Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032584 [exp] 234 / 2e-78 AT2G04480 50 / 2e-07 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G367100 [exp] 42 / 9e-05 AT5G55650 / unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10043163 pacid=23168215 polypeptide=Lus10043163 locus=Lus10043163.g ID=Lus10043163.BGIv1.0 annot-version=v1.0 ATGGATAAACCAGCTTGGGTTGAAGGATGTTACTTTTCCCTTATTTGCTTTCTCAAACAGTATTCACCACCATTGTTTTCAGTTGCAGTGCCTTCTTCTC TGGCTATGACTCTGTTTCTCTGGTTTGGATTCTCTCATTTCATTGTGTCATCTTCCCTTGTCCTTTTCTCCACCGTCTTCATTGTACATTTCTCAAATAG GAAACTTGTCAAAGAGAAAGAAGAAGAAACTGTTGTTGAGAAGCAGATTCAAGAGTTGGAAACTGTGGATGAGTATGAAGTGGAGTCGACGGAGTTCTCA TTAGATGGTGAGAGCAGTGATGATTCTCCAAGGAATGAGGGTTTCCAACTCAACTGGAAGATGCCCTTCAACAATGTCATCGGCCAAAGTTTACCAATCT GTGAAAGTGAAGAAGAAGATGATGATGGTGATCATCTCATCGAGATAAGTCTTCCACCAATTAATGAAAGCAACGCTGTCTATGGCACTTCGTCGAAGCG AATGTTGTCTCCTCAGTTCGACATCTTCAGTGAAGAAGAAGAAGAAGAAGGGATGATGGAGCTGATGGAAGAGATGGATGAGTGA
AA sequence Show only first row Show all	>Lus10043163 pacid=23168215 polypeptide=Lus10043163 locus=Lus10043163.g ID=Lus10043163.BGIv1.0 annot-version=v1.0 MDKPAWVEGCYFSLICFLKQYSPPLFSVAVPSSLAMTLFLWFGFSHFIVSSSLVLFSTVFIVHFSNRKLVKEKEEETVVEKQIQELETVDEYEVESTEFS LDGESSDDSPRNEGFQLNWKMPFNNVIGQSLPICESEEEDDDGDHLIEISLPPINESNAVYGTSSKRMLSPQFDIFSEEEEEEGMMELMEEMDE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10043163 [exp]	0	1
AT2G37210		LOG3	LONELY GUY 3, lysine decarboxy...		Lus10002226 [exp]	3.5	0.7746
AT3G52770		ZPR3	LITTLE ZIPPER 3, protein bindi...		Lus10017055 [exp]	5.5	0.7750
AT5G55990		ATCBL2, CBL2	calcineurin B-like protein 2 (...		Lus10039098 [exp]	5.5	0.7884
AT3G06145			unknown protein		Lus10034029 [exp]	5.7	0.8029
AT3G06145			unknown protein		Lus10004420 [exp]	14.4	0.7644
AT2G04480			unknown protein		Lus10032584 [exp]	16.2	0.8096
AT1G10200	LIM	WLIM1, SF3	WLIM1, GATA type zinc finger t...		Lus10004230 [exp]	18.3	0.7353
AT5G02010		ATROPGEF7, ROPG...	RHO guanyl-nucleotide exchange...		Lus10021500 [exp]	29.2	0.7636
AT3G48750		CDKA1, CDC2A, C...	cell division control 2 (.1)		Lus10038754 [exp]	29.7	0.7666
AT2G05320			beta-1,2-N-acetylglucosaminylt...		Lus10001174 [exp]	51.0	0.7521

Compare expression of checked genes

Lus10043163 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.