Potri.001G011900 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G011900.2 pacid=42788496 polypeptide=Potri.001G011900.2.p locus=Potri.001G011900 ID=Potri.001G011900.2.v4.1 annot-version=v4.1
ATGTCTCGAGCAGAGGACTTATGGGAGAGGTTAGTAAGGGCTGTGTTAAGGAGGGAAAGAACTGGGACTGATGCACTTGGTCGGCCTGTTGGTGGTATTG
CTGGATATGTTCCGTCTTCGCTTACTAATAATAGGGATATAGATGAAATTTTGAGAGCAGCAGATGAAATTCAAGATGGAAATCCAGCTGTGTCTAGAAT
TTTATGTGAACATGCTTATTCACTTGCACAAAATCTGGATCCTAATAGTGAAGGAAGAGGTGTTCTACAATTCAAGACTGGTTTGATGTCTGTTATCAAG
CAAAAGCTGGCAAAAAGGGAGGGTGGAACCATAGATAGAAGCCAGGATATTGCTCAGCTGCAAGAGTTTTACAAATCCTACAGAGAGAACAACAATGTAG
ACAAGCTACGAGAAGAAGAAATGCAGTTGAGGGAATCTGGTGCTTTTACTGGAATCCTTGGCGAGTTGGAGCGGAAGACAGTGAAGAGAAAAAGAGTTTT
TGCAACTCTGAAAGTTTTAGGATCTGTACTTGGGCAACTAACAGATGAACTTCCCGAAGAGCTTAAGCGAATGATCGAATCCGATGCCACCATGACTGAG
GACCTTATTGCTTATAACATCATTCCACTGGATGGTCAAACTATGACAAATGCTATTGTTACTTTCCCTGAGGTACGAGCAGCAGCAACAGCTTTGAAGT
ATTTCCAGGGCCTGCCGCAATTACCAGATGGTTTTCCTATTCCTGCTACAAGAAGTCTTGATATGCTTGATTTTCTGCACTACATTTTTGGGTTTCAGAA
AGACAATGTTTCAAACCAGCGGGAACATGTAGTTCACCTCCTTGCCAATGAACAATCTCGACTTGGTATCCCTGATGCAACCGAACCGAAATTGGATGAG
GCTGCTGTGCAGAAGGTATTCTTGAAGTCACTCGATAATTACATTAAATGGTGCAGCTACCTGTGCATTCAACCAGTGTGGAGCAATTTCGAAGATTTAA
GCAAGGAAAAGAAGTTGCTCTTTGTTTCCCTGTACTTTCTAATATGGGGGGAAGCTGCTAATGTTAGATTTCTTCCAGAATGCCTGTGCTACATATTTCA
TCATATGGTCAGGGAAATGGATGGGATGTTGAGGCAGCAAATTGCTGAGCCAGCAAAAAGCTGTGATTCCAATTCTGAGAATGGCGTATCATTCCTTGAT
CAAGTTATTACTCCTTTGTATGGGGTTATTGCAGCGGAAGCAGGAAACAATGCTAATGGACAAGCGCCTCATTCTTCTTGGAGAAATTACGATGATTTTA
ATGAGTATTTTTGGTCACTTCATTGCTTTGAACTCAGTTGGCCGTGGCGCACGAGTTCATCCTTTTTCCAGAGACCAAAACCAAGGACAAAGTATTTGCT
TAAAACTGCTGGAAGTCAACGTAGAGGGAAAACTTCGTTTGTTGAGCACCGGACGTTCCTTCATCTTTACCATAGTTTCCACCGTCTGTGGATATTTCTT
GTTATGATGTTTCAGGGACTCACTGTCATTGCTTTTAATGATGGAAAATTTAACTCCAAGACACTGCGGGAAATTCTAAGTCTTGGTCCAACATTTGCTG
TGATGAAGTTTATTGAAAGTGTGCTGGATGTTATGATGATGTATGGGGCTTATTCTACATCAAGACGTCTGGCTGTGACTCGAATATTTCTTCGTTTTGT
GTGGTTTTCTTGTGCTTCTGTCTTCTTAAGCTTCCTCTATGTGAAAGCTCTCCAGGAAGAGAGTAAACAAAATTCAAATTCAGTTTTTTTCAGATTGTAC
ATGATCGTTGTAGGCATCTATGCTGGTGTCCAGTTTTTTATTAGTTTCCTCATGCGAATACCAGCTTGCCACCATATGACTAATCAGTGTGATCATTGGC
CATTTATTCGCTTCGTAAAGTGGATGCGCCAGGAACGCTATTATGTTGGGCGTGGCATGTATGAAAGGACTAGTGACTTCATTAAGTACATGCTCTTTTG
GTTGGTTGTTTTGAGCGGAAAGTTCTCATTTGCGTATTTCCTTCAGATCAAGCCCTTGGTGAAACCGACAAGGACTATTGTGAATATGACTGATAATCTG
AAGTATTCTTGGCATGATCTTGTATCTAAAAATAATCATAATTTCTTGACAGTTGTTACCTTATGGGCTCCAGTGATTGCTATTTATCTTTTGGATATCC
ATGTGTTCTATACCATTATATCTGCTATTTGGGGATTCTTGCTTGGAGCAAAAGATCGCCTTGGGGAAATTAGATCTTTGGAAGCTGTTCACAAACTTTT
TGAGGACTTTCCTGGAGCTTTTATGAATAATCTTCATATCCCACTCCCCAACAGAAGTTCCCACAGCTCTTCAAGTCAGGATACCTTGGAGAAGAGAAAA
ATTGATGCTGTTATTTTTGGACCCTTTTGGAATGAGATCATACGCAATTTAAGGGAAGAAGATTATGTCACCAATTTAGAAATGGAGTTGCTTCTGATGC
CTAAAAATTCTGGGAACCTTCCCTTGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATTTTTTTGGCTAAAGATATGGTGGAGGGTAGTGATTCACA
AGCAGAGCTGTGGGAACGGATTTCAAGAGATGACTATATGAAGTATGCCGTTGAGGAGGGCTACCATGCCCTTAGATTTATCTTGACAGAAATATTGGAG
GGTGAAGGAAGGATGTGGGTTGAAAGGGTTTATGCGGACATTGAAGGCAGTATTGCAAACAGGAGTATTCATGTTGACTTTCAGCTGAAGAAACTTTCAC
TTGTAATTACACGAGTTACTGGACTGCTTGGAATTCTGAAAGCTGAAAAACCAGACCAGGAAAATGGTGCCATTAAAGCTGTACAAGATCTGTATGATGT
GGTGCGGCACGATGTCCTTTCTGTCAACATGAGGGAGCACTATGAGACGTGGAATTTGCTGTCAAAAGCAAGGACTGAAGGTCGTTTGTTTACAAACTTG
AAGTGGCCAAGAGATACAGAGCTGAAAACGCAAATCAAGAGATTGTATTTGCTTTTAACAATCAAAGATTCCGCTGCAAATGTCCCCAAAAATATTGAAG
CCAGAAGGAGGCTACAATTCTTTACAAATTCCCTTTTCATGGATCTGCCTGCACCAAAGCCAGTTCGTGAGATGCTATCCTTCAGTGTGTTCACTCCATA
TTATTCTGAGATTGTTCTTTATAGCATGAACGAACTTCAAAAGAAAAATGAGGATGGAATATCGACTTTGTTTTACCTCCAGAAAATATATCCAGATGAG
TGGAAGAACTTTCTTGATCGTATTGGCTGTGATGAGAATGCACCAGACTCAGAGCTCATTAATAATCCTGATGACAACCTTGAACTTCGGATTTGGGCCT
CTTACAGGGGACAAACATTAGCCAGAACTGTCCGTGGGATGATGTACTATAGGAAAGCTCTAATGCTTCAGTCTTATTTGGAAAGAGTGGCGTCTGGAGA
TGCGGAAGCTGCAGTTTCTATTAATGATACAAATGATGCTAAGGGCTTTGACTTGTCCCCGGAAGCACGAGCACTGGCTGATTTAAAGTTTACTTATGTT
GTTACGTGTCAAATATATGGAAAGCAGAAAGAGGACCAAAAACCTGAGGCTGCTGATATTGCATTGCTGATGCAAAGAAATGAAGCTCTTCGTGTTGCTT
TCATTGATGAGGTTGAATCTTTGAAGGATGGTAATGTGCATAGAGAATACTATTCGAAGCTTGTGAAGGCTGATATCAATGGAAAAGACAAGGAAATATA
CTCTGTTAAGTTGCCTGGGAATCCAAAACTTGGAGAAGGAAAACCTGAGAATCAAAACCATGCAATTATATTTACTCGTGGAAATGCAATTCAGACAATT
GATATGAATCAGGATAATTATTTTGAGGAGGCCTTGAAGATGAGAAATCTGCTGGAAGAATTCCATCAAGATCATGGTATTCGTCCTCCAACCATTCTTG
GTGTTAGGGAACATGTATTTACAGGAAGTGTCTCTTCTTTAGCCTCATTTATGTCAAATCAGGAAACTAGCTTTGTAACTCTCGGCCAGCGTGTTCTGGC
TAATCCTTTAAAGGTCCGTATGCATTATGGACATCCAGATGTTTTTGACAGAGTTTTCCACATAACTCGGGGTGGTATTAGCAAGGCCTCTCGTGTTATC
AACATCAGTGAAGATATATATTCAGGGTTCAATTCAACTCTACGCCAAGGAAATGTCACCCATCACGAGTATATTCAGGTTGGCAAAGGACGAGATGTTG
GTCTCAATCAGATAGCTGTATTTGAAGGGAAGGTTTCTGGTGGTAATGGTGAGCAAGTTCTTAGTAGGGATGTCTACAGGCTCGGGCAGCTTTTTGATTT
CTTTCGAATGATGTCATTCTACTTTACCACCGTGGGATACTACTTTTGTACGATGTTGACGGTGCTGACTGTATACGCTTTCCTTTATGGGAAGGCATAT
TTGGCACTATCCGGAGTAGGTGAAGAAGTTGAAATTAGAGCACTGATAACGAAGAACAATGCCCTGAGTGCTGCTCTGAACACTCAATTTCTCTTTCAAA
TTGGTATTTTTACTGCTGTGCCAATGGTTTTGGGCTTCATCTTAGAGCTGGGATTCTTGAGGGCTGTTGTCAATTTCATCACAATGCAGCTTCAGCTCTG
CTCTGTCTTCTTCACATTTTCATTAGGCACAAAATCACATTATTTTGGTAGGACCATTCTTCATGGCGGTGCAAGGTATCAAGCCACTGGTCGTGGATTT
GTGGTCCGCCATATTAGATTTTCTGAAAACTACAGGCTTTACTCCCGCAGCCATTTTGTCAAAGGACTAGAAGTTGTGCTTTTGCTGGTCGTGTACCTTG
CATACGGGTATAATGATGGTGGTGCATTATCTTACATTCTTCTTACAGTCAGCAGTTGGTTTATGGCTCTATCTTGGCTTTTTGCTCCCTATTTGTTCAA
TCCATCTGGATTTGAGTGGCAAAAGACAGTGGAGGACTTCAGTGATTGGACAAATTGGCTTTTTTACAGAGGTGGAATTGGGGTTAAGGGACAAGAAAGT
TGGGAGGCTTGGTGGGATGAAGAATTGGCACATATTCGGACTTTGAGTGGGAGGATAATGGAGACTCTTTTGAGTCTAAGATTCTTTATCTTCCAGTATG
GTGTTGTATACAAGCTTCATATACAAGGAAGTGATACATCATTATCGGTGTATGGCTTCTCATGGATTGTGCTAGCTGTCCTTATAATTCTTTTCAAGGT
GTTCACTTTCAGTCAGAAGGTCTCTGTCAATTTCCAACTTTTGTTGCGCTTTGTACAAGGTGTCTCCTTCATGTTAGCTTTGGCTGGTATAGTTATTGCA
GTTGCGCTTACAGAATTGTCAGTGAGTGACATATTTGCGAGCATCTTAGCATTTATTCCCACTATATGGGGAATTTTATCTATTGCATCTGCTTGGAAAC
CTGTAGTGAAACGGATGGGATTATGGAAATCCATCCGTTCAATTGCCCGCCTATACGATGCTGGGATGGGGATGCTGATCTTCATCCCAATAGCATTCTT
GTCTTGGTTTCCATTCGTTTCAACCTTCCAAACCCGGCTCATGTTCAACCAAGCCTTCAGCCGAGGACTGGAAATTTCTCTCATTCTTGCTGGTAACAAC
CCCAATATTGGGATATGA
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AA sequence
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>Potri.001G011900.2 pacid=42788496 polypeptide=Potri.001G011900.2.p locus=Potri.001G011900 ID=Potri.001G011900.2.v4.1 annot-version=v4.1
MSRAEDLWERLVRAVLRRERTGTDALGRPVGGIAGYVPSSLTNNRDIDEILRAADEIQDGNPAVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIK
QKLAKREGGTIDRSQDIAQLQEFYKSYRENNNVDKLREEEMQLRESGAFTGILGELERKTVKRKRVFATLKVLGSVLGQLTDELPEELKRMIESDATMTE
DLIAYNIIPLDGQTMTNAIVTFPEVRAAATALKYFQGLPQLPDGFPIPATRSLDMLDFLHYIFGFQKDNVSNQREHVVHLLANEQSRLGIPDATEPKLDE
AAVQKVFLKSLDNYIKWCSYLCIQPVWSNFEDLSKEKKLLFVSLYFLIWGEAANVRFLPECLCYIFHHMVREMDGMLRQQIAEPAKSCDSNSENGVSFLD
QVITPLYGVIAAEAGNNANGQAPHSSWRNYDDFNEYFWSLHCFELSWPWRTSSSFFQRPKPRTKYLLKTAGSQRRGKTSFVEHRTFLHLYHSFHRLWIFL
VMMFQGLTVIAFNDGKFNSKTLREILSLGPTFAVMKFIESVLDVMMMYGAYSTSRRLAVTRIFLRFVWFSCASVFLSFLYVKALQEESKQNSNSVFFRLY
MIVVGIYAGVQFFISFLMRIPACHHMTNQCDHWPFIRFVKWMRQERYYVGRGMYERTSDFIKYMLFWLVVLSGKFSFAYFLQIKPLVKPTRTIVNMTDNL
KYSWHDLVSKNNHNFLTVVTLWAPVIAIYLLDIHVFYTIISAIWGFLLGAKDRLGEIRSLEAVHKLFEDFPGAFMNNLHIPLPNRSSHSSSSQDTLEKRK
IDAVIFGPFWNEIIRNLREEDYVTNLEMELLLMPKNSGNLPLVQWPLFLLASKIFLAKDMVEGSDSQAELWERISRDDYMKYAVEEGYHALRFILTEILE
GEGRMWVERVYADIEGSIANRSIHVDFQLKKLSLVITRVTGLLGILKAEKPDQENGAIKAVQDLYDVVRHDVLSVNMREHYETWNLLSKARTEGRLFTNL
KWPRDTELKTQIKRLYLLLTIKDSAANVPKNIEARRRLQFFTNSLFMDLPAPKPVREMLSFSVFTPYYSEIVLYSMNELQKKNEDGISTLFYLQKIYPDE
WKNFLDRIGCDENAPDSELINNPDDNLELRIWASYRGQTLARTVRGMMYYRKALMLQSYLERVASGDAEAAVSINDTNDAKGFDLSPEARALADLKFTYV
VTCQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDEVESLKDGNVHREYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAIQTI
DMNQDNYFEEALKMRNLLEEFHQDHGIRPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVI
NISEDIYSGFNSTLRQGNVTHHEYIQVGKGRDVGLNQIAVFEGKVSGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKAY
LALSGVGEEVEIRALITKNNALSAALNTQFLFQIGIFTAVPMVLGFILELGFLRAVVNFITMQLQLCSVFFTFSLGTKSHYFGRTILHGGARYQATGRGF
VVRHIRFSENYRLYSRSHFVKGLEVVLLLVVYLAYGYNDGGALSYILLTVSSWFMALSWLFAPYLFNPSGFEWQKTVEDFSDWTNWLFYRGGIGVKGQES
WEAWWDEELAHIRTLSGRIMETLLSLRFFIFQYGVVYKLHIQGSDTSLSVYGFSWIVLAVLIILFKVFTFSQKVSVNFQLLLRFVQGVSFMLALAGIVIA
VALTELSVSDIFASILAFIPTIWGILSIASAWKPVVKRMGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNN
PNIGI
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G011900 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.