Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G30140 122 / 3e-33 UDP-Glycosyltransferase superfamily protein (.1.2) AT2G30150 117 / 1e-31 UDP-Glycosyltransferase superfamily protein (.1) AT1G78270 88 / 8e-21 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT1G22340 82 / 1e-18 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT2G28080 82 / 2e-18 UDP-Glycosyltransferase superfamily protein (.1) AT1G22380 79 / 1e-17 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22360 79 / 1e-17 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT2G36970 78 / 2e-17 UDP-Glycosyltransferase superfamily protein (.1) AT1G22370 77 / 4e-17 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22400 77 / 1e-16 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042262 [exp] 182 / 2e-56 AT2G30150 375 / 2e-127 UDP-Glycosyltransferase superfamily protein (.1) Lus10042261 [exp] 166 / 1e-49 AT2G30140 472 / 1e-164 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10026393 [exp] 112 / 6e-31 AT2G30140 238 / 4e-76 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10042260 [exp] 111 / 5e-29 AT2G30140 410 / 3e-139 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10026394 [exp] 106 / 3e-27 AT2G30140 425 / 3e-146 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10021437 [exp] 87 / 2e-20 AT2G36970 530 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10021438 [exp] 85 / 1e-19 AT2G36970 534 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016126 [exp] 83 / 6e-19 AT2G28080 551 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016128 [exp] 83 / 6e-19 AT2G36970 558 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G281900 [exp] 135 / 3e-38 AT2G30140 478 / 6e-167 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.009G077200 [exp] 125 / 2e-34 AT2G30140 478 / 6e-167 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.001G281800 [exp] 122 / 4e-33 AT2G30150 467 / 5e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G282100 [exp] 122 / 4e-33 AT2G30140 475 / 5e-166 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.009G077500 [exp] 120 / 1e-32 AT2G30140 450 / 5e-156 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.009G077400 [exp] 106 / 2e-27 AT2G30150 464 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G132400 [exp] 82 / 1e-18 AT1G22340 527 / 0.0 UDP-glucosyl transferase 85A7 (.1) Potri.009G008100 [exp] 82 / 2e-18 AT2G28080 622 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.016G018001 [exp] 81 / 2e-18 AT1G22370 418 / 4e-143 UDP-glucosyl transferase 85A5 (.1.2) Potri.006G022300 [exp] 81 / 3e-18 AT1G22360 518 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10042264 pacid=23153648 polypeptide=Lus10042264 locus=Lus10042264.g ID=Lus10042264.BGIv1.0 annot-version=v1.0 ATGGTTGCCGCCGCTGCAGGCGGCGGAGACGGCGTGAAGGGAATGGTGGTTCCGTGGTGTGACCAATTGAGGGTGCTCTGCCACGGTTCAGTGGGTGGGT TCTGGACGCACTGCGGGATGAATTCGACGATGGAAGGTGTGTACGCGGTAGTTCCGATGTTGTGTTGGCCTTTGTTTATCGATCAATTTACAAACTGTAA AGCAATTGTGGATGATTGGGGAATTGGGTGGAGAGCGAGGAGGAGGAACAATCAGGAGTTGGTTAGGCGGGAGGAAGTTGCGGAGATGGTGAGGAGGTTC ATGGATGCAAAGGAGGAGAACGTTGAAGTAATGGAAATGAGGAAGAGGGCGTCGGGGCTCCGAGAGGTTTGCCAAGCGGCGGGGGGGGGGGGGGGGGGGG CGGATTTGAGCTTGGATTCGTTTGTGGAGGACATTTCTACGTTGTCTAGTCCCGAGCAAATTGGGCGGAGAGCATTGTATTTTGTTCTATTGTTTTAG
AA sequence Show only first row Show all	>Lus10042264 pacid=23153648 polypeptide=Lus10042264 locus=Lus10042264.g ID=Lus10042264.BGIv1.0 annot-version=v1.0 MVAAAAGGGDGVKGMVVPWCDQLRVLCHGSVGGFWTHCGMNSTMEGVYAVVPMLCWPLFIDQFTNCKAIVDDWGIGWRARRRNNQELVRREEVAEMVRRF MDAKEENVEVMEMRKRASGLREVCQAAGGGGGGADLSLDSFVEDISTLSSPEQIGRRALYFVLLF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G30140			UDP-Glycosyltransferase superf...		Lus10042264 [exp]	0	1
AT1G54540			Late embryogenesis abundant (L...		Lus10031888 [exp]	16.8	0.8605
AT1G06520		ATGPAT1, GPAT1	glycerol-3-phosphate acyltrans...		Lus10020767 [exp]	18.7	0.8500
AT5G05340			Peroxidase superfamily protein...		Lus10034207 [exp]	20.1	0.8615
AT1G47420		SDH5	succinate dehydrogenase 5 (.1)		Lus10009768 [exp]	23.7	0.7967
AT1G01490			Heavy metal transport/detoxifi...		Lus10028762 [exp]	26.0	0.8561
AT2G37360		ABCG2	ATP-binding cassette G2, ABC-2...		Lus10030307 [exp]	29.7	0.8455
AT5G13580		ABCG6	ATP-binding cassette G6, ABC-2...		Lus10030306 [exp]	30.0	0.8517
AT1G65610		ATGH9A2 ,KOR2	KORRIGAN 2, ARABIDOPSIS THALIA...		Lus10026863 [exp]	32.0	0.8536
AT1G05450			Bifunctional inhibitor/lipid-t...		Lus10021911 [exp]	32.2	0.8501
AT5G25900		ATKO1, CYP701A3...	CYTOCHROME P450 701 A3, ARABID...		Lus10032747 [exp]	35.9	0.8270

Compare expression of checked genes

Lus10042264 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.