8846
AT3G52190		AtPHF1, PHF1	phosphate transporter traffic ...		Lus10038651 [exp]	57.1	0.8709

Compare expression of checked genes

Lus10041987 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.