Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G55230 843 / 0 ATMAP65-1 microtubule-associated proteins 65-1 (.1.2) AT4G26760 813 / 0 MAP65-2 microtubule-associated protein 65-2 (.1) AT1G14690 457 / 2e-153 MAP65-7 microtubule-associated protein 65-7 (.1.2) AT2G01910 448 / 1e-149 ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) AT1G27920 432 / 8e-144 MAP65-8 microtubule-associated protein 65-8 (.1) AT5G51600 435 / 5e-143 ATMAP65-3, PLE PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) AT2G38720 417 / 6e-138 MAP65-5 microtubule-associated protein 65-5 (.1) AT5G62250 372 / 1e-120 MAP65-9 microtubule-associated protein 65-9 (.1) AT3G60840 372 / 2e-119 MAP65-4 microtubule-associated protein 65-4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032567 [exp] 1127 / 0 AT5G55230 850 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10008705 [exp] 499 / 5e-170 AT2G38720 565 / 0.0 microtubule-associated protein 65-5 (.1) Lus10026114 [exp] 491 / 2e-166 AT2G38720 553 / 0.0 microtubule-associated protein 65-5 (.1) Lus10031939 [exp] 468 / 5e-157 AT2G01910 838 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10015684 [exp] 468 / 3e-155 AT5G51600 759 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10041635 [exp] 458 / 4e-154 AT2G38720 550 / 0.0 microtubule-associated protein 65-5 (.1) Lus10035099 [exp] 459 / 1e-153 AT2G01910 822 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10037691 [exp] 461 / 7e-153 AT5G51600 768 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10015789 [exp] 454 / 7e-152 AT1G27920 673 / 0.0 microtubule-associated protein 65-8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G356500 [exp] 888 / 0 AT5G55230 853 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.011G092500 [exp] 872 / 0 AT5G55230 863 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.003G192400 [exp] 523 / 2e-179 AT2G38720 555 / 0.0 microtubule-associated protein 65-5 (.1) Potri.003G173300 [exp] 479 / 6e-162 AT1G27920 655 / 0.0 microtubule-associated protein 65-8 (.1) Potri.015G131400 [exp] 470 / 1e-156 AT5G51600 728 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.008G139700 [exp] 466 / 2e-156 AT2G01910 778 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Potri.001G055100 [exp] 458 / 3e-153 AT1G27920 623 / 0.0 microtubule-associated protein 65-8 (.1) Potri.012G129600 [exp] 451 / 3e-149 AT5G51600 761 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.014G070100 [exp] 411 / 8e-134 AT5G51600 451 / 5e-149 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.006G269800 [exp] 157 / 3e-45 AT5G51600 186 / 2e-56 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03999 [flax] [poplar] MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
Representative CDS sequence Show only first row Show all	>Lus10043178 pacid=23168059 polypeptide=Lus10043178 locus=Lus10043178.g ID=Lus10043178.BGIv1.0 annot-version=v1.0 ATGCCTTCTCGATCTCAGTCTGTTTCACTCGCTGCTTCACCTCATACAACTCCTCTTGAAATGTGGTCTATTCATGTAGAAGCCGTTGTTGACTGGGGAG AGAAAATGGGGTGGAAGAGGAACGGTTCGGCTAGTCAAAGCAAGTTAGACAGTGCCACGCTGGTAAATAAGCTGCTAAAATCGGGGTATTTTCCAGTGCA GCTTCCTACCAGTGCACTCCTTCCCTCTGACCTCTGCTGCTTCACGAACGTTGAGACTGTAGGAAAGAGAAAAAAAGCACAGTGTGAGCTTGCTTTTCTC TTACCATTTTCAGATCTGAAGCTTCACAGCACTTCACTACTCGTCTCCTCCCCAAAACCCTCAAGAACCATCTGGGTTTCTGGACTTGTAAGTTTGATGG CACTCACAGACACTCAGAACCCTCTAGTTACACAAGTGACCTGCGGTACTTTGCTGCAGAAGCTTCAGGAAATTTGGGATGAAGTTGGTGAAAATGATGA GGAGAGGGATAAGATGCTTCTTCAAATAGAGCAAGAGTGCTTAGATGTTTACAAAAGGAAGGTTGAGCTGGCAGCACATTCAAGGGCAGAGCTTCTGCAA ACTCTTTCGGACGCCACCATAGAGCTTTCCACCCTCCTATCTTCTCTAGGAGATAAAACTTCGGTTGGAATTCCTGAAAAGACTTCTGGAACGATCAAGG AGCAACTTGAAGCCATAGCACCAGCGCTGGAGCAGTTGTGGAAACAGAAAGAAGAGAGAGTAAATGAATTCTCAGATGTGCTTTCACAGATACAAAAGAT TTGTGGAGAAATTGCCGGTAGTGTAAACTCTGATGGGGCTCCTGTAGTTGATGAATCTGATCTATCCTTGAAGAGGTTGGATGAATATCATGCTCATCTA CAAGAACTTCAGAAGGAGAAGAGTGAGAGATTGCACAAGGTCCTTGAATTTGTGAGCAGTGTGCATGATCTCTGTGCTGTCCTGGGTTTGGACTTCTTTA GCACTGTTACTGAAGTTCATCCCAGCTTGAACGAGTCTACTAATGTTCAATCCAAAAGTATTAGCAACGATACATTGGCAAGGTTGGCTAAGACAGTTCT GGAGTTAAAGAGCGATAAGAAACAGAGGCTCCATAAACTCCAAGAATTAGCAACTCAGCTCACTGATCTGTGGAACCTGATGGATACCCCTGCGGAAGAA AGGAAACTATTTGACCATGTTACATGCAACATTTCAGCTACAGTTGATGAAGTGACTGTGCCTGGTTCTCTTGCACTGGATCTCATTGAACAGGCTGAAG TTGAAGTAGAGAGGCTTGATCTGCTAAAGTTCAGTAGGATGAAGGAAATCGCCTTCAAGAAGCAATCAGAACTTGAAGAGATCTTTACTCGGGCGCATAT CGAGATTGATCCCGAGGCTGCTCGCGAAAGAATTATGGCACTGATCAATTCTGGGAATATTGAGCCCACTGAGTTACTAGCTGACATGGATAGTCAAACA TCAAAGGCCAAAGAAGAAGCTCTTAGCAGGAAGGAAATTTTGGACAAGGTGGAGAAATGGATGTCTGCATGTGAAGAAGAAAGCTGGCTTGAAGACTATA ATCGGGATGATAACAGGTATAATGCAAGCCGAGGTGCACACTTGAATCTCAAGCGAGCAGAGAAAGCCCGAATTCTAGTAAACAAAATTCCAGCTCTGGT GGACTCCTTGGTTGCTAAAACTCGGGCATGGGAAGAGGAACGTGAGCTTCAGTTCACTTACGATGGTGTTCCTCTTCTTGCTATGCTCGATGAATATGCC ATGCTTAGGCAAGAACGAGAAGAGGAGAAGCGTAGGATGAAAGTAAAAGGTGCATTTGGGTCGAGGGCAAGCCCTGCTCGGCCAGTGAGTGCGAAGAAGG TGGCAGGACCTCGAACAAACAGTGCCAATGGTGGAACTCCAAGCAGGCGGCTGTCAATGAACACTACTCAGAATGGGGGCAGCAGATCGGGAGCAAGTAA AGACAGAAGGGAGGCGAGGATGTCTGCTCCTCCGAGTAACCACCATGTCACAGTGTCGAAGGAAGTTGATGATGTGTCTCATGCTTCCGGTACTGAGCCG ATTCCAGCTTCACCGTAG
AA sequence Show only first row Show all	>Lus10043178 pacid=23168059 polypeptide=Lus10043178 locus=Lus10043178.g ID=Lus10043178.BGIv1.0 annot-version=v1.0 MPSRSQSVSLAASPHTTPLEMWSIHVEAVVDWGEKMGWKRNGSASQSKLDSATLVNKLLKSGYFPVQLPTSALLPSDLCCFTNVETVGKRKKAQCELAFL LPFSDLKLHSTSLLVSSPKPSRTIWVSGLVSLMALTDTQNPLVTQVTCGTLLQKLQEIWDEVGENDEERDKMLLQIEQECLDVYKRKVELAAHSRAELLQ TLSDATIELSTLLSSLGDKTSVGIPEKTSGTIKEQLEAIAPALEQLWKQKEERVNEFSDVLSQIQKICGEIAGSVNSDGAPVVDESDLSLKRLDEYHAHL QELQKEKSERLHKVLEFVSSVHDLCAVLGLDFFSTVTEVHPSLNESTNVQSKSISNDTLARLAKTVLELKSDKKQRLHKLQELATQLTDLWNLMDTPAEE RKLFDHVTCNISATVDEVTVPGSLALDLIEQAEVEVERLDLLKFSRMKEIAFKKQSELEEIFTRAHIEIDPEAARERIMALINSGNIEPTELLADMDSQT SKAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDSLVAKTRAWEEERELQFTYDGVPLLAMLDEYA MLRQEREEEKRRMKVKGAFGSRASPARPVSAKKVAGPRTNSANGGTPSRRLSMNTTQNGGSRSGASKDRREARMSAPPSNHHVTVSKEVDDVSHASGTEP IPASP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G55230		ATMAP65-1	microtubule-associated protein...		Lus10043178 [exp]	0	1
AT3G13560			O-Glycosyl hydrolases family 1...		Lus10013758 [exp]	2.0	0.9225
AT1G77270			unknown protein		Lus10038311 [exp]	3.0	0.9203
AT5G57590		BIO1	biotin auxotroph 1, adenosylme...		Lus10003630 [exp]	4.1	0.9234
AT5G11590	AP2_ERF	DREB3, TINY2	TINY2, Integrase-type DNA-bind...		Lus10038270 [exp]	7.0	0.8698
AT2G34780		EMB1611, MEE22	EMBRYO DEFECTIVE 1611, materna...		Lus10038447 [exp]	8.5	0.8976
AT4G28200			unknown protein		Lus10003351 [exp]	9.6	0.9153
AT5G58480			O-Glycosyl hydrolases family 1...		Lus10042269 [exp]	11.0	0.9086
AT5G61370			Pentatricopeptide repeat (PPR)...		Lus10000564 [exp]	12.7	0.8592
AT3G10140		RECA3	RECA homolog 3 (.1)		Lus10018037 [exp]	13.5	0.8974
AT1G17820			Putative integral membrane pro...		Lus10036188 [exp]	13.9	0.8647

Compare expression of checked genes

Lus10043178 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.