Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G53760 699 / 0 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT1G26700 670 / 0 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT1G11000 370 / 2e-121 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT2G44110 288 / 7e-91 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G02600 288 / 2e-90 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G17430 285 / 2e-89 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G33670 277 / 1e-86 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G61560 279 / 3e-86 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G42560 272 / 5e-85 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT4G24250 269 / 1e-83 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032669 [exp] 1020 / 0 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10030729 [exp] 285 / 1e-89 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10026276 [exp] 284 / 5e-89 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10036519 [exp] 281 / 8e-87 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 281 / 8e-87 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10013211 [exp] 275 / 3e-85 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10008340 [exp] 273 / 5e-85 AT4G02600 576 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10027093 [exp] 268 / 6e-83 AT4G02600 580 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10028440 [exp] 270 / 9e-83 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G402400 [exp] 773 / 0 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 669 / 0 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.004G218500 [exp] 374 / 3e-123 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.005G111400 [exp] 326 / 5e-105 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.013G069900 [exp] 305 / 4e-97 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.001G078800 [exp] 290 / 1e-91 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 290 / 2e-90 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 281 / 1e-87 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.017G000800 [exp] 279 / 2e-87 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 279 / 2e-87 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10043085 pacid=23168440 polypeptide=Lus10043085 locus=Lus10043085.g ID=Lus10043085.BGIv1.0 annot-version=v1.0 ATGGCAGAAGATGGCGAGCAGGCAACAGGGGAGTCAAAAGAAATGCGCTCTTTGGCCCTGACTCCAACTTGGTCGGTTGCAACAGTGTTAACTGTCTTTG TGGTTGTTTCTTTGATAGTGGAGCGCTCTATTCATCGTTTAAGTAATTGGTTGCGGAAAACTAACCGGAAACCTTTGCTTGCTGCGGTGGAAAAAATGAA AGAAGCAACCTCAAGCCTAATAGCCAATATTTGCATTCCGTCAAAGTTTTACAATAGTAGCTTTGCTCCTTGCACAAGGGCTCAGATTGATGAAGAAATG GAAGAGAATTCTTCACAGGGTCGCAAGCTGTCGATGCTTTCTGGTACCCATTTCCGTAGAGTTCTGAATAGCTTGGAGCAGAACAACTGTCATAAGGGAC ATGAACCATTTGTGTCGTATCAAGGCCTTGAACAGTTGCACCGCTTCATCTTTGTCATGGCTATCACACATATATCCTACAGCTGCCTAACAATGTTGCT GGCTATTGTTAAGATTCATCGGTGGAGGCTGTGGGAACTTGAAGCTTATATGGACCGACATGATGTGTTAACAGAGATCACACGAGAGAAGACATTCCAA AGGCAAACCACTTTCATTGGATATGCTCCATCAAGCCCTTGGGCAAAGAGCAGGCTTCTCATGTGGGTGACTTGTTTCTTCCGGCAATTTGGGCATTCAG TTGTCCGATCAGATTACTTGATTCTCCGCAAAGGCTTTATCACGAATCACCACCTTTCACCGAGATACGATTTTCATAGCTATATGATTCGCTCCATGGA AGAGGAATTCCCAAGCATAGTTGGTGTTAGTGGTCCATTGTGGGGATTTGTTGTCGCTTTTATGCTGTTCAATATTAAAGGGTCTAATCTTTATTTCTGG ATAGCTATCATTCCGATAACTGGCGGTCATTTATGTCTTCTTCTGCTTCTTGTTCAGCTCGTGCTTCTGGTTGGCACAAAGTTGCAGCACGTAATTGCAA CTCTGACATTGGAGAATGCCGGTATCTCTGGATATTTCGCTGGAGCGAAGCTGAAACCCAGAGATGATCTTTTCTGGTTTAAAAAACCTGAATTGCTACT GTCCTTAATCCACTTTATTTTGTTCCAGAATGCATTTGAGCTGGCTTCCTTCTTTTGGTTCTGGTGGCAATTCGGATACAATTCCTGTTTCATAAGGAAC CATACTCTCGTTTACATACGTCTCATATTAGGGTTTGCAGGTCAATTTCTTTGCAGCTACAGTACCCTGCCTCTGTACGCGCTAGTCACTCAGATGGGGA CGAACTACAAGGCGGCTTTAATCCCACAGATGATAAGAGAAACGATCCACGGATGGGGAAAGGCTGCTAGGAGGAAGAGAAGACACGGATTCACGGACGA TTCGACCATCCGGACAGACACAAGCACGGTAATGTCGCTCGAGGAAGACGATCACCGGTGTCTCGATCTTGCTGAGGCTACCGCTCATCTAGGGAACGGC ATCGAGCTGCAGCCAACGTCTCGCACTGCAGCAACCAGCCCTCTCGGTCCTGTTCCGAATGAAACTTCGAGCCGAGTAGGCACCCCACTCCTCCGACCTT CTGCCTCCTCCATTTCGTCGCCGATTGTTTCGAGAATCATAGCGGAAGACAGTTTTCCTAGGTCGTCGTCTATGCCTACCGCCACTAGAAGATAA
AA sequence Show only first row Show all	>Lus10043085 pacid=23168440 polypeptide=Lus10043085 locus=Lus10043085.g ID=Lus10043085.BGIv1.0 annot-version=v1.0 MAEDGEQATGESKEMRSLALTPTWSVATVLTVFVVVSLIVERSIHRLSNWLRKTNRKPLLAAVEKMKEATSSLIANICIPSKFYNSSFAPCTRAQIDEEM EENSSQGRKLSMLSGTHFRRVLNSLEQNNCHKGHEPFVSYQGLEQLHRFIFVMAITHISYSCLTMLLAIVKIHRWRLWELEAYMDRHDVLTEITREKTFQ RQTTFIGYAPSSPWAKSRLLMWVTCFFRQFGHSVVRSDYLILRKGFITNHHLSPRYDFHSYMIRSMEEEFPSIVGVSGPLWGFVVAFMLFNIKGSNLYFW IAIIPITGGHLCLLLLLVQLVLLVGTKLQHVIATLTLENAGISGYFAGAKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRN HTLVYIRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQMIRETIHGWGKAARRKRRHGFTDDSTIRTDTSTVMSLEEDDHRCLDLAEATAHLGNG IELQPTSRTAATSPLGPVPNETSSRVGTPLLRPSASSISSPIVSRIIAEDSFPRSSSMPTATRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G53760		ATMLO11, MLO11	MILDEW RESISTANCE LOCUS O 11, ...		Lus10043085 [exp]	0	1
AT5G10320			unknown protein		Lus10000634 [exp]	10.7	0.7294
AT4G26100		CKL1, CK1	casein kinase 1 (.1)		Lus10011940 [exp]	20.6	0.7274
AT1G03090		MCCA	methylcrotonyl-CoA carboxylase...		Lus10022077 [exp]	29.2	0.7045
AT1G10120	bHLH	bHLH074, CIB4	basic helix-loop-helix (bHLH) ...		Lus10012484 [exp]	33.6	0.6890
AT3G15410			Leucine-rich repeat (LRR) fami...		Lus10032668 [exp]	39.4	0.6741
AT1G20410			Pseudouridine synthase family ...		Lus10005645 [exp]	40.5	0.6777
AT1G70250			receptor serine/threonine kina...		Lus10008335 [exp]	40.6	0.6687
AT5G45790			Ubiquitin carboxyl-terminal hy...		Lus10014590 [exp]	54.1	0.6391
AT1G08720		EDR1, ATEDR1	ENHANCED DISEASE RESISTANCE 1,...		Lus10000937 [exp]	71.2	0.6649
AT3G21215			RNA-binding (RRM/RBD/RNP motif...		Lus10033388 [exp]	81.5	0.6457

Compare expression of checked genes

Lus10043085 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.