Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G24250 283 / 1e-91 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT4G02600 185 / 1e-53 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 150 / 5e-41 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT2G39200 145 / 8e-39 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT2G33670 140 / 2e-37 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 133 / 6e-35 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT1G26700 128 / 1e-32 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT5G53760 128 / 2e-32 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT2G17430 116 / 2e-28 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G17480 114 / 8e-28 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026276 [exp] 358 / 3e-120 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10001336 [exp] 229 / 4e-70 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10012241 [exp] 204 / 6e-62 AT3G45290 336 / 2e-110 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10016035 [exp] 207 / 4e-61 AT1G11310 317 / 7e-100 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Lus10027093 [exp] 165 / 2e-46 AT4G02600 580 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10008340 [exp] 163 / 1e-45 AT4G02600 576 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10036120 [exp] 155 / 3e-42 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10001370 [exp] 139 / 1e-36 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10012698 [exp] 136 / 1e-35 AT1G11000 305 / 2e-97 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G078800 [exp] 191 / 2e-56 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.013G069900 [exp] 184 / 3e-53 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.007G146900 [exp] 156 / 4e-43 AT4G02600 613 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 156 / 5e-43 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000800 [exp] 155 / 1e-42 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 140 / 6e-37 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.007G064200 [exp] 134 / 7e-35 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 129 / 7e-33 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.005G254300 [exp] 128 / 1e-32 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.001G402400 [exp] 125 / 9e-32 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10042397 pacid=23153719 polypeptide=Lus10042397 locus=Lus10042397.g ID=Lus10042397.BGIv1.0 annot-version=v1.0 ATGCCTTCTCATCTTGCTGCCACCATGCTCCCTTGCAAGAGAACCAAAACTGAAGGAGGCAGCGGCAGCAGCACTGAACACTATCAAATGTTCCTTCATT CATCTCTACCCCCAAGACGACATCTCCTATCTTCTTCTGCGGAAGCAGTCAGTTGTTCCAAGGGGAAGGTTCCACTGCTGTCATTGGAGGCATTGCACCA GCTGCATATCTTCATCTTTGTATTAGCAGTGGTGCATGTATTGTTCTGTGCCACCACCATGGTTCTTGGAGGAGCAAGGAGGAATGCCCGAACAGCTCAT GAACATCACCACCAACTGTTCATAGAAAAGCATGCTAAAGGGCGTTGCAGCAACTCATCTGCTTTTAGTTGGCTGGTATCATTCTTCAAACAATTCTACG GCTCCATAACCAAGTCTGACTACATTGCTCTTCGACAAGGATTTATCACGCTGCTGCTGATCGTGGGGGCGAAGCTAGAACATATAATAGCACAGTTGGC ACAGGAAGCATTAGAGAAGAACAGCCAACACAATCGGCGTGTGGAGGCAGCAGCAGCAGAAAGGGTGGAGCCTTCTGATAAACACTTTTGGTTCCACCGC CCTGCAATTGTTCTTCACTTGATTCACTTCATTCTCTTCCAGAATTCCTTCGAGATCGCTTTCTTCTTCTGGATTTGGAGCACGTACGGATTCGATTCGT GCATCATGGAAAAGCTGGGCTATATTATACCAAGGCTAATCATGGGTGTGATCGTCCAAGTCCTATGCAGTTACAGTACGCTGCCGCTCTATGCACTCGT CTCCCAGGTTTCACATCCATCTACAACCTTTTTCCTTGTGCAACAAATGGGAAGTAGGTTCAAGAAAGGGATGTTCGACGACTACGTACAGTCATCGTTG GACGATTGGTTGTCATCACTGCGAGCCAGGAGAGAAGGAGACTCCAGCTCCAACCCTCACCTTGATCGACTGGCCGCTGCATATCCACCCGGTGCTGCAG AGCAAGAAATGGTCCCCATCGCTGATTCCCGAAACACTTCCGCTAGAACTACAATCATCCCCCTTGCGTCTCCCCATTCGCCTTCTTCACCTTCCTCAGT TTGA
AA sequence Show only first row Show all	>Lus10042397 pacid=23153719 polypeptide=Lus10042397 locus=Lus10042397.g ID=Lus10042397.BGIv1.0 annot-version=v1.0 MPSHLAATMLPCKRTKTEGGSGSSTEHYQMFLHSSLPPRRHLLSSSAEAVSCSKGKVPLLSLEALHQLHIFIFVLAVVHVLFCATTMVLGGARRNARTAH EHHHQLFIEKHAKGRCSNSSAFSWLVSFFKQFYGSITKSDYIALRQGFITLLLIVGAKLEHIIAQLAQEALEKNSQHNRRVEAAAAERVEPSDKHFWFHR PAIVLHLIHFILFQNSFEIAFFFWIWSTYGFDSCIMEKLGYIIPRLIMGVIVQVLCSYSTLPLYALVSQVSHPSTTFFLVQQMGSRFKKGMFDDYVQSSL DDWLSSLRARREGDSSSNPHLDRLAAAYPPGAAEQEMVPIADSRNTSARTTIIPLASPHSPSSPSSV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G24250		ATMLO13, MLO13	MILDEW RESISTANCE LOCUS O 13, ...		Lus10042397 [exp]	0	1
AT3G05620			Plant invertase/pectin methyle...		Lus10029868 [exp]	1.0	0.9831
AT1G79430	GARP	WDY, APL	WOODY, ALTERED PHLOEM DEVELOPM...		Lus10001844 [exp]	2.0	0.9699
AT1G63310			unknown protein		Lus10008287 [exp]	3.9	0.9629
AT1G79430	GARP	WDY, APL	WOODY, ALTERED PHLOEM DEVELOPM...		Lus10001754 [exp]	4.9	0.9544
AT1G29380			Carbohydrate-binding X8 domain...		Lus10004600 [exp]	5.3	0.9599
AT1G05610		APS2	ADP-glucose pyrophosphorylase ...		Lus10042456 [exp]	6.0	0.9503
AT1G60360			RING/U-box superfamily protein...		Lus10025612 [exp]	6.3	0.9524
AT1G60360			RING/U-box superfamily protein...		Lus10022967 [exp]	6.5	0.9553
AT5G03795			Exostosin family protein (.1)		Lus10016058 [exp]	6.6	0.9437
AT4G24250		ATMLO13, MLO13	MILDEW RESISTANCE LOCUS O 13, ...		Lus10026276 [exp]	6.7	0.9227

Compare expression of checked genes

Lus10042397 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.