Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G18010 603 / 0 Major facilitator superfamily protein (.1) AT1G18000 603 / 0 Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019528 [exp] 842 / 0 AT1G18010 659 / 0.0 Major facilitator superfamily protein (.1) Lus10006288 [exp] 714 / 0 AT1G18010 649 / 0.0 Major facilitator superfamily protein (.1) Lus10020560 [exp] 648 / 0 AT1G18010 573 / 0.0 Major facilitator superfamily protein (.1) Lus10019527 [exp] 583 / 0 AT1G18010 578 / 0.0 Major facilitator superfamily protein (.1) Lus10009416 [exp] 432 / 9e-151 AT1G18010 405 / 1e-140 Major facilitator superfamily protein (.1) Lus10009415 [exp] 98 / 3e-24 AT1G18010 108 / 1e-28 Major facilitator superfamily protein (.1) Lus10043370 [exp] 98 / 9e-24 AT1G18010 103 / 3e-26 Major facilitator superfamily protein (.1) Lus10009413 [exp] 0 / 1 AT1G18010 152 / 2e-47 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G005100 [exp] 674 / 0 AT1G18010 630 / 0.0 Major facilitator superfamily protein (.1) Potri.012G011000 [exp] 480 / 1e-168 AT1G18010 422 / 5e-146 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10043371 pacid=23167999 polypeptide=Lus10043371 locus=Lus10043371.g ID=Lus10043371.BGIv1.0 annot-version=v1.0 ATGGGATTCCACGGCGATCAAGAATCCGACAACACCGCCACCACGGTGCCAATAAACTCCAGTCTAAGGTACGATTCGCCGTTCGTACAAGTTGTCCTCA TCGGGTTGGTGTGTTTCTGCTGCCCGGGGATGTTCAACGCCCTCTCCGGAATGGGCGGAGGTGGCCAGGTGGACCCCACTGCAGCCAACAACGCCAACAC CGCCCTCTACACCACCTTCGCCGTCTTCGGAGTCCTCGGCGGCGGCTTCTACAACATCCTCGGCCCTCGACTCACCCTCGCCGCCGGCTGCAGCACCTAC GTCCTCTACGCCGGCTCTTTCCTCTACTACAACCACCACAAGCACCAGGCTTTCGCGGTTGCCGCCGGAGCAATCCTCGGAATCGGAGCCGGGTTCGTCT GGGCGGGGCAGGGGGCAATCATGACGTCTTATCCTCCACCCAATCGGAAAGGGATGTACATATCCCTCTTCTGGAGCATATTCAACACGGGAGGAGTCAT CGGCGGCCTCATCCCTTTCGCGTTGAATTACCACCGACAAGCCCCTTCCGTCAGCGACGGCACATACATCGGATTCATGGCCTTTATGGCGGTGGGGACT CTCCTCTCCTTCGCAATCCTCCCGCCGAGTAAAGTAATCCGCGAAGACGGAACCCGATGCACGAAGATCAAATATTCAAAAGTCTCGACGGAAGGAATCG AGATCTTGAAGCTGTTCGGGAACTGGAAGATGCTTTTAATCGCTCCGGCAGCATGGGCGTCGAATTTCTTCTACACGTACCAATTCAACAACGTCAACGC CGCGAAATTCAACGTCCGGACACGAGGGTTGAACAACGTGTTCTACTGGGGAGCGCAGATGGTGGGGTCTTTCGGGATCGGGTACGTTTTGGATTTCAGC TTCGAGAGCAGGAAGAAGAGAGGGTTTCTAGGGATTGCGATTGTGGGTGTGTTGGGAACCGTGATTTGGGCCGGCGGGTTGGCCGACCAGTTGGGTTACT CGTTCGAAAACATGCCGGAGAAGTTGGATTTTAAGGAATCCGGTGGGAAGTTTGCGGGGCCGTTTGTGCTCTACTTTAGCTATGGATTTCTGGATGCGAT TTTCCAGAGCACAGTGTATTGGGTGATTGGGGGGTTGGCGAATGACTCGGAGGTTTTGAGCAGGTACGTTGGGTTTTACAAAGGGGTGCAGAGTGCCGGA GCTGCGATTTCTTGGCAACTTGATACTAAGAAAGTTCCGATGCTGACGCAGCTGATTGTGAATTGGGTGCTTACCACGGTGAGTTACCCGTTGCTGATAG TTTTGGTGGCGTTGGCTGTTAGCGATGAAGGAGAGTCGGAAGGTGAAAATGGAGAAAAAACCATGGATGACAGCGCTCAGAATTATGGAGATAACAAGCC CATATAA
AA sequence Show only first row Show all	>Lus10043371 pacid=23167999 polypeptide=Lus10043371 locus=Lus10043371.g ID=Lus10043371.BGIv1.0 annot-version=v1.0 MGFHGDQESDNTATTVPINSSLRYDSPFVQVVLIGLVCFCCPGMFNALSGMGGGGQVDPTAANNANTALYTTFAVFGVLGGGFYNILGPRLTLAAGCSTY VLYAGSFLYYNHHKHQAFAVAAGAILGIGAGFVWAGQGAIMTSYPPPNRKGMYISLFWSIFNTGGVIGGLIPFALNYHRQAPSVSDGTYIGFMAFMAVGT LLSFAILPPSKVIREDGTRCTKIKYSKVSTEGIEILKLFGNWKMLLIAPAAWASNFFYTYQFNNVNAAKFNVRTRGLNNVFYWGAQMVGSFGIGYVLDFS FESRKKRGFLGIAIVGVLGTVIWAGGLADQLGYSFENMPEKLDFKESGGKFAGPFVLYFSYGFLDAIFQSTVYWVIGGLANDSEVLSRYVGFYKGVQSAG AAISWQLDTKKVPMLTQLIVNWVLTTVSYPLLIVLVALAVSDEGESEGENGEKTMDDSAQNYGDNKPI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G18010			Major facilitator superfamily ...		Lus10043371 [exp]	0	1
AT5G50240		PIMT2, AtPIMT2	Arabidopsis thaliana protein-l...		Lus10017776 [exp]	2.8	0.8616
AT3G20410		CPK9	calmodulin-domain protein kina...		Lus10032640 [exp]	5.2	0.8668
AT2G44730	Trihelix		Alcohol dehydrogenase transcri...		Lus10000963 [exp]	6.0	0.8541
					Lus10041943 [exp]	7.5	0.8661
AT3G01470	HD	HD-ZIP-1, HAT5,...	HOMEODOMAIN PROTEIN FROM ARABI...		Lus10036674 [exp]	7.7	0.8667
AT1G67540			unknown protein		Lus10037003 [exp]	7.9	0.8557
AT1G07710			Ankyrin repeat family protein ...		Lus10025289 [exp]	10.2	0.8552
AT4G19840		AtPP2A-1, ATPP2...	phloem protein 2-A1 (.1)		Lus10040602 [exp]	11.0	0.8053
					Lus10018215 [exp]	11.2	0.8590
AT4G05400			copper ion binding (.1.2)		Lus10035454 [exp]	13.8	0.7924

Compare expression of checked genes

Lus10043371 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.