Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17100 142 / 3e-42 SOUL heme-binding family protein (.1) AT1G78450 102 / 1e-26 SOUL heme-binding family protein (.1) AT1G78460 100 / 4e-26 SOUL heme-binding family protein (.1) AT5G20140 55 / 7e-09 SOUL heme-binding family protein (.1.2) AT2G37970 49 / 5e-07 SOUL-1 SOUL heme-binding family protein (.1) AT3G10130 42 / 0.0002 SOUL heme-binding family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001247 [exp] 402 / 1e-144 AT1G17100 142 / 3e-42 SOUL heme-binding family protein (.1) Lus10013045 [exp] 161 / 2e-49 AT1G17100 124 / 5e-35 SOUL heme-binding family protein (.1) Lus10012559 [exp] 138 / 2e-39 AT1G17100 292 / 1e-99 SOUL heme-binding family protein (.1) Lus10041532 [exp] 135 / 3e-39 AT1G17100 293 / 3e-101 SOUL heme-binding family protein (.1) Lus10029117 [exp] 126 / 6e-36 AT1G17100 99 / 3e-25 SOUL heme-binding family protein (.1) Lus10017193 [exp] 62 / 1e-11 AT2G37970 273 / 4e-94 SOUL heme-binding family protein (.1) Lus10022712 [exp] 49 / 7e-07 AT3G10130 366 / 1e-127 SOUL heme-binding family protein (.1) Lus10014203 [exp] 46 / 7e-06 AT3G10130 290 / 4e-98 SOUL heme-binding family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G088400 [exp] 288 / 1e-99 AT1G17100 155 / 3e-47 SOUL heme-binding family protein (.1) Potri.015G080000 [exp] 278 / 8e-96 AT1G17100 153 / 2e-46 SOUL heme-binding family protein (.1) Potri.010G044200 [exp] 172 / 7e-54 AT1G17100 119 / 4e-33 SOUL heme-binding family protein (.1) Potri.001G379000 [exp] 140 / 3e-41 AT1G17100 275 / 3e-94 SOUL heme-binding family protein (.1) Potri.001G067100 [exp] 100 / 9e-26 AT1G17100 142 / 6e-42 SOUL heme-binding family protein (.1) Potri.016G109400 [exp] 59 / 1e-10 AT2G37970 260 / 1e-88 SOUL heme-binding family protein (.1) Potri.018G073501 [exp] 54 / 1e-08 AT5G20140 528 / 0.0 SOUL heme-binding family protein (.1.2) Potri.016G098500 [exp] 45 / 1e-05 AT3G10130 295 / 7e-100 SOUL heme-binding family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0319 [flax] [poplar] SHS2 PF04832 [flax] [poplar] SOUL SOUL heme-binding protein
Representative CDS sequence Show only first row Show all	>Lus10042093 pacid=23153457 polypeptide=Lus10042093 locus=Lus10042093.g ID=Lus10042093.BGIv1.0 annot-version=v1.0 ATGGAGAAACCGAGGATGGCGATCGTGGCCTTGAGTCTACTCGCCTTGTTGGGTTTATCGGCGGCAATCGAGTCACCCCAGTACTCGGTCGTCCACGAAG AATCCGATTTTGAGATCAGATTGTACAGAGAATCCATATGGATGACTGCCCATGTCGATGAACTTTCCTTCCAGAAAGCCACTTTGCTCGGCTTTCACAG GCTGTTCCAGTTCATCCAAGGAGCCAATCTGAACTTTTCCAGGGTTCCAATGACATCTCCAGTAGTGACCAGCATAGTTCCGGGGTCCGGTCCATTCCAC TCATCGTCCTATTCGGTTCGATTCTACTTGCCCCTCAAGTTCCAGGACGACCCACCGACCCCTCTCCCGCAGCTGGAGCTGAAACCATTTGAATGGGATG CCCACTGTGTCGCTGTCAGGAAGTTCTCTGGGTATGCAAAGGATGAAAACGTCGTGAAAGAAGCTGAGAGGCTCGCTTCAAGCTTGAGCAGGTCGCAATG GGCTCTTCCAGCAGACGAAATTACCGGGTATGCCTATTCGATCGCGCAGTATGACTCCCCTTTTCATTTCATCGGGCGTGTTAATGAAGTGTGGGCTGAT GTTAAAGGCTCTGTTGAGGACGGCTGTGGTTGTTCCAGTGGGCTAGCAGCAACTTACTAA
AA sequence Show only first row Show all	>Lus10042093 pacid=23153457 polypeptide=Lus10042093 locus=Lus10042093.g ID=Lus10042093.BGIv1.0 annot-version=v1.0 MEKPRMAIVALSLLALLGLSAAIESPQYSVVHEESDFEIRLYRESIWMTAHVDELSFQKATLLGFHRLFQFIQGANLNFSRVPMTSPVVTSIVPGSGPFH SSSYSVRFYLPLKFQDDPPTPLPQLELKPFEWDAHCVAVRKFSGYAKDENVVKEAERLASSLSRSQWALPADEITGYAYSIAQYDSPFHFIGRVNEVWAD VKGSVEDGCGCSSGLAATY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17100			SOUL heme-binding family prote...		Lus10042093 [exp]	0	1
AT3G06170			Serinc-domain containing serin...		Lus10004430 [exp]	1.0	0.8942
AT5G28040	GeBP		DNA-binding storekeeper protei...		Lus10004121 [exp]	1.4	0.8876
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10038866 [exp]	3.9	0.8695
AT1G71180			6-phosphogluconate dehydrogena...		Lus10001349 [exp]	4.2	0.8672
AT3G57340			Heat shock protein DnaJ, N-ter...		Lus10030079 [exp]	4.6	0.8796
AT1G12060		ATBAG5	BCL-2-associated athanogene 5 ...		Lus10010486 [exp]	4.9	0.8597
AT4G19950			unknown protein		Lus10038358 [exp]	4.9	0.8791
AT5G64920		CIP8	COP1-interacting protein 8 (.1...		Lus10031422 [exp]	5.3	0.8324
AT3G02910			AIG2-like (avirulence induced ...		Lus10040635 [exp]	6.3	0.8551
AT2G43250			unknown protein		Lus10040469 [exp]	6.6	0.8404

Compare expression of checked genes

Lus10042093 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.