Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G17650 223 / 4e-73 Polyketide cyclase / dehydrase and lipid transport protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021724 [exp] 364 / 6e-129 AT4G17650 230 / 1e-75 Polyketide cyclase / dehydrase and lipid transport protein (.1) Lus10009758 [exp] 298 / 8e-103 AT4G17650 288 / 1e-98 Polyketide cyclase / dehydrase and lipid transport protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G126000 [exp] 258 / 4e-87 AT4G17650 288 / 2e-98 Polyketide cyclase / dehydrase and lipid transport protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF03364 [flax] [poplar] Polyketide_cyc Polyketide cyclase / dehydrase and lipid transport
Representative CDS sequence Show only first row Show all	>Lus10042651 pacid=23181695 polypeptide=Lus10042651 locus=Lus10042651.g ID=Lus10042651.BGIv1.0 annot-version=v1.0 ATGCCACCGTTCAGCTCAACTTCGAAAGCGTTCCGTTCTTTAATAGCCACTACGGCTCGATCGAGATATTTTATCCGCCCAGCCAAACACCATCAAATTC GATGCACCAGAACCGTTGCCGGAGTCTCGGCCCCATTGAGTAACACGGGAATCGATTGCCCTAGGTATTTCAATTCCACGTTTTTAGGGAGCTCGTACAG TGGGAGCAGTGCTGTTCAACGGAGGGGGTTCCTCGGGTGCGGAGATGGAGAGGAAGGCGGTGTTTTGTCTAAGGTCTACGAAGAGAGACGCGTTTTGGGA TATTCTCCTGAGCAATTGTTTGACGTGGTTGCGGCGGTCGATTTCTATCATGGGTTTGTGCCTTGGTGTCAGCGGTCTGACATCCTCAAACGTTACCCGG ATGGATCATTTGATGCCGAACTGGAGATTGGTTTCAAGTTTTTGGTGGAGAGCTATGTTTCTCACGTTGAATTGGAGAGACCAAAAATGCTCAAGACTAC GGCATCCCAGAGTGGTCTTTTTGATCACTTGATTAACATATGGGAATTTAACCCTGGACCTGTACCTGGCAGTTGTGATCTCTACTTTTTGGTAGATTTT AAGTTCCAGTCACCACTCTACAGACAGTTTATCCCTAGGAATATAATACTGAGTGCCAGCATGGTAGGTGATACTTTAAACATAAGCTGGAATTGGTGA
AA sequence Show only first row Show all	>Lus10042651 pacid=23181695 polypeptide=Lus10042651 locus=Lus10042651.g ID=Lus10042651.BGIv1.0 annot-version=v1.0 MPPFSSTSKAFRSLIATTARSRYFIRPAKHHQIRCTRTVAGVSAPLSNTGIDCPRYFNSTFLGSSYSGSSAVQRRGFLGCGDGEEGGVLSKVYEERRVLG YSPEQLFDVVAAVDFYHGFVPWCQRSDILKRYPDGSFDAELEIGFKFLVESYVSHVELERPKMLKTTASQSGLFDHLINIWEFNPGPVPGSCDLYFLVDF KFQSPLYRQFIPRNIILSASMVGDTLNISWNW

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G17650			Polyketide cyclase / dehydrase...		Lus10042651 [exp]	0	1
AT1G68140			Protein of unknown function (D...		Lus10020957 [exp]	8.5	0.7960
AT1G08750			Peptidase C13 family (.1.2.3)		Lus10006571 [exp]	9.9	0.8146
AT1G59900		AT-E1 ALPHA, AT...	pyruvate dehydrogenase complex...		Lus10030820 [exp]	12.0	0.8313
AT3G08780			unknown protein		Lus10014237 [exp]	16.1	0.8228
AT4G31080			Protein of unknown function (D...		Lus10020370 [exp]	17.2	0.7642
AT2G24290			Protein of unknown function (D...		Lus10036299 [exp]	17.9	0.7719
AT2G24290			Protein of unknown function (D...		Lus10019053 [exp]	21.8	0.7632
AT4G35260		IDH-I, IDH1	isocitrate dehydrogenase I, is...		Lus10028374 [exp]	22.1	0.8058
AT3G53390			Transducin/WD40 repeat-like su...		Lus10026500 [exp]	23.5	0.7742
AT2G01420		PIN4, ATPIN4	ARABIDOPSIS PIN-FORMED 4, Auxi...		Lus10009686 [exp]	28.7	0.7293

Compare expression of checked genes

Lus10042651 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.