Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G67280 549 / 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) AT1G11840 452 / 2e-160 ATGLX1 glyoxalase I homolog (.1.2.3.4.5.6) AT1G08110 74 / 2e-15 lactoylglutathione lyase family protein / glyoxalase I family protein (.1.2.3.4)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011115 [exp] 706 / 0 AT1G67280 543 / 0.0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) Lus10038612 [exp] 454 / 2e-160 AT1G67280 455 / 4e-161 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) Lus10003523 [exp] 451 / 2e-156 AT1G11840 495 / 5e-174 glyoxalase I homolog (.1.2.3.4.5.6) Lus10002943 [exp] 404 / 4e-142 AT1G11840 447 / 5e-160 glyoxalase I homolog (.1.2.3.4.5.6) Lus10000007 [exp] 126 / 7e-36 AT1G11840 131 / 1e-39 glyoxalase I homolog (.1.2.3.4.5.6) Lus10021429 [exp] 77 / 1e-16 AT1G08110 297 / 3e-104 lactoylglutathione lyase family protein / glyoxalase I family protein (.1.2.3.4) Lus10016138 [exp] 78 / 3e-16 AT1G08110 302 / 2e-104 lactoylglutathione lyase family protein / glyoxalase I family protein (.1.2.3.4)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G084800 [exp] 587 / 0 AT1G67280 553 / 0.0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) Potri.006G160600 [exp] 574 / 0 AT1G67280 571 / 0.0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) Potri.018G042100 [exp] 505 / 0 AT1G67280 488 / 3e-174 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2) Potri.004G013200 [exp] 448 / 3e-159 AT1G11840 496 / 8e-179 glyoxalase I homolog (.1.2.3.4.5.6) Potri.009G007200 [exp] 80 / 3e-17 AT1G08110 318 / 6e-111 lactoylglutathione lyase family protein / glyoxalase I family protein (.1.2.3.4) Potri.006G239802 [exp] 92 / 5e-12 AT1G67280 90 / 7e-13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0104 [flax] [poplar] Glyoxalase PF00903 [flax] [poplar] Glyoxalase Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Representative CDS sequence Show only first row Show all	>Lus10043235 pacid=23167970 polypeptide=Lus10043235 locus=Lus10043235.g ID=Lus10043235.BGIv1.0 annot-version=v1.0 ATGGCGTCCTCAATCCGTCCGTCTCTCTCGTCCTCTTTCAGGCTCTGTAACAATACCGCCACTTCTCGCGCTGCCGTCGCTTCTCTCACTTCCTTCACTT CTCCTCCTTCCCACCGATTGCCTTTCCTCTCCATCGCTGTTCGACATTCAGAGCTACTTGGGTTCAAACCATCTAAACCATGTGGACAAGAGAGTACCAG CTTCAGAGTTTGTGCAGCTGGGAATATGGCGCAAGCAAGCACTACAGCTGCCCAGGAAAATATACTTGAGTGGGTCAAACAAGACAACAGAAGAATGCTA CATGTTGTTTATCGTGTTGGGGATTTGGACAGGACCATAAAATTCTACACAGAGTGCTTGGGTATGAAGCTGCTAAGGAAACGGGACATACCAGAGGAGA GGTACACAAATGCCTTTCTTGGATATGGACCAGAAGATTCAAACTTTGTCATAGAGATTACATATAATTATGGTGTTGACACGTATGACATTGGGAGTGG ATTTGGACATTTTGGCATTGCAGTAGAGGATGTTTCCAAGACTGTTGAACTTGTAAAGGCCAAGGGAGGCAAAATAACTAGGGAACCTGGTCCTGTTAAA GGTGGCAGTACTGTGATTGCGTTTATTGAAGACCCTGATGGCTATAAGTTTGAACTTCTTGAAAGAGGGCCTACTCCGGAGCCTCTTTGTCAGGTGATGC TTCGTGTTGGTGATCTTGATCGGGCAATAAAGTTCTATGAGAAGGCTTTTGGCATGGAGCTTCTCCGCAAACGTGATAATTCAGAATACAAGTATACTAT TGCAATGATGGGTTATGGACCTGAAGATAAAAATGCTGTACTAGAGTTAACGTACAATTATGGAGTCACCGAGTATGAGAAGGGAAATGCTTATGCTCAG ATTGCAATAGGCACAGATGATGTTTACAAAACGGCAGAAGCTGTCAAACTTTTTGGTGGGAAGATAACTCGGGAACCAGGGCCATTGCCGGGTATCAATA CCAAGATCACTGCATGCTTGGATCCAGATGGTTGGAAGACGGTATTCGTGGATAATATTGATTTCCTCAAGGAATTGGAGTGA
AA sequence Show only first row Show all	>Lus10043235 pacid=23167970 polypeptide=Lus10043235 locus=Lus10043235.g ID=Lus10043235.BGIv1.0 annot-version=v1.0 MASSIRPSLSSSFRLCNNTATSRAAVASLTSFTSPPSHRLPFLSIAVRHSELLGFKPSKPCGQESTSFRVCAAGNMAQASTTAAQENILEWVKQDNRRML HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSNFVIEITYNYGVDTYDIGSGFGHFGIAVEDVSKTVELVKAKGGKITREPGPVK GGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRKRDNSEYKYTIAMMGYGPEDKNAVLELTYNYGVTEYEKGNAYAQ IAIGTDDVYKTAEAVKLFGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G67280			Glyoxalase/Bleomycin resistanc...		Lus10043235 [exp]	0	1
AT1G67280			Glyoxalase/Bleomycin resistanc...		Lus10011115 [exp]	1.0	0.9598
AT1G70100			unknown protein		Lus10010725 [exp]	2.4	0.8580
AT1G69740		HEMB1	Aldolase superfamily protein (...		Lus10042716 [exp]	2.8	0.8710
AT5G27560			Domain of unknown function (DU...		Lus10029929 [exp]	2.8	0.8893
AT5G58560		FOLK	farnesol kinase, Phosphatidate...		Lus10031858 [exp]	5.1	0.8482
AT5G57960			GTP-binding protein, HflX (.1)		Lus10024287 [exp]	5.2	0.8816
AT1G68830		STN7	STT7 homolog STN7 (.1)		Lus10034273 [exp]	6.7	0.8675
AT3G56010			unknown protein		Lus10040939 [exp]	7.5	0.8577
AT4G17740			Peptidase S41 family protein (...		Lus10004402 [exp]	8.1	0.8518
AT5G61040			unknown protein		Lus10021155 [exp]	11.8	0.8540

Compare expression of checked genes

Lus10043235 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.