Lus10042959 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10042959 pacid=23168200 polypeptide=Lus10042959 locus=Lus10042959.g ID=Lus10042959.BGIv1.0 annot-version=v1.0
ATGTCTGGAGCGGAGGAGCTCTGGGAGCGGTTAGTGCGTGCTGCACTAAGGAGCGAAAGAACTCGATCTGCTGCATTTGCTGGTGCTGTTACTGGGATTG
CTGGAAACGTCCCTTCTTCACTTGAGAACAACAGGGATATAGATGACATTTTGAGAGCTGCTGATGAAATTGAAGACGAAGATCCAAACATCTCTAGAAT
CCTTTGTGAGCATGGTTATTCACTTGCACAAAATTTGGACCCTGATAGTGAAAGAAGAGGCGTTCTACAGTTCAAGACAGGTCTGATGTCTGTTATTAAG
CAAAAACTTACAAAGAGAGAGGGTGGAACAATAGATAGAGGCCAAGACATTGCACGTTTACAGGAATTCTACAAGCTATACAGAGAGCGTAACAGAGTAG
ATACGTTAAAAGAAGAGGAAATGAAACTGCGGGAATCCAGTGCTTTCAGTGGAAATTTGGGCGAGTTGGAGCGAAGAACTATTAGACGGAAAAGAGTATT
TGCAACTCTAAAAGTCTTGGGGTCAGTTCTTCAGAAGTTGAATAAGGATATGCCTGACGAGCTGAGTAGGATGATTGAATCAGATGCATCTATGTCAGAA
GACCTGATTGCTTATAACATTATTCCTCTTGATCTTCAAACTGTAACGAATGCTGTTGTGGCTTTCCCTGAGGTTCGAGCAGCTGTGTCTTCTTTGAAAT
ATTTCCGAGGTCTGCCGATTTTGCCCGAGAGTTTTCCTATTCCATCCACGAGAGCTTCTGATATGTTCGATTTTCTGCACTATGTTTTTGGTTTTCAGAA
AGATAATGTCTCTAATCAGCGAGAGAACGTAGTTCACCTACTCGCAAATGAGCAATCTCGACTGGGTATACCTGATGCAACTGAACCAAAACTAGATGAA
GCTGCTGTACAGAACGTGTTTATGAAGGCACTTGAAAATTATATCAATTGGTGCAGCTATTTGTGCATTCAGCCTGTTTCGAGCAATTTGGAAGCTTTAA
GCACAGAAAAGAAGTTGCTCTATGTTTCTCTGTACTTCCTTATATGGGGTGAGGCTGCCAATATCAGATTTCTTCCAGAATGTTTGTGCTACATATTTCA
CCATATGGCTAGGGAAATGGATGAGATGTTGAGGCAGCAAAATGCAGAATTTGCGAATAGTTGCTGTTCTGAGGGTGGTGCCTGCGTATCATTCCTTGAT
CAAGTTATTCTCCCTTTATATGGGGTGATTTCAGCTGAAGCTTCAAACAATGACAATGGTCGGGCGGCTCATTCTGCTTGGAGAAACTATGACGATTTCA
ATGAGTACTTTTGGTCACTTCACTGTTTTGACCTCAGTTGGCCATGGCGTCTCAGTTCAACTTTTTTCAAGAAGCCCAACCCAAGGACCAAGGGGCTTGC
AATAATTGCTTTCAATGATGGCCGCTTCAACACTAGGACTCTCAGAGAAATTCTAAGTCTTGGTCCAACATTTGTTGTGATGAAGTTTTCTGAGAGTGTA
TTGGATGTCCTCATGATGTATGGTGCTTACTCAACAACACGGCATGTGGCTGTTTCTCGAATTCTTCTTAGATTCGTTTGGTTCGCCTGTGCTTCTGTCT
TCATATGTTTCCTTTATGTGAAAGCCTTACAGGAGCCAGATACAAGTTCAGTCCTTTTCAAGCTATATGTTATTGTTATAGGAATTTATGCTGGTGTCCA
GTTTTTCCTAGGTTTCTTAACGCGTATCCCGGCTTGTCACCTCATGACTAATCAATGTGATCAGTGGTCACTCGTTCGATTTGTAAAATGGATGCGCCAG
GAACGATACTATGTCGGTCGTGGAATGTATGAACGAACTAGTGATTTCATCAAGTACATGGTTTTTTGGCTTGTCATCCTGAGTGCAAAATTTTCTTTCG
CATATTTCCTTCAGATCAAACCATTGGTGGAACCAACCAAGATTATAGTCAAGATGACTGATAATATCCAATATTCTTGGCATGACCTTGTTTCTAAAAA
TAATCATAATGCCCTGACAATTGTGAGCCTTTGGGCTCCCGTGGTTGCTATCCGGTCATTGGAATCTGTGCACAAACTTTTTGAGGAGTTCCCTATAGCT
TTTATGAGAACTCTCCATTCTAATAGGACTGTTGGCAACGCTCCCCAGCCTGTTGAGGAGAGAAAGATTAATGCAGCCCAATTTTCCCCATTTTGGAACG
AGATCATAAAGAACCTGAGGGAAGAAGATTATATTGCAAATTTTGAACTGGAATTGCTTCAAATGCCCAGAAATTCTGGGAATCTTCCATTGGTTCAGTG
GCCACTTTTTCTTCTTGCCAACAAGATATTTTTGGCCAGGGATATTGCTGCAGAAAGTAGAGATTCCCAACTAGAGTTGTGGGAGAGGATTTCACGTGAT
GAGTATATGAAGTATGCTGTTGAGGAGTGTTACCATGCTCTTAGATATATTCTTACAGAAATATTTGAAGGCGAAGGAAGGATGTGGGTTGAAAGAGTGT
ACGAGGACATACAAGCAAGCATACAGAACAGGAGTATTCATGTTGACTTTCAGTTGACTAAGCTGGCACTTGTTATTCAACGAGTAACTGCTCTAATGGG
AGTTTTAAAAGAGGCAGAAACTTCTGATATGGAAAAAGGTGCAATCAAGGCTGTTCAAGATCTATATTATTTTTTTCAGCATGATGGCCTTTCTATCGAC
AAAAGGGAACATTATGACACTTGGAATTTGCTGTCAAAGGCAAGAACCGAAGGACGATTATTTACAAACTTGAAGTGGCCTCGTGATCCGGAATTGAGAA
CACAAATTAAAAGACTGCATTCACTTTTAACAATCAAAGATTCTGCTGCAAATGTTCCCAACAACATTGAAGCCAGGCGTAGACTGGAGTTCTTCACAAA
TTCACTTTTCATGGACATGCCACTTGCAAAGCCCGTACGGGAGATGCTCTCCTTCAGTGTCTTTACTCCATATTATTCAGAGATTGTTCTTTATAGCATG
GCTGAGCTTCTTAAGAAAAACGAGGATGGAATATCAATTCTGTTTTACCTGCAGAAAATTTATCCAGATGAGTGGAAGAATTTTCTTGCTCGAATTGGAC
GTGATGAAAATTCTGTCGATACTGAACTGTTCGATAGTCCTACAGACATCCTTGAGCTTCGGTTTTGGGCTTCATATAGGGGGCAAACATTAGCTCGCAC
AGTACGGGGGATGATGTACTACAGGAAGGCTATCATGCTTCAAAGTTACTTGGAAAGAGGGACTGCTCAAGATGTGGAAGCTGCTATTGGCAGTAAAGAT
GCTACCGATACCCAAGGTTTCGAGTTGTCTCCTGAAGCCAGAGCTCAGGCAGATATAAAGTTTACATACGTGGTGACTTGCCAAATATATGGAAAACAAA
AGGAAGAGCAGAAACCTGAGGCTGCTGATATTGCACTGCTTATGCAAAGAAATGAAGCTCTTCGTGTTGCCTTTATTGATGAAGTTGAAACGTTGAAAGA
GGGTCGTCATGTGCAGAGAGAATTCTTCTCAAAACTCGTTAAAGCTGATATCAATGGGAAAGATAAGGATAATTATTTTGAAGAAGCCTTGAAAATGCGA
AATCTACTTGAAGAATTTCATCGTGATCACGGTATTCGCTCTGCAACAATTCTTGGTGTCAGGGAACATGTATTTACTGGAAGTGTGTCTTCTTTAGCCT
CTTTTATGTCAAACCAAGAAACAAGCTTTGTAACTCTTGGTCAGCGAGTTCTGTCTAATCCTTTGAAGGTCCGAATGCATTATGGTCATCCAGATGTTTT
TGACAGAGTTTTCCACATTACACGTGGTGGTATAAGCAAGGCTTCCCGCGTTATTAATATCAGTGAAGATATATTTGCAGGTTTCAATTCGACCTTGCGC
CAAGGAAACATTACACACCATGAGTACATACAGGTTGGAAAAGGACGAGATGTTGGTCTCAATCAGATTGCTGTATTTGAAGGAAAGGTAGCTGGTGGCA
ATGGCGAGCAGGTTCTTAGCCGGGATGTTTTCAGGCTTGGACAGCTGTTTGATTTCTTCAGAATGATGTCTTTTTACTTCACCACTGTGGGATATTACTT
CTGCACAATGTTAACTGTGCTGACCGTGTACATGTTCTTGTATGGGAAGGCATATTTGGCTCTATCTGGAGTTGGTGAAACTATCCAAGAGAGAGCCCAA
ATATTGCAGAATACGGCCTTGAGCGCAGCTCTAAATACACAGTTTCTCTTTCAGATTGGTATTTTTACTGCTGTGCCAATGGTCTTGGGCTTCATCTTGG
AACAGGGATTCCTAAGGGCAGTTGTCAGTTTTATCACAATGCAACTTCAACTTTGTTCTGTCTTCTTTACATTCTCTTTGGGCACAAAGACACACTACTT
TGGACGAACTATTCTTCATGGTGGCGCAAGGTACCAAGCTACTGGTAGGGGATTTGTGGTTCGCCATATTAAGTTCTCTGAAAACTACCGCCTTTATTCC
CGGAGTCATTTTGTTAAGGGGTATCCATCTTCCTCTGTGTCTACCTGTTTCTCAGCTCGTAATAGGTTCTTGATGGAACTTGGTATAACTCGTCCAATTA
TCTTTGTACGCAGACTAGAAGTTGCAGTTTTGCTGATTGTATACCTTGCTTATGGCTACAATGAAGGTGGAGCGCTCTCCTATATTCTCCTTACAGTTAG
CAGTTGGTTTATGGCCCTCTCCTGGTTGTACGCCCCCTATTTGTTCAATCCATCAGGATTCGAATGGCAGAAAACGGTCGAGGACTTCAGAGATTGGACA
AATTGGCTTCTTTACAGAGGTGGAATTGGGGTGAAGGGTGAAGAAAGCTGGGAAGCTTGGTGGGAGGAAGAACTGGCACATATCAGAACTTTTAGCGGGA
GGATCATGGAGACAATTCTGAGTCTCCGATTTTTCATTTTCCAGTATGGTATTATATACAAGCTTGATGTTCAAAGAAATGATACTTCTTTAACCGTGTA
CGGTATATCATGGGCTGTGTTGGCAGTGCTTATAATACTCTTCAAGGTTTTCACTTTCAGTCAGAAGATATCTGTAAACTTTCAGCTTCTGCTTCGATTC
ATCCAAGGGGTTGCCTTTTTGTTGGCTTTGGCGGGTTTAGCTGTTGCAGTTGTGTTCACGAACCTTTCGGTTCCAGACATATTTGCTTGCATTCTAGCTT
TCATCCCTACTGGATGGGGAATCTTATCGATAGCTGCAGCTTGGAAACCATTGATGAAGAAGATTGGTCTATGGAAGTCTATCCGTTCAATTGCCCGTCT
GTATGATGCCGGAATGGGAATGATCATCTTCATACCAATCGCATTCTTTTCGTGGTTCCCGTTCATGTCGACATTCCAAACCCGCCTCATGTTCAACCAA
GCGTTCAGCCGAGGCTTGGAAATTTCTCTGATTCTAGCAGGAAACAACCCCAATACAAGTTGTGCTGTTGCTGGCCTTGTGAGCTTAAGCCCCTTCAGTG
CCCGCTTGGTGCTTGACTTTGACCGCTGCAGGTTGGCTCTTATTCTCCGTGCATCTCTCGTCGTGATCACCCCTCCATCGATCTCTGAGGTGGTGGTTCT
CGATGACCCCGATCTCATCCACGTGAACTTCTTCTGGATCCTAGTTGTGGCGAATAAGCTCCGCCATAGGCTCTTGTTGGATGAGAGGAGGCAGAGCTCT
CCGATGAGAGGAAGGCAGAGCTCTCCGATGAGAGGAAGGCAGAGCTCTCCGTGA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10042959 pacid=23168200 polypeptide=Lus10042959 locus=Lus10042959.g ID=Lus10042959.BGIv1.0 annot-version=v1.0
MSGAEELWERLVRAALRSERTRSAAFAGAVTGIAGNVPSSLENNRDIDDILRAADEIEDEDPNISRILCEHGYSLAQNLDPDSERRGVLQFKTGLMSVIK
QKLTKREGGTIDRGQDIARLQEFYKLYRERNRVDTLKEEEMKLRESSAFSGNLGELERRTIRRKRVFATLKVLGSVLQKLNKDMPDELSRMIESDASMSE
DLIAYNIIPLDLQTVTNAVVAFPEVRAAVSSLKYFRGLPILPESFPIPSTRASDMFDFLHYVFGFQKDNVSNQRENVVHLLANEQSRLGIPDATEPKLDE
AAVQNVFMKALENYINWCSYLCIQPVSSNLEALSTEKKLLYVSLYFLIWGEAANIRFLPECLCYIFHHMAREMDEMLRQQNAEFANSCCSEGGACVSFLD
QVILPLYGVISAEASNNDNGRAAHSAWRNYDDFNEYFWSLHCFDLSWPWRLSSTFFKKPNPRTKGLAIIAFNDGRFNTRTLREILSLGPTFVVMKFSESV
LDVLMMYGAYSTTRHVAVSRILLRFVWFACASVFICFLYVKALQEPDTSSVLFKLYVIVIGIYAGVQFFLGFLTRIPACHLMTNQCDQWSLVRFVKWMRQ
ERYYVGRGMYERTSDFIKYMVFWLVILSAKFSFAYFLQIKPLVEPTKIIVKMTDNIQYSWHDLVSKNNHNALTIVSLWAPVVAIRSLESVHKLFEEFPIA
FMRTLHSNRTVGNAPQPVEERKINAAQFSPFWNEIIKNLREEDYIANFELELLQMPRNSGNLPLVQWPLFLLANKIFLARDIAAESRDSQLELWERISRD
EYMKYAVEECYHALRYILTEIFEGEGRMWVERVYEDIQASIQNRSIHVDFQLTKLALVIQRVTALMGVLKEAETSDMEKGAIKAVQDLYYFFQHDGLSID
KREHYDTWNLLSKARTEGRLFTNLKWPRDPELRTQIKRLHSLLTIKDSAANVPNNIEARRRLEFFTNSLFMDMPLAKPVREMLSFSVFTPYYSEIVLYSM
AELLKKNEDGISILFYLQKIYPDEWKNFLARIGRDENSVDTELFDSPTDILELRFWASYRGQTLARTVRGMMYYRKAIMLQSYLERGTAQDVEAAIGSKD
ATDTQGFELSPEARAQADIKFTYVVTCQIYGKQKEEQKPEAADIALLMQRNEALRVAFIDEVETLKEGRHVQREFFSKLVKADINGKDKDNYFEEALKMR
NLLEEFHRDHGIRSATILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLSNPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIFAGFNSTLR
QGNITHHEYIQVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDVFRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYMFLYGKAYLALSGVGETIQERAQ
ILQNTALSAALNTQFLFQIGIFTAVPMVLGFILEQGFLRAVVSFITMQLQLCSVFFTFSLGTKTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYS
RSHFVKGYPSSSVSTCFSARNRFLMELGITRPIIFVRRLEVAVLLIVYLAYGYNEGGALSYILLTVSSWFMALSWLYAPYLFNPSGFEWQKTVEDFRDWT
NWLLYRGGIGVKGEESWEAWWEEELAHIRTFSGRIMETILSLRFFIFQYGIIYKLDVQRNDTSLTVYGISWAVLAVLIILFKVFTFSQKISVNFQLLLRF
IQGVAFLLALAGLAVAVVFTNLSVPDIFACILAFIPTGWGILSIAAAWKPLMKKIGLWKSIRSIARLYDAGMGMIIFIPIAFFSWFPFMSTFQTRLMFNQ
AFSRGLEISLILAGNNPNTSCAVAGLVSLSPFSARLVLDFDRCRLALILRASLVVITPPSISEVVVLDDPDLIHVNFFWILVVANKLRHRLLLDERRQSS
PMRGRQSSPMRGRQSSP
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10042959 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.