Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G06900 1274 / 0 Insulinase (Peptidase family M16) family protein (.1) AT2G41790 465 / 2e-147 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 405 / 5e-126 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT5G01440 141 / 5e-37 unknown protein AT5G56730 62 / 2e-09 Insulinase (Peptidase family M16) protein (.1) AT3G57460 52 / 2e-06 catalytics;metal ion binding (.1) AT5G42390 51 / 6e-06 SPP stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) AT3G02090 49 / 2e-05 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008604 [exp] 1819 / 0 AT1G06900 1271 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018071 [exp] 443 / 1e-138 AT2G41790 1377 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018072 [exp] 437 / 4e-136 AT2G41790 1451 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042064 [exp] 432 / 4e-135 AT2G41790 1320 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10012918 [exp] 66 / 1e-10 AT5G56730 1501 / 0.0 Insulinase (Peptidase family M16) protein (.1) Lus10004939 [exp] 50 / 8e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 50 / 1e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 50 / 1e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10021970 [exp] 47 / 8e-05 AT5G42390 1122 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G154600 [exp] 1385 / 0 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.006G050700 [exp] 444 / 2e-139 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.004G118900 [exp] 52 / 1e-06 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.002G235700 [exp] 50 / 1e-05 AT5G42390 1822 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Potri.014G149200 [exp] 49 / 2e-05 AT5G42390 1815 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Potri.017G092400 [exp] 48 / 3e-05 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10042213 pacid=23153957 polypeptide=Lus10042213 locus=Lus10042213.g ID=Lus10042213.BGIv1.0 annot-version=v1.0 ATGCTATGCGGCTCGCCATGGAGTTTGGCCACCGCGAATAGGTTTGTCAAGGGAAGTCGAGCAGCAGTGAGTTTCAGGTGCAGCTTCACAGTCATCACCA CGTCGACGACGACGACGACGAAGAAGAAGAAGCAACGAGTCTGCAATTCCATCTCCTCACCTTACACTTATCTCGACGCTGTTGCGAAGATTCGGAGACG GAAAGCAGAGATGGTTGCTCGTTGCGCATTCAAATCTGACGACTTGGTGATAAAGTCGCCTAACGACAAGCGATTGTACAGAGTGATTGAGCTGGACAAT GGACTGTGTGGCTTACTCATTCACGATCCTGAGATTTATCCCGACGGGAAAGCTCCTCCTCCGCCTGGAGAGGACGGAGAGGCTGCAACCCTAAAGGATG GTAGAGGACTGAAGGATATGTCGGAGGATGACGAGGATGATGAAGAGCTTGATGACGAGGACGATGATATGGAAGAAGAGGACGACGATGATGAAGACGA GGAGGAGGATGACGAAGATGGAGAAGGGGAGGAAGGGAATGGAAACAGTTCCCAGACTAGGAAGGCAGCTGCAGCTATGTGTGTTGGTGTGGGCAGCTTC CTCGACCCTAGAAATGCACAGGGACTGGCACATTTTCTAGAACACATGCTCTTTATGGGGAGTTCTGAATTTCCAGATGAAAATGAGCATGGGGGCTGTT CAAATGCATACACTGAAGTTGAGAGTACCTGCTACCATTTTGATGTCAAGCCTGAATTTCTTAAGGGTGCATTGGAAAGGTTTTCTCAGTTTTTCATTTC TCCACTCGTGAAAAGTGAAGCCATGGAACGAGAGGTTCTTGCAGTGGACTCAGAGTTTAACCAGGTGCTACAGAATGATGGTTGCCGACTTCAACAGATT CAATGTCATACATCTGAACCCGGTCACCCTTTTAACGGATTCTTTTGGGGAAATAAGAAGAGTCTTGCAGATGCCGTAGATAAAGGGGTAGATTTGCGAG AGCAAATTCTCAAATTGTATAATGATTACTATCACGGTGGAGTAATGAAGCTCGTCGTCATCGGGGGAGAGTCTTTGGACGTTCTGGAGGACTGGGTTAC AGAATTGTTTGCTAATGTCAGGAAAGGGCCTCGAGCACAGCCAACCTTCCAGGTAGAAGGCCCCATCTGGAAAGCTGGTAAAATTTATAGGGTAGAGGCA GTTAAAGATGTTCACCTCCTTGATTTAACTTGGACGCTACCATGTCTCCGCCAAGATTATCTGAAGAAGTCAGAAGACTATCTAGCCCATCTAATTGGGC ATGAGGGCAAGGGGAGTTTACTTTCTCTTTTCAAAGCTAGAGGATGGGCAACTTCATTGTCTGGCGGTGTTGGGGATGATGGAATGCATCGATCCTCCAT AGCTTATGTTTTTGGCATGTCAATACATCTGACTGACTCCGGCTTGGAAAAGATTTGTAGAAAATCGATGGAATTCAGATTTGTAGAGAATCAGGCTCAA GATGATTATGCAGTCGATCTAGCAGAAAACTTACTCAAATATCCAGCTGAGCATGTTATCTACGGAGACTACGTCTATAAGACATGGGATGGTGAAAAGA TGAAAAATATTCTTAGCTTTTTCAAACCAGAGAACATGAGGATTGATGTGCTTTCAAAGTCATTCACCAATCTAGAAAGTTTCAGACTTGAACCATGGTT CGGATCTCGGTATACTGAGGAACAGATTCCGCTTCCTGTCATGCAACTTTGGAGTAACCCACCCGAAATTGATAGCTCTCTGCATCTACCTTTGAAGAAC GACTTCATTCCTACTGATTTCTCCATCCGTGCTGATAAGTCAGAACAATTGGTTCCAAAATGTATAATTGACGAACCAATAATGAAGTTCTGGTACAAGC TTGATAGCACTTTTAAGCATCCTCGTGTCAATGCGTATTTCCGCATAAATCTCAAGGGAGGCTATGATAACGTGAAGAATAGTCTTATGACTGAACTTTT CATCAACCTCCTAAAGGATGAGCTAAATGAGATGATATATCAGGCTAGCGTTGCAAAGTTGGATACATCTGTATCTTTCATCGGTGATCAATTGGAGCTG AAGGTTTACGGTTTCAACGACAAGGTTGCAGTCTTGCTGTCCAAAGTTTTGATGGTAGCCAAATCTTTCATCCCAACAGCTGACCGTTTTAAGGTCATCA AAGAGGACGTTGAGAGAAGGCTTAAAAATGCAAACATGAAGCCTCTCAATCATTCTTCCTATCTGAGACTCCAAGTTCTTTGTAAGAATTTCTATGATGT GCAAGAGAAGCAAGATGTATTGCATCACATAAATTTAGATGATTTGAGAGCATTTATTCCGGAGCTGCGTTCCCAGCTCTACATTGAGGGTCTTTGTCAT GGCAATTTGTTAGAAGAAGAAGCTCTCAGCATTGCAAATATTTTTAAAAGCAACTTCCCTGTGCAACCACTTCCGTTGAATATGAGACATAAAGAGTTTA TAATTCGTCTCCCTGCTGGTGCTAACCTCCTCAGGGACGTGAATGTGAAGAATAAATCTGAAACGAATTCGGTAGTTGAGCTTTATTTCCAAATTGAGCC TGAACAAGGCTCAGGAGCATTTAAGTTGAAGGCCTTGATAGATCTTTTCGACGAAATTGTGCAAGAACCATTCTTCAATCAGCTAAGGACGAAGGAGCAA CTTGGTTATGTTGTTCAGTGCAGTCCCCGAACAACGTACCGCATTCATGGATTTTGCTATGTCGTTCAATCTGCCAAGTACAACCCAGTTTACCTTCAAG GGAGAGTGGAAAGCTTTATAAATGGCCTCGAAGATTTGCTGCAAGGGCTGGATGAATCATCTTTCGAGAACTACAAAAACGGGTTAATGAGTAAACTGCT CGAGAAGGATCCTTCTGTCCAGGACGAAACTAATCGCCTATGGAATCAGATTGTCGATAAAAGGTACGTGTTCGACTTCTCGCTGAAGGAAGCGGAAGAA CTGAAGAACATTACCAAGAGCGAAGTCATCGACTGGTGCAGAGAATATCTGCTTCAGTCGTCTCCTAAATGCAGGAGACTTGCAGTTCGAGTCTGGGGTT GTGAAGCTGACTTGAAGGAGCTCGAAAAACGTCCAGACTCGGAACAGGTTATCAAGGACCTCTCGGCCTTCAAGATTTCGACCGATTGCTACCCTAGCCT TTGCTGA
AA sequence Show only first row Show all	>Lus10042213 pacid=23153957 polypeptide=Lus10042213 locus=Lus10042213.g ID=Lus10042213.BGIv1.0 annot-version=v1.0 MLCGSPWSLATANRFVKGSRAAVSFRCSFTVITTSTTTTTKKKKQRVCNSISSPYTYLDAVAKIRRRKAEMVARCAFKSDDLVIKSPNDKRLYRVIELDN GLCGLLIHDPEIYPDGKAPPPPGEDGEAATLKDGRGLKDMSEDDEDDEELDDEDDDMEEEDDDDEDEEEDDEDGEGEEGNGNSSQTRKAAAAMCVGVGSF LDPRNAQGLAHFLEHMLFMGSSEFPDENEHGGCSNAYTEVESTCYHFDVKPEFLKGALERFSQFFISPLVKSEAMEREVLAVDSEFNQVLQNDGCRLQQI QCHTSEPGHPFNGFFWGNKKSLADAVDKGVDLREQILKLYNDYYHGGVMKLVVIGGESLDVLEDWVTELFANVRKGPRAQPTFQVEGPIWKAGKIYRVEA VKDVHLLDLTWTLPCLRQDYLKKSEDYLAHLIGHEGKGSLLSLFKARGWATSLSGGVGDDGMHRSSIAYVFGMSIHLTDSGLEKICRKSMEFRFVENQAQ DDYAVDLAENLLKYPAEHVIYGDYVYKTWDGEKMKNILSFFKPENMRIDVLSKSFTNLESFRLEPWFGSRYTEEQIPLPVMQLWSNPPEIDSSLHLPLKN DFIPTDFSIRADKSEQLVPKCIIDEPIMKFWYKLDSTFKHPRVNAYFRINLKGGYDNVKNSLMTELFINLLKDELNEMIYQASVAKLDTSVSFIGDQLEL KVYGFNDKVAVLLSKVLMVAKSFIPTADRFKVIKEDVERRLKNANMKPLNHSSYLRLQVLCKNFYDVQEKQDVLHHINLDDLRAFIPELRSQLYIEGLCH GNLLEEEALSIANIFKSNFPVQPLPLNMRHKEFIIRLPAGANLLRDVNVKNKSETNSVVELYFQIEPEQGSGAFKLKALIDLFDEIVQEPFFNQLRTKEQ LGYVVQCSPRTTYRIHGFCYVVQSAKYNPVYLQGRVESFINGLEDLLQGLDESSFENYKNGLMSKLLEKDPSVQDETNRLWNQIVDKRYVFDFSLKEAEE LKNITKSEVIDWCREYLLQSSPKCRRLAVRVWGCEADLKELEKRPDSEQVIKDLSAFKISTDCYPSLC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G06900			Insulinase (Peptidase family M...		Lus10042213 [exp]	0	1
AT3G03380		DEG7, DEGP7	degradation of periplasmic pro...		Lus10028521 [exp]	1.4	0.8698
AT5G11240			transducin family protein / WD...		Lus10033468 [exp]	4.5	0.9022
AT5G17930			MIF4G domain-containing protei...		Lus10019865 [exp]	6.9	0.8660
AT2G38280		ATAMPD, FAC1	EMBRYONIC FACTOR1, ADENOSINE 5...		Lus10037223 [exp]	7.5	0.8590
AT5G60870		RUG3	RCC1/UVR8/GEF-like 3, Regulato...		Lus10042215 [exp]	8.4	0.7775
AT3G23790		AAE16	acyl activating enzyme 16, AMP...		Lus10023224 [exp]	9.5	0.8304
AT5G03280		CKR1, PIR2, ORE...	ORESARA 3, ORESARA 2, ENHANCED...		Lus10013803 [exp]	11.5	0.8428
AT1G63770			Peptidase M1 family protein (....		Lus10024641 [exp]	14.1	0.8096
AT2G19430		DWA1, AtTHO6	DWD (DDB1-binding WD40 protein...		Lus10011938 [exp]	14.1	0.8432
AT3G46100		ATHRS1	Histidyl-tRNA synthetase 1 (.1...		Lus10014422 [exp]	14.4	0.7334

Compare expression of checked genes

Lus10042213 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.