Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43330 90 / 2e-21 ATINT1 inositol transporter 1 (.1) AT1G30220 74 / 1e-15 ATINT2 ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 (.1) AT4G16480 72 / 4e-15 ATINT4 inositol transporter 4 (.1) AT2G35740 67 / 2e-13 ATINT3 nositol transporter 3 (.1) AT4G36670 41 / 0.0002 AtPMT6, AtPLT6 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) AT2G20780 40 / 0.0005 AtPLT4 Major facilitator superfamily protein (.1) AT3G18830 40 / 0.0006 ATPMT5, AtPLT5 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025565 [exp] 93 / 3e-22 AT2G43330 768 / 0.0 inositol transporter 1 (.1) Lus10027026 [exp] 93 / 3e-22 AT2G43330 769 / 0.0 inositol transporter 1 (.1) Lus10010501 [exp] 77 / 1e-16 AT4G16480 755 / 0.0 inositol transporter 4 (.1) Lus10038808 [exp] 76 / 2e-16 AT4G16480 760 / 0.0 inositol transporter 4 (.1) Lus10039050 [exp] 76 / 3e-16 AT4G16480 769 / 0.0 inositol transporter 4 (.1) Lus10010500 [exp] 75 / 7e-16 AT4G16480 823 / 0.0 inositol transporter 4 (.1) Lus10017561 [exp] 74 / 1e-15 AT4G16480 820 / 0.0 inositol transporter 4 (.1) Lus10042820 [exp] 74 / 1e-15 AT1G30220 890 / 0.0 ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 (.1) Lus10028118 [exp] 74 / 1e-15 AT1G30220 893 / 0.0 ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G126800 [exp] 95 / 4e-23 AT2G43330 710 / 0.0 inositol transporter 1 (.1) Potri.017G032200 [exp] 95 / 4e-23 AT2G43330 743 / 0.0 inositol transporter 1 (.1) Potri.006G015200 [exp] 74 / 1e-15 AT4G16480 811 / 0.0 inositol transporter 4 (.1) Potri.006G015300 [exp] 73 / 2e-15 AT4G16480 788 / 0.0 inositol transporter 4 (.1) Potri.016G010600 [exp] 72 / 5e-15 AT4G16480 825 / 0.0 inositol transporter 4 (.1) Potri.007G027900 [exp] 44 / 2e-05 AT4G36670 638 / 0.0 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) Potri.004G133340 [exp] 43 / 4e-05 AT1G30220 354 / 6e-120 ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 (.1) Potri.013G135200 [exp] 42 / 0.0001 AT2G20780 747 / 0.0 Major facilitator superfamily protein (.1) Potri.006G158700 [exp] 40 / 0.0003 AT3G18830 477 / 6e-165 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.004G039100 [exp] 40 / 0.0006 AT2G20780 647 / 0.0 Major facilitator superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10043119 pacid=23168444 polypeptide=Lus10043119 locus=Lus10043119.g ID=Lus10043119.BGIv1.0 annot-version=v1.0 ATGGGGAGCTCTGGGGATATATTGGCAGAGAGAGAGAGGAGGAGAATGTCTTATTCCAGCAATCCGTACGTGTTGAGATTGACTCTCATTGCTGGAATCA GCGGTCTGCTCTTCGGCTACGATACCGGTGTTATCTCAGGGGCCCTTCTTTACATCAAAGATGAGTTTGAGGTGGTCAATCAAAGCACTTTCCTTCAGTC TAATGAGGTAACGAAACGACAAAGGGAGACACCGTGTTGGCACTTACGGACCGCGCAGGGGGAAGGTGTGTTGTCAAATTTGGTCGATGCACCGCAACCC CCGCTTGGCTCTATGCAGCTGGGCGGGTCGCCCCAGGCTGACCCGCGTGGACCACATTTTTCGAAACGTCGGTTGTCTTTCTCGGCGATTTGGAAGATTT TCTCCCAATACCGTACTCGATGTTTATATCGCTGGTCTGATGACCTCCTCTGCGCCTCTTCCGCTCTTCAGACACCTCCACCTTACAAAGGCCGCGGCAA TATGAGCTCAGAAGTACCATAG
AA sequence Show only first row Show all	>Lus10043119 pacid=23168444 polypeptide=Lus10043119 locus=Lus10043119.g ID=Lus10043119.BGIv1.0 annot-version=v1.0 MGSSGDILAERERRRMSYSSNPYVLRLTLIAGISGLLFGYDTGVISGALLYIKDEFEVVNQSTFLQSNEVTKRQRETPCWHLRTAQGEGVLSNLVDAPQP PLGSMQLGGSPQADPRGPHFSKRRLSFSAIWKIFSQYRTRCLYRWSDDLLCASSALQTPPPYKGRGNMSSEVP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43330		ATINT1	inositol transporter 1 (.1)		Lus10043119 [exp]	0	1
AT2G16980			Major facilitator superfamily ...		Lus10005626 [exp]	1.4	0.9114
AT5G50260		CEP1	cysteine endopeptidase 1, Cyst...		Lus10018083 [exp]	4.5	0.9011
AT1G11910		ATAPA1, APA1	aspartic proteinase A1 (.1)		Lus10015547 [exp]	5.3	0.8452
AT5G50260		CEP1	cysteine endopeptidase 1, Cyst...		Lus10042078 [exp]	10.5	0.8792
AT2G04160		AIR3	AUXIN-INDUCED IN ROOT CULTURES...		Lus10006505 [exp]	14.7	0.8448
AT3G02430			Protein of unknown function (D...		Lus10036581 [exp]	16.4	0.8300
AT3G02460			Ypt/Rab-GAP domain of gyp1p su...		Lus10034099 [exp]	21.4	0.7724
AT2G36290			alpha/beta-Hydrolases superfam...		Lus10008968 [exp]	21.9	0.8696
AT3G52500			Eukaryotic aspartyl protease f...		Lus10029408 [exp]	23.1	0.7574
AT1G11910		ATAPA1, APA1	aspartic proteinase A1 (.1)		Lus10020024 [exp]	24.6	0.8506

Compare expression of checked genes

Lus10043119 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.