Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G15870 340 / 5e-110 glycosyl hydrolase family 81 protein (.1) AT1G18310 305 / 1e-97 glycosyl hydrolase family 81 protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021987 [exp] 581 / 0 AT5G15870 949 / 0.0 glycosyl hydrolase family 81 protein (.1) Lus10038600 [exp] 78 / 5e-16 AT1G18310 50 / 4e-07 glycosyl hydrolase family 81 protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G105300 [exp] 391 / 6e-130 AT5G15870 897 / 0.0 glycosyl hydrolase family 81 protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0103 [flax] [poplar] Gal_mutarotase PF03639 [flax] [poplar] Glyco_hydro_81 Glycosyl hydrolase family 81 N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10042526 pacid=23181911 polypeptide=Lus10042526 locus=Lus10042526.g ID=Lus10042526.BGIv1.0 annot-version=v1.0 ATGGTACTCAAGAAGGTGAGCAGACGAGTCAAAACCTTAATTACTAACCCTTTCAATAAACGAAACCGTCCCTCTCCCTCCCCTCCTCCATATATTTCTC CTCCTCCTCAATCTCCGCCGTCACCTCCTCCTCCTCCTCCAATCATCACCGCCGCCGCCATGGCTCCTTTGAAACCATCATTCCCATATCTATTCCCTCA GCAGAACTCCACAGTCCTCCCGGACCCTTCACGCTTCTTCTCCCCTTCCCTCCTCTCTTCCCCACTCCCAACCAACTGCTTCTTCCAGAACTTCACCCTC AAGAATGGCGATCAGCCTGAGTACATCCATCCTTACCTCATCAAATCCTCCGACTCCTCCCTTTCCATCTCCTATCCATCTCTCTTCCACAACTCTTCCT TCACTTACCAGGCTTTCACCGCCGATCTCACGATCTCCGGTGATACACTTTCCCACAATCAGTCTTCTCATCTCATTACTTCCTACAGCGACCTCAGCGT CACTCTCGATCTCCCATCTTCCAATCTCCGGTTCTTCCTCGTCCGTGGAAGCCCCTTCGTCACTTGCTCCGTCGCTGATAATAAAAACAAAACCCTAATT TCAATCTCAACAATCCACGCCATCCTCTCTTGCTCTCCCACCTCCAATTCCGTCAACAAATACACCGTCAAGCTCAACAACAATCAGACCTGGCTAATCT ACTCATCCTCCCCCATCGTCAATCTCACCTACACTCCTTCTTCCATCTCCATCGCCGGCTTCTCCGGCATCCTGAGGATCGCGGTACTGCCTGACGAATC GGATCCAGATTCCGAATCAATCCTCGATCGGTTCAGCTCCTGCTATCCTATCTCAGGTGTCGCGGATTTCACGAAACCCTTCTCTGTTCAATACAAATGG GAAAAGAAAGGATGGGGGGATTTGCTTATGCTTGCGCATCCCTTGCATCTCAAGCTTTTATATGCTGACGTCGATTCCGACGTCACCATATTGGATGGGT TGAAGTACAGGAGTATGGACGGCGACCTCGTCGCCGTCGTCGGAGACTCGTGGTTATTGAAATCGGATCCTATTTCCGTCACCTGGCATTCGATTAAAGG AATCCGAGACGATTCCTATAATGAAATTGTTGATGCGCTTTGCAAGGATGTTGATGGATTGAATGCATCCGCCATAGTCGCCACGACGTCCTCTTACTTC TACGGGAAATTGATTGCGAGAGGAGCGAGATTAGCTTTGATAATGGGGTGGGATTGTTAA
AA sequence Show only first row Show all	>Lus10042526 pacid=23181911 polypeptide=Lus10042526 locus=Lus10042526.g ID=Lus10042526.BGIv1.0 annot-version=v1.0 MVLKKVSRRVKTLITNPFNKRNRPSPSPPPYISPPPQSPPSPPPPPPIITAAAMAPLKPSFPYLFPQQNSTVLPDPSRFFSPSLLSSPLPTNCFFQNFTL KNGDQPEYIHPYLIKSSDSSLSISYPSLFHNSSFTYQAFTADLTISGDTLSHNQSSHLITSYSDLSVTLDLPSSNLRFFLVRGSPFVTCSVADNKNKTLI SISTIHAILSCSPTSNSVNKYTVKLNNNQTWLIYSSSPIVNLTYTPSSISIAGFSGILRIAVLPDESDPDSESILDRFSSCYPISGVADFTKPFSVQYKW EKKGWGDLLMLAHPLHLKLLYADVDSDVTILDGLKYRSMDGDLVAVVGDSWLLKSDPISVTWHSIKGIRDDSYNEIVDALCKDVDGLNASAIVATTSSYF YGKLIARGARLALIMGWDC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G15870			glycosyl hydrolase family 81 p...		Lus10042526 [exp]	0	1
AT1G54790			GDSL-like Lipase/Acylhydrolase...		Lus10029980 [exp]	2.2	0.9605
AT1G63120		ATRBL2	RHOMBOID-like 2 (.1)		Lus10024497 [exp]	6.5	0.9541
AT3G59530		LAP3	LESS ADHERENT POLLEN 3, Calciu...		Lus10019377 [exp]	8.0	0.9430
AT5G15870			glycosyl hydrolase family 81 p...		Lus10042525 [exp]	8.7	0.9334
AT3G50760		GATL2	galacturonosyltransferase-like...		Lus10016302 [exp]	9.5	0.9441
AT2G44260			Plant protein of unknown funct...		Lus10017580 [exp]	11.9	0.9458
AT3G12955			SAUR-like auxin-responsive pro...		Lus10031790 [exp]	13.1	0.9369
AT2G38320		TBL34	TRICHOME BIREFRINGENCE-LIKE 34...		Lus10014238 [exp]	13.6	0.9451
AT2G45550		CYP76C4	"cytochrome P450, family 76, s...		Lus10008938 [exp]	14.3	0.9446
AT5G04010			F-box family protein (.1)		Lus10035421 [exp]	18.7	0.9391

Compare expression of checked genes

Lus10042526 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.