Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G41790 1301 / 0 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 1172 / 0 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT1G06900 468 / 2e-149 Insulinase (Peptidase family M16) family protein (.1) AT3G57460 167 / 2e-45 catalytics;metal ion binding (.1) AT3G02090 45 / 0.0002 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018071 [exp] 1810 / 0 AT2G41790 1377 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018072 [exp] 1521 / 0 AT2G41790 1451 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042213 [exp] 422 / 1e-131 AT1G06900 1311 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10008604 [exp] 414 / 2e-128 AT1G06900 1271 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10040885 [exp] 47 / 5e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 47 / 6e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004939 [exp] 47 / 8e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G050700 [exp] 1380 / 0 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.013G154600 [exp] 435 / 3e-136 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.004G118900 [exp] 49 / 1e-05 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 48 / 4e-05 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10042064 pacid=23153501 polypeptide=Lus10042064 locus=Lus10042064.g ID=Lus10042064.BGIv1.0 annot-version=v1.0 ATGAGCGTTGGCGTTGGTTCTTTCAGCGACCCCGTTGGACTCGAAGGCCTTGCTCATTTCCTCGAACACATGCTGTTTTATGCTAGTGAGAAGTACCCGT TGGAGGATAGTTACTCCAAGTACATCAGTGAGCATGGAGGGGGAACCAATGCTTTCACTGCTTGTGACCAAACCAACTATCATTTTGATGTCAACAGCGA TTGTTTTGAAGATGCATTGGACAGATTTGCTCAATTCTTTATTAGACCACTCATGTCAGCTGATGCTACGACGAGGGAAATAAAAGCTGTTGATTCTGCT ACTCATTCCTGTTGTTCCTTTCTCTCGTATACAGAGAATCAAAACAATTTGTTATCTGATGCTTGGAGAATGAGTCAGCTTCAAAGGCATTTTAGCAAGG AAGGGCACCCATACCACAAGTTCAATACAGGTAACTGGGATACTCTGGAGGTAAGACCAAAAGCAAAGGGCTTGGATACAAGACAAGAACTGATAAAATT CTATGAAGAGCATTATTCAGCCAACCTCATGCATCTTGTAATTTATGCAAAAGAAAGCCTGGAAAAACTCCAAGGCATAGTTGAGGAGAAATTCCAGGAT ATTCAAAACCATGAGAGGAGCTGCTTCTCGTTCCCTGAGCAACCTTGCTCGCTAGAGCATTTACAGATACTCGTCAGAACAGTCCCTATAAAACAAGGCC ACGAGCTGAAAATTTCATGGCCGATAACCCCAGAGATTTTTTACTACAAGGGTGGACCTGTGAGGTATCTTAGCCATCTTATTGGTCATGAAGCAGAAGG ATCTGTATTTTATGTATTGAAAACCTTGGGATGGGCTACAGACTTATATGCTAGTGAAGACAGCTGGACAAACGACTTTTCTTTCTTTGAAGTGGCAATA GACCTCACTGATGCTGGTCATGAGCACATGCAAGATGTTGTTGGGCTACTATTCAAGTACATAAGGCTCTTGCAGCAGTCTGGAGTATGCAAATGGATAT TTGATGAGCTTGCAGCAGTTTGTCAGACGCAATTCCATTATCAAGACAAAATCCCCCCCATTGATTATGTTGTCAGTATTGCTTCCACTATACAAAAATA TCCCCCAGAAGAGTGGCTTGTAGGGTCAGCTTTGCTTTCTGATTTCAGTCCAAGCACAATCCAAATGTATCTCAATCAACTTTCTCAGGAAAACGTCCGT ATCTTCTGGGTCTCGAAGAAATTTGAAGGTGAAACGAACATGGTTGAACCATGGTATGGAACTGCATATGACATCGAGAAAATCAGTAGCTCCATGATTG AGGAATGGATGCAATCAGCTCCGGAAAAGGCTTTGCATCTTCCAATACGTAATGTGTTTGTTCCCACCGACTTATCAATCAAGGCTGCAAAAGAGAAGGT TGTATCGCCAACTCTATTGAGGAGATCATCCAATTTGTCCTTGTGGTACAAGCCGGATACAACATTCCTTACTCCAAAGTCATACATAAAGATCGATTTC AGTTGCCCTCTTGCTAGTGTTTCACCTGCAGCGTCAGTGCTTACAGATATTTTTGCTCGATTGTTAGTGGATTACTTGAATGAGTATGCCTATTATGCGC AAGTTGCTGGTTTATACTATGGAATTTATAGCACAACCCGTGGTTTTCAGGTGACTGTGGTTGGTTATAATGACAAATTGAGGATTTTGTTGGGAACTAT TATAAAGAAGATAGCTACATTCGTTGTCCGCCCTGACAGGTTTGTTGTGATCAAGGAAACCGTCATGAAGGAATATGAAAATTGCAAAGTCCATCAACCT TATGAACAGGCCAACTATTACTGCTATTATATACTGCAAGATCAAACATGGCCTTGGATGGAAGAATTTGAGGTTCTTCCTCAACTTCAGGCTGATGATC TTGCTAGGTTTGTACCAATGATGCTGTCAAGAGCCTTCTTGGAATGTTATGTAGCAGGGAACGTTGAACAAGATGAAGCGGAATCAATAAGTAATAAAAT CGAACATGCCTTTTTCAAGGGTCTGAGCCCCCTGTGCAAACCTTTGTTCTCCTCTCAACATCTGCCAAAAAGAGTTGTCCAGCTTGACATGGGCATCAGC TACATCTATCCAGTTGAAGGCTTAAATACAAAGGATGAGAATTCTGCTTTGCTGCATTATATTCAGGTTCACCGGGATGATTTCAAGCTGAACGTTAAGC TCGAGCTTTTTGCTTTAATTGCAAAGCAAGCAGCTTTCCACCAGCTTAGATCAGTCGAGCAACTTGGTTACATCACTTCCCTCGTTGAGACGAATAACTC TGGTGTTCATGGACTGCAGTTTACTATCCAATCGGCAGTGAAAGGTCCTGGGCAGATTGATTTGAGAGTCCAGGCTTTTCTTTTAATGTTCGAAGCCAAA CTGCGTGAGATGTCAGACGATGAATTCAAGAAACATGTGACTGCGTTGATCGACGCGAAACTCGAGAAGCTGCATAATTTGAGTGAAGAATCTTGGTATT ACTGGAGCGAGATTTCATGCGGGACACTCAGGTTTGACAGGAAGGAACGCGAGGTTGCAGCGTTGAGAGAGTTGAGTAAAGATGAGTTGATAGATTTCTT CAACGAGTATATAGGAGTAGATGCATCTCAGAAGAGGTCTCTGAGCATACGAGTTTACGGGAGCCCGCATTTGGCTGAAATGGCAGCCGATAAGAGCGAA GAATCGTGCCGTCCTAACCATGTTGAGATCGAGGACATCTGCAGTTTCAGAAGATCACAACCTCTTTACGGTTCTTTCAGAGGCGGCCATGTCTTTGGCC AAACGAAGCTGTGA
AA sequence Show only first row Show all	>Lus10042064 pacid=23153501 polypeptide=Lus10042064 locus=Lus10042064.g ID=Lus10042064.BGIv1.0 annot-version=v1.0 MSVGVGSFSDPVGLEGLAHFLEHMLFYASEKYPLEDSYSKYISEHGGGTNAFTACDQTNYHFDVNSDCFEDALDRFAQFFIRPLMSADATTREIKAVDSA THSCCSFLSYTENQNNLLSDAWRMSQLQRHFSKEGHPYHKFNTGNWDTLEVRPKAKGLDTRQELIKFYEEHYSANLMHLVIYAKESLEKLQGIVEEKFQD IQNHERSCFSFPEQPCSLEHLQILVRTVPIKQGHELKISWPITPEIFYYKGGPVRYLSHLIGHEAEGSVFYVLKTLGWATDLYASEDSWTNDFSFFEVAI DLTDAGHEHMQDVVGLLFKYIRLLQQSGVCKWIFDELAAVCQTQFHYQDKIPPIDYVVSIASTIQKYPPEEWLVGSALLSDFSPSTIQMYLNQLSQENVR IFWVSKKFEGETNMVEPWYGTAYDIEKISSSMIEEWMQSAPEKALHLPIRNVFVPTDLSIKAAKEKVVSPTLLRRSSNLSLWYKPDTTFLTPKSYIKIDF SCPLASVSPAASVLTDIFARLLVDYLNEYAYYAQVAGLYYGIYSTTRGFQVTVVGYNDKLRILLGTIIKKIATFVVRPDRFVVIKETVMKEYENCKVHQP YEQANYYCYYILQDQTWPWMEEFEVLPQLQADDLARFVPMMLSRAFLECYVAGNVEQDEAESISNKIEHAFFKGLSPLCKPLFSSQHLPKRVVQLDMGIS YIYPVEGLNTKDENSALLHYIQVHRDDFKLNVKLELFALIAKQAAFHQLRSVEQLGYITSLVETNNSGVHGLQFTIQSAVKGPGQIDLRVQAFLLMFEAK LREMSDDEFKKHVTALIDAKLEKLHNLSEESWYYWSEISCGTLRFDRKEREVAALRELSKDELIDFFNEYIGVDASQKRSLSIRVYGSPHLAEMAADKSE ESCRPNHVEIEDICSFRRSQPLYGSFRGGHVFGQTKL

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G41790			Insulinase (Peptidase family M...		Lus10042064 [exp]	0	1
AT2G41790			Insulinase (Peptidase family M...		Lus10018071 [exp]	1.0	0.9413
AT4G33620			Cysteine proteinases superfami...		Lus10020445 [exp]	2.4	0.8873
AT1G78280			transferases, transferring gly...		Lus10036482 [exp]	5.3	0.8195
AT5G55530			Calcium-dependent lipid-bindin...		Lus10043169 [exp]	6.0	0.8210
AT1G60890			Phosphatidylinositol-4-phospha...		Lus10015456 [exp]	8.5	0.8478
AT4G02020		SDG10, SWINGER,...	SWINGER, SET DOMAIN-CONTAINING...		Lus10041386 [exp]	8.7	0.8497
AT3G23700			Nucleic acid-binding proteins ...		Lus10021484 [exp]	9.2	0.8328
AT3G05030		ATNHX2, NHX2	sodium hydrogen exchanger 2 (....		Lus10005934 [exp]	9.5	0.8164
AT4G37080			Protein of unknown function, D...		Lus10032768 [exp]	11.2	0.8167
AT1G01040		SIN1, EMB76, EM...	SHORT INTEGUMENTS 1, EMBRYO DE...		Lus10005142 [exp]	11.6	0.8068

Compare expression of checked genes

Lus10042064 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.