Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G34630 372 / 2e-127 unknown protein AT5G51150 80 / 5e-16 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034188 [exp] 510 / 4e-180 AT1G34630 681 / 0.0 unknown protein Lus10043005 [exp] 70 / 8e-13 AT5G51150 780 / 0.0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (.1) Lus10032508 [exp] 64 / 7e-11 AT5G51150 775 / 0.0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G096500 [exp] 405 / 3e-139 AT1G34630 667 / 0.0 unknown protein Potri.015G111200 [exp] 82 / 8e-17 AT5G51150 767 / 0.0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (.1) Potri.012G113700 [exp] 81 / 3e-16 AT5G51150 744 / 0.0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (.1) Potri.005G165100 [exp] 69 / 8e-15 AT1G34630 92 / 1e-23 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10043395 pacid=23167966 polypeptide=Lus10043395 locus=Lus10043395.g ID=Lus10043395.BGIv1.0 annot-version=v1.0 ATGTCGCCCTTCTGCGACGCCGTCGTTCACGGCGGCGACGCCGATGATGGCACAAACCTCTGTCTTGACCCTGACTGCTCCCATTGCGCCAGATCGGATC CTGCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTATTCTTTGTTTGCTAAGTTAGATTCACTAGTGGAATTGAACGATTCTGATAAGCTTCGGAGAATTAT TATTGCCTCCGTCAAAGGCTTCTCCATTGGGGCCGGACTCAAAGGTGGTTTAGCTCTTTTCTCCATTCTCGCTCGCCTCCGCCGCACCAGAAAACCTCGG GATTTCACTGATAGTGAAGCCATCACTTTAGCGCTCAAGGAGACTCTCAGATACGGATTGTTCCTCGGAACTTTCGCCGGCACGTTTGTGTCCGTCGACG AGATTATTGCAGCTTTCGGTGGTCACCGTAGGCAGACTGGGAAATGGAGAGCTTTATTAGCAGGTCTGGTTGCCGGGCCTTCAATGCTTCTTACCGGTCC CAATACTCAGCATACTAGCTTGGCTATCTACATACTGATGCGTGCTGCTGTTTTGGCTTCCCGCTGTGGGATTAAGAGCAAACGCTTTGGCAAATACTGC AAGCCTCTCACTTGGAAGCACGGCGATCTTTTTCTAATGTGTCTCTCCTCTTCACAAATCTTGTCAGCATACATATTGAAACAAGAAAGTCTGCCGCCAT CATACAAATCCTTTCTTAACAAGCACGGTGGAAAGGATCTATCTATCCTACAAGGTGTCAAAGATATTGCCAGTGGCCTGCCTTTCACCAATTTGGATGT GATAGAGAACTATTACAACTCTATAGGAGTAGACATCAAGTTGGATCCCCAAATGAAAATCCCCTGCACCTTTCCGACGGGTCTGGCACTGGCAATAGAA AAGAAAAGCAGGAGGATAGAGATATCACTCTACTGCCTGGCAAGGGCAATAGAGAGCTTCTTCACATGCATGGGGGAAGTTGGGTATTTGCCACAATTCA CAAAAGTGAATAGAGCAGATGTGGTAGTTTTCAGCATTTCAACTGCTATAATCATGCATTGTTACGCGCAGGAGCGAGAAGTGTTCCGGTCCAAGTACCT TAATGTACTTGACTGGGTGTTTGGAGTCCCTCCTCCGCCCGATGAAAGCCCTCGCTACTGCAAACCCAAATGA
AA sequence Show only first row Show all	>Lus10043395 pacid=23167966 polypeptide=Lus10043395 locus=Lus10043395.g ID=Lus10043395.BGIv1.0 annot-version=v1.0 MSPFCDAVVHGGDADDGTNLCLDPDCSHCARSDPASSSSSSSSSYSLFAKLDSLVELNDSDKLRRIIIASVKGFSIGAGLKGGLALFSILARLRRTRKPR DFTDSEAITLALKETLRYGLFLGTFAGTFVSVDEIIAAFGGHRRQTGKWRALLAGLVAGPSMLLTGPNTQHTSLAIYILMRAAVLASRCGIKSKRFGKYC KPLTWKHGDLFLMCLSSSQILSAYILKQESLPPSYKSFLNKHGGKDLSILQGVKDIASGLPFTNLDVIENYYNSIGVDIKLDPQMKIPCTFPTGLALAIE KKSRRIEISLYCLARAIESFFTCMGEVGYLPQFTKVNRADVVVFSISTAIIMHCYAQEREVFRSKYLNVLDWVFGVPPPPDESPRYCKPK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G34630			unknown protein		Lus10043395 [exp]	0	1
AT5G03795			Exostosin family protein (.1)		Lus10013790 [exp]	1.0	0.8721
AT2G23910			NAD(P)-binding Rossmann-fold s...		Lus10009549 [exp]	3.0	0.7418
AT5G13825			unknown protein		Lus10001690 [exp]	8.2	0.8075
AT1G04110		SDD1	STOMATAL DENSITY AND DISTRIBUT...		Lus10002995 [exp]	9.3	0.7712
AT5G04530		KCS19	3-ketoacyl-CoA synthase 19 (.1...		Lus10039906 [exp]	11.2	0.7536
AT5G23960		ATTPS21	terpene synthase 21 (.1.2)		Lus10031589 [exp]	11.7	0.6936
AT5G05320			FAD/NAD(P)-binding oxidoreduct...		Lus10019719 [exp]	12.3	0.7665
AT1G76140			Prolyl oligopeptidase family p...		Lus10019994 [exp]	17.0	0.7616
					Lus10028050 [exp]	19.0	0.7572
AT4G28610	GARP	ATPHR1, PHR1	phosphate starvation response ...		Lus10024938 [exp]	23.5	0.6315

Compare expression of checked genes

Lus10043395 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.