Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10043450 pacid=23168394 polypeptide=Lus10043450 locus=Lus10043450.g ID=Lus10043450.BGIv1.0 annot-version=v1.0 ATGTCCATCGTCAACCAATCTAGTTCCCGACGACGAAGAACCGGCGGTACTGGATTCATCGTCAAACTCTGCTACACAATCGACATTCTGCTCTCCATGG ATCTTCCGCCGTTTCGGCTGATTCTGGTTCTCGTCGCTCTCTGTCTCTTCCTGCTCCCTGCCCCCGCCTGCCGCTACTTCTCCTCCACACCCACGGCTGA TCATAATAGCGGACATTCAAGTGCCGTGGTGGGGTTCGTGAATGGCGGTTGGTTACTTCCGGCTACTCCACTTACCCTGATTTTCTTGCTCCAGTGGTTT TACACGGCGTCTAATTGGACCGCCTGCATGCCTAGAAGAACATTGGTGCCGTACTGGATAGCGTCAGAGGGGATTTCGCCCTGGGTTGTTACGGTGATGG TTGTTCAATTGGTGCTCATGGTTCGGTACCGGCCTTCCTTTCAGGACCATTCTCTGCTTAAGCTTTGA
AA sequence Show only first row Show all	>Lus10043450 pacid=23168394 polypeptide=Lus10043450 locus=Lus10043450.g ID=Lus10043450.BGIv1.0 annot-version=v1.0 MSIVNQSSSRRRRTGGTGFIVKLCYTIDILLSMDLPPFRLILVLVALCLFLLPAPACRYFSSTPTADHNSGHSSAVVGFVNGGWLLPATPLTLIFLLQWF YTASNWTACMPRRTLVPYWIASEGISPWVVTVMVVQLVLMVRYRPSFQDHSLLKL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10043450 [exp]	0	1
AT4G15440		CYP74B2, HPL1	hydroperoxide lyase 1 (.1)		Lus10030032 [exp]	8.7	0.7199
AT5G23960		ATTPS21	terpene synthase 21 (.1.2)		Lus10014724 [exp]	8.7	0.7129
AT5G08370		ATAGAL2	alpha-galactosidase 2 (.1.2)		Lus10018258 [exp]	19.3	0.6486
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10021392 [exp]	30.5	0.6741
AT1G49960			Xanthine/uracil permease famil...		Lus10006134 [exp]	34.1	0.6716
AT3G30210	MYB	ATMYB121	myb domain protein 121 (.1)		Lus10005079 [exp]	37.9	0.6561
AT5G03050			unknown protein		Lus10030557 [exp]	48.1	0.5960
AT3G28470	MYB	TDF1, ATMYB35	DEFECTIVE IN MERISTEM DEVELOPM...		Lus10033119 [exp]	59.4	0.6133
AT5G19790	AP2_ERF	RAP2.11	related to AP2 11 (.1)		Lus10036793 [exp]	59.9	0.6446
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10021391 [exp]	60.3	0.6403

Compare expression of checked genes

Lus10043450 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.