Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G15870 358 / 5e-120 glycosyl hydrolase family 81 protein (.1) AT1G18310 299 / 4e-98 glycosyl hydrolase family 81 protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021987 [exp] 473 / 3e-165 AT5G15870 949 / 0.0 glycosyl hydrolase family 81 protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G105300 [exp] 394 / 7e-134 AT5G15870 897 / 0.0 glycosyl hydrolase family 81 protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0103 [flax] [poplar] Gal_mutarotase PF03639 [flax] [poplar] Glyco_hydro_81 Glycosyl hydrolase family 81 N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10042525 pacid=23181770 polypeptide=Lus10042525 locus=Lus10042525.g ID=Lus10042525.BGIv1.0 annot-version=v1.0 ATGGCTGATTTTATGAACTTGGGGAAGCGATCCGATTCGAGATACACACGTCTGAGGTGCTTTGATTTGTACAAGCTGCATTCTTGGGCTGGAGGGCTGA CTGAATTCGCCGATGGACGAAATCAGGAGAGTACAAGTGAAGCTGTGAACGCGTACTATTCGGCAGCTTTGATGGGATTAGCTTATGGGGACACTCATCT CGTAGCAATCGGATCTGTACTTGCTGCAATGGAGATTCAAGCTAGTCAGACATGGTGGCATGTGAAGGAAGGTGATAAAATCTATGCACCAGATTTCACA TCCGAGAACAGAGTTGTGGGTGTGCTTTGGTCTACCAAAAGGGACAGCGGGCTATGGTTTGCTCCTCCGGAATGGAAAGAGTGTAGGCTTGGTATTCAGG TGCTGCCATTGTTGCCGATTACCGAAGTTTTGTTCTCCGATGTTCGGTTTACGAGACAGCTTGTGGATTGGACATTGCCGGCTTTAGCGAGGGAAGGAGT TGGAGAAGGATGGAAAGGGTTTGTGTATGCATTGGAAGCTGTCTATGATAAAGGGAGTGCTTTGGAGAAGACTAAGAGGTTGAACGGTCACGATGATGGA AATTCTTTGACTAATATGCTGTGGTGGATTCATAGTAGAGATGATGATGACGAGGAGAGAAGAATGTCAGGGTGTGAGGATGGTGGGAAGTTCTGCTGGT TTGGTCATTATTGTCACTGA
AA sequence Show only first row Show all	>Lus10042525 pacid=23181770 polypeptide=Lus10042525 locus=Lus10042525.g ID=Lus10042525.BGIv1.0 annot-version=v1.0 MADFMNLGKRSDSRYTRLRCFDLYKLHSWAGGLTEFADGRNQESTSEAVNAYYSAALMGLAYGDTHLVAIGSVLAAMEIQASQTWWHVKEGDKIYAPDFT SENRVVGVLWSTKRDSGLWFAPPEWKECRLGIQVLPLLPITEVLFSDVRFTRQLVDWTLPALAREGVGEGWKGFVYALEAVYDKGSALEKTKRLNGHDDG NSLTNMLWWIHSRDDDDEERRMSGCEDGGKFCWFGHYCH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G15870			glycosyl hydrolase family 81 p...		Lus10042525 [exp]	0	1
AT1G70420			Protein of unknown function (D...		Lus10002380 [exp]	2.4	0.9587
AT3G03550			RING/U-box superfamily protein...		Lus10009326 [exp]	4.5	0.9333
AT5G15870			glycosyl hydrolase family 81 p...		Lus10042526 [exp]	8.7	0.9334
AT2G03220		ATFUT1, ATFT1, ...	MURUS 2, ARABIDOPSIS THALIANA ...		Lus10013549 [exp]	12.0	0.9343
AT4G13010			Oxidoreductase, zinc-binding d...		Lus10003159 [exp]	13.0	0.8850
AT5G03810			GDSL-like Lipase/Acylhydrolase...		Lus10008635 [exp]	14.1	0.9298
AT3G12955			SAUR-like auxin-responsive pro...		Lus10031790 [exp]	17.0	0.9217
AT1G05060			unknown protein		Lus10030021 [exp]	21.9	0.9297
AT5G05950		MEE60	maternal effect embryo arrest ...		Lus10016474 [exp]	23.1	0.9294
AT5G60900		RLK1	receptor-like protein kinase 1...		Lus10036639 [exp]	24.2	0.9283

Compare expression of checked genes

Lus10042525 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.