Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G21740 76 / 4e-15 Protein of unknown function (DUF630 and DUF632) (.1) AT1G77500 72 / 8e-14 Protein of unknown function (DUF630 and DUF632) (.1) AT4G35240 49 / 2e-06 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) AT2G19090 46 / 2e-05 Protein of unknown function (DUF630 and DUF632) (.1) AT4G30130 43 / 0.0002 Protein of unknown function (DUF630 and DUF632) (.1) AT2G34670 42 / 0.0004 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) AT1G20530 41 / 0.001 Protein of unknown function (DUF630 and DUF632) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10029683 [exp] 114 / 2e-28 AT1G21740 696 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Lus10014445 [exp] 48 / 7e-06 AT4G35240 712 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) Lus10016004 [exp] 44 / 8e-05 AT4G35240 253 / 1e-75 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) Lus10015534 [exp] 44 / 0.0001 AT2G19090 480 / 4e-160 Protein of unknown function (DUF630 and DUF632) (.1) Lus10020008 [exp] 43 / 0.0001 AT2G19090 214 / 6e-63 Protein of unknown function (DUF630 and DUF632) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G082000 [exp] 83 / 1e-17 AT1G21740 644 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.005G179100 [exp] 80 / 2e-16 AT1G21740 617 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.009G142900 [exp] 52 / 2e-07 AT4G35240 621 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) Potri.005G070200 [exp] 49 / 2e-06 AT1G21740 315 / 3e-94 Protein of unknown function (DUF630 and DUF632) (.1) Potri.004G182900 [exp] 45 / 5e-05 AT4G35240 639 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) Potri.007G090300 [exp] 44 / 8e-05 AT4G39790 556 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.005G077700 [exp] 44 / 0.0001 AT4G39790 546 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.005G249400 [exp] 43 / 0.0002 AT1G20530 359 / 9e-116 Protein of unknown function (DUF630 and DUF632) (.1) Potri.002G011700 [exp] 43 / 0.0002 AT4G35240 348 / 5e-109 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) Potri.009G159000 [exp] 43 / 0.0002 AT2G27090 746 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04783 [flax] [poplar] DUF630 Protein of unknown function (DUF630)
Representative CDS sequence Show only first row Show all	>Lus10042723 pacid=23181827 polypeptide=Lus10042723 locus=Lus10042723.g ID=Lus10042723.BGIv1.0 annot-version=v1.0 ATGGGCTGCGGAGGTTCCAAGGTTGACGACCTCCCTCTAGTAATCCTCTGCAGAGAGCGCAAGCACTGCATCAAAGCTGCCTCCGACCACCGCTTAGCCC TCGCTGCCGCACATCTCTCCTACTTCCACTCCCTCCACGATGTCGGCGACGCCATCCGAAAATTCGTCGACGAGGAGCTTGTCCTCGCCTCCGCCGCCAC TAATACATCCTCTTCCTCCCCCGGATCCCCTGTCCTCACCCTTCCTCCCCGCGACGGCGGAAAATCGAAACTGAAATCCAAATCCAAATCCACCTCTTCC TCCACCTCCATCTCTCACTCCGTCGATGGCGACAGCTACCGCGATCACAATAACAACCGATCCGTCAAGGTTAAGAACAGTAACAAGAAGAAGAACAACC ACCATCAACATCAGGATCACCACCACCATCACTACCACGACGACGACGACGACGATGGAGATTCCCACTTGCATTTATCCTCTTCCGATTCGGACTTGGA TTCCGACTCCAGTCACGGCAATTTCCACCATCATCATGAGAATCCAGAACGCGAAGAGGAGTTCAGAGGTCCGATGGGACGCGAAATGGAGATGCCGTCG ACTTCCTACGGCGATTTCAACAATTATCCTGCTCAGGGAAATTGGGGTTACGGTGGCTACACAGGGGAACCCATTCCTCCGACTAATCCCTACCCGTACG CGGAACCGTATGCAAATCCCTACCCGTACCCTGCTCCTTATTCAAACCCCTACCCGGATGTGAACCCGTATAACCCTACCATAAACCCTTACGCAAATCA GAACATGTATTACATGAAAAGGTCGACCACGCCGGCGAAAACCGTCGTCACATGA
AA sequence Show only first row Show all	>Lus10042723 pacid=23181827 polypeptide=Lus10042723 locus=Lus10042723.g ID=Lus10042723.BGIv1.0 annot-version=v1.0 MGCGGSKVDDLPLVILCRERKHCIKAASDHRLALAAAHLSYFHSLHDVGDAIRKFVDEELVLASAATNTSSSSPGSPVLTLPPRDGGKSKLKSKSKSTSS STSISHSVDGDSYRDHNNNRSVKVKNSNKKKNNHHQHQDHHHHHYHDDDDDDGDSHLHLSSSDSDLDSDSSHGNFHHHHENPEREEEFRGPMGREMEMPS TSYGDFNNYPAQGNWGYGGYTGEPIPPTNPYPYAEPYANPYPYPAPYSNPYPDVNPYNPTINPYANQNMYYMKRSTTPAKTVVT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G77500			Protein of unknown function (D...		Lus10042723 [exp]	0	1
AT1G21740			Protein of unknown function (D...		Lus10042722 [exp]	1.0	0.8894
AT1G21740			Protein of unknown function (D...		Lus10029683 [exp]	3.7	0.8514
AT4G29000	CPP		Tesmin/TSO1-like CXC domain-co...		Lus10011693 [exp]	4.9	0.8678
AT3G33520		SUF3, ESD1, ATA...	SUPPRESSOR OF FRI 3, EARLY IN ...		Lus10006654 [exp]	8.4	0.8123
AT3G49600		SUP32, ATUBP26,...	ubiquitin-specific protease 26...		Lus10029686 [exp]	9.0	0.8736
					Lus10004928 [exp]	13.4	0.7553
AT3G17360		POK1	phragmoplast orienting kinesin...		Lus10017113 [exp]	15.5	0.8834
AT2G46380			Protein of unknown function (D...		Lus10005153 [exp]	17.7	0.8485
AT5G63810		BGAL10	beta-galactosidase 10 (.1)		Lus10025108 [exp]	18.3	0.8073
AT2G38620		CDKB1;2	cyclin-dependent kinase B1;2 (...		Lus10035614 [exp]	20.8	0.8347

Compare expression of checked genes

Lus10042723 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.