Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G30120 153 / 7e-44 unknown protein AT3G14750 130 / 7e-35 unknown protein AT1G67170 117 / 1e-29 unknown protein AT1G55170 82 / 1e-17 unknown protein AT5G61920 63 / 3e-11 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026389 [exp] 341 / 2e-117 AT2G30120 159 / 2e-47 unknown protein Lus10013698 [exp] 131 / 3e-35 AT3G14750 298 / 3e-100 unknown protein Lus10005563 [exp] 130 / 1e-34 AT3G14750 288 / 2e-96 unknown protein Lus10038143 [exp] 124 / 7e-33 AT3G14750 275 / 1e-91 unknown protein Lus10035371 [exp] 102 / 6e-25 AT1G67170 284 / 2e-95 unknown protein Lus10030976 [exp] 104 / 1e-24 AT1G67170 294 / 1e-96 unknown protein Lus10037647 [exp] 94 / 7e-22 AT1G55170 233 / 6e-76 unknown protein Lus10015629 [exp] 92 / 5e-21 AT1G55170 236 / 2e-77 unknown protein Lus10015628 [exp] 89 / 4e-20 AT1G55170 211 / 3e-68 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G281400 [exp] 187 / 2e-57 AT2G30120 161 / 4e-48 unknown protein Potri.009G076700 [exp] 182 / 1e-54 AT3G14750 173 / 8e-52 unknown protein Potri.001G382700 [exp] 135 / 4e-37 AT3G14750 297 / 6e-100 unknown protein Potri.017G109700 [exp] 119 / 1e-29 AT1G67170 282 / 3e-91 unknown protein Potri.003G037900 [exp] 100 / 2e-24 AT1G55170 259 / 2e-86 unknown protein Potri.006G178100 [exp] 92 / 4e-21 AT5G61920 155 / 3e-46 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10042267 pacid=23153539 polypeptide=Lus10042267 locus=Lus10042267.g ID=Lus10042267.BGIv1.0 annot-version=v1.0 ATGTCGGAACGAAATCGCCAACGACGTCCTCTCTCTCCACGCTCGAAGGATGACCACCGCCGTTCGCGGGACCGCCACTCCCTCTCTTCCGCTGCCGCCT CCGACCGTAGACACACTTCAATCATCCTCGAGGAAAGCATCGCCATTCAGCACCGTGAAATTCAGGCGCTGATCATCGAGAACGAGCACCTCGCTGCTGC TCACGTTGCGCTGAAGCAGGACCTTGCCCTCGCGCAGCAGGACGTCCGCCTCTTGGCGAAGGCAGCAGGCGAGGTTAAGGCCGAGCGGGACAACGAGGTG CGGGACGTCTTCGAGAGGTCACTGAAAATAGAAGCCGAGCTTCGCTCCAAGGATCAGATGACCGCCGAGCTGGCTCAGGTGAGGTCGGACTTGCCAAAGC TTGCGGCGGAGCGTATGGAGCTCGTGAAGGAGTTGGAAGCGGTAGGTGATGAGTTGATGAAGACTAAGAGAGATTCAGACCGTCTTCCCGAGATTAAAGC CGAGATTCAGAAGTTGCGGCAGGAGATTCAGAAAGGAAGGGCTGCTGTTGACTGTGAGAAGAAGACTCGTGTCAACAATCTTGAGCATGGTAAGACAATG GACAGGAATAAGGTTGTTTTAGCTGATGAGATAGAAAGACTCGAGATTGAGTTAGCCAAAGCACAGAAAAGAGCAAGGCTAGCGGCAGCAGCAGCTTCTG CAGCTGGGACAGCAACAATGAATCCAGATCCTGCTTACGCCAGTCATGGAGTAGAACTTGGAGGTCCTTATCCTAACCCATACGCGCAGAACGCTAGAAC TAACAAGAGATATAGTGAGAGTCCAAAACGGAGCTATTTCAGCAAGTGGTTGTTTACTTGTCGAGTTTTAAACATGCCGGGGCGTGGCATAGTAGCAATA ACTGTTTGGATCGCTGCCACTAATGCTATATTGTACGGCTTGTTCAGGTTCAAAGCATTCCTGAGACGACACCTCCACAACATGTGTCAAGATCAACATC CAACAGTCCTTATGAGTTGCAGCAGCAAGAGCAAGCACATAGATAGCGGTACAACATCTCTTTGA
AA sequence Show only first row Show all	>Lus10042267 pacid=23153539 polypeptide=Lus10042267 locus=Lus10042267.g ID=Lus10042267.BGIv1.0 annot-version=v1.0 MSERNRQRRPLSPRSKDDHRRSRDRHSLSSAAASDRRHTSIILEESIAIQHREIQALIIENEHLAAAHVALKQDLALAQQDVRLLAKAAGEVKAERDNEV RDVFERSLKIEAELRSKDQMTAELAQVRSDLPKLAAERMELVKELEAVGDELMKTKRDSDRLPEIKAEIQKLRQEIQKGRAAVDCEKKTRVNNLEHGKTM DRNKVVLADEIERLEIELAKAQKRARLAAAAASAAGTATMNPDPAYASHGVELGGPYPNPYAQNARTNKRYSESPKRSYFSKWLFTCRVLNMPGRGIVAI TVWIAATNAILYGLFRFKAFLRRHLHNMCQDQHPTVLMSCSSKSKHIDSGTTSL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G30120			unknown protein		Lus10042267 [exp]	0	1
AT1G60670			Protein of unknown function (D...		Lus10030566 [exp]	1.7	0.8508
AT3G13670			Protein kinase family protein ...		Lus10013737 [exp]	4.6	0.7672
AT3G62130		LCD	L-cysteine desulfhydrase, Pyri...		Lus10038033 [exp]	5.3	0.7648
AT1G60670			Protein of unknown function (D...		Lus10012911 [exp]	7.5	0.7947
AT2G45620			Nucleotidyltransferase family ...		Lus10009309 [exp]	10.0	0.7575
AT5G22840			Protein kinase superfamily pro...		Lus10020515 [exp]	13.0	0.7227
AT4G00720		ASKTHETA, ATSK3...	SHAGGY-LIKE PROTEIN KINASE THE...		Lus10041360 [exp]	14.1	0.6291
AT2G02148			unknown protein		Lus10031926 [exp]	15.9	0.6991
AT4G22360			SWIB complex BAF60b domain-con...		Lus10016581 [exp]	19.0	0.7514
AT3G26810		AFB2	auxin signaling F-box 2 (.1)		Lus10035160 [exp]	20.8	0.7091

Compare expression of checked genes

Lus10042267 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.