Pt-CALS1.3 (Potri.001G012200) [POPLAR]

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| Symbol | Pt-CALS1.3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G012200.6 pacid=42791242 polypeptide=Potri.001G012200.6.p locus=Potri.001G012200 ID=Potri.001G012200.6.v4.1 annot-version=v4.1
ATGTCGTCGACGTCGAGAGGAGGAGGAATGGGGATGGATCAGGCGGCTGGGGGGCCGTTAGCGACACCACCGCAGACGCAACGGAGGTTAACGAGGACGC
AGACAGCTGGGAATCTTGGAGAGTCGATATTTGATAGTGAAGTAGTGCCGTCTTCACTTGTTGAGATCGCGCCGATTCTTCGTGTTGCTAATGAAGTTGA
ATCTAGCAATCCTAGAGTTGCTTATCTTTGTCGATTTTATGCCTTTGAGAAAGCGCATAGGTTGGATCCTACTTCTAGTGGAAGAGGTGTTCGTCAATTT
AAAACTGCACTTCTTCAACGTCTCGAAAGGGAGAACGATCCAACCTTGATGGGAAGGGTTAAAAAAAGTGATGCACGAGAAATGCAGAGTTTTTATCAGC
ATTACTACAAAAAATACATCCAAGCATTGCATAATGCTGCTGATAAAGCTGACCGCGCCCAGCTTACCAAGGCATACCAGACTGCTAATGTGCTCTTTGA
GGTTTTAAAGGCTGTTAATACGACACAATCTATTGAAGTTGATCGTGAGATTTTAGAAGCTCAAGATAAAGTTGCAGAAAAAACTCAGATCTATCTGCCT
TACAATATCCTGCCACTTGATCCAGATAGTGCAAATCAAGCGATTATGAGATATCCTGAGATCCAAGCTGCTGTTGTTGCTCTGCGTAACACAAGAGGTC
TTCCGTGGCCCAAGGATTACAAGAAGAAAAACGACGAAGATGTTTTGGATTGGCTTCAGGCAATGTTTGGGTTTCAGAAGGATAATGTGGCAAATCAAAG
AGAGCACTTAATCTTATTACTTGCTAATGTGCACATACGGCAATTTCCCAAGCCTGACCAACAACCAAAGTTGGATGAGCGTGCATTGACTGAAGTGATG
AAGAAACTTTTTAAGAACTACAAAAAATGGTGCAAGTACTTGGATAGAAAAAGTAGCCTTTGGTTACCAACCATACAGCAGGAGGTGCAACAGCGTAAAT
TATTATACATGGGTCTGTATCTTTTGATATGGGGGGAAGCTGCAAACCTGAGATTCATGCCAGAATGCATTTGCTATATTTATCATCATATGGCATTTGA
GTTATATGGCATGCTAGCTGGAAATGTCAGTCCTATGACAGGAGAAAATGTAAAGCCTGCCTATGGAGGTGAAGAAGAGGCTTTCTTGAGTAAAGTTGTT
ACTCCTATCTACAACATGATCGCAAAGGAAGCTGAAAGGAGTAAAAAAGGGAAGTCAAAGCATTCTCAATGGAGGAACTACGACGATTTAAATGAGTACT
TCTGGTCAGTTGATTGTTTCCGCTTAGGCTGGCCCATGCGTGCAGATGCTGATTTCTTTTGCCTGTCTGATCATCACCATTTTGAAAAAAATGGGGATAA
TAAACCAGCCTATAGAGATCGATGGGTAGGAAAAGTTAATTTCGTGGAGATACGATCATTCTTGCATGTCTTTAGAAGCTTTGATCGAATGTGGAGTTTT
TTTATCCTGTGCTTACAGGCTATGATTACGGTTGCTTGGCATGGTTCGGGGCAACCAAGTGTTATCTTTAGCGGTGATGTATTTAAGAAAGTATTGAGTG
TCTTCATTACTGCTGCAATATTAAAGCTCGGGCAAGCTATCCTTGATGTCATTCTTAATTGGAAGGCACGACAAATAATGTCATTCCATGTCAAGTTGAG
ATTTATTCTGAAGGTTGTTTCAGCTGCTGCATGGGTGGTAGTTTTACCAGTAACTTATGCTTACACTTGGGATGATAAACCTCCAGGATTTGCCCAAACC
ATCAAAGGTTGGTTTGGCAATGGTTTCAGCTCGCCTTCCTTGTTTATATTGGCTGTAGTTATCTACCTGGCACCAAATATGCTGGCTGCAGTATTGTTTC
TTTTTCCCTTCATACGTCGATTCCTTGAGAGGTCTAACTATAGGATCGTGATGCTTATGATGTGGTGGTCACAGCCTCGGCTCTATGTTGGGAGGGGAAT
GCATGAGAGTACAATTTCTCTCTTCAAGTATACAATGTTTTGGGTTCTTCTTATTATAACAAAGTTGACATTTAGTTACTATATAGAGATAAGGCCTCTA
GTTGTTCCAACAAAAGCCATAATGAGTGTTCATATAACTACTTTCCAATGGCATGAATTCTTTCCACGAGCAAAGAACAATATTGGTGTTGTGATTGCAC
TCTGGGCTCCAATTATTCTTGTATATTTTATGGATTCTCAGATTTGGTATGCCATATTTTCCACCTTCTTTGGAGGTATTTATGGTGCATTTCGACGGCT
TGGAGAGATTCGAACATTGGGAATGCTTAGATCTCGTTTCCAATCATTGCCTGGTGCTTTCAATGCCTGTTTAATTCCAGGGGATAAGAGTGAGCCAAAG
AAGAAAGGCTTTAAGGCAACCCTGTCTCGCAAATTTGCTGAGATCCCATCTAACAAAGAAAAGGAGGCAGCAAGATTTGCTCAGTTGTGGAATAAAATCA
TCAGTAGTTTCAGAGAAGAAGACCTTATAAGCAATAAGGAGATGGACTTGTTGCTTGTTCCATATTGGGCTGACCGTGATTTGGACCTTATACAGTGGCC
TCCATTTCTGCTGGCTAGCAAGATCCCAATAGCATTAGACATGGCTAAGGACAGTAACGGTAAGGATAAGGAGCTGAAAAAGAGAATCGAGTTTGACAAC
TACATGTCTTGTGCTGTTCGTGAATGCTATGCTTCTTTCAAGAACATCATCTTGTTTTTGGTTCAAGGGAAACGTGAGAAAGAGGTGATCGATTTCATAT
TCTCTGAAGTTAACATACACATAGACGGAGGTGATTTGATAAGTGAATACAAAATGAGTGCTCTTCCGTTCCTCTATGATCACTTTGTGAAGCTTATCAA
ATACTTGCTGGCTAATAAACCGGAGGACAGGGATCAAGTTGTGATTCTCTTTCAGGACATGCTGGAGGTTGTGACAAGAGACATAATGATGGAGGATCAT
ATATCCAATCTGGTGGATTCTATTCATGGCGGATCTGGACATGAGGGAATGACTCTCCATGAACGACAATATCAGTTATTTGCATCTTCTGGAGCTATCA
AGTTTCCAATTGAACCAGTCACAGAAGCATGGAAAGAGAAGATCAAGAGGCTTTTTCTTTTGCTTACCACGAAAGAATCCGCGATGGATGTACCATCCAA
CTTAGAAGCTAGGAGGCGTATATCTTTCTTCTCAAACTCACTGTTTATGGACATGCCTACTGCACCTAAAGTTCGCAATATGCTTTCTTTCTCTGTTTTA
ACTCCTTACTATACAGAGGATGTGCTTTTCTCCTTGCTTGATTTGGAAGTGCCAAATGAAGATGGTGTTTCCATCCTCTTTTACTTGCAAAAGATCTTTC
CAGATGAGTGGAACAACTTTCTTGAACGAGTGGACTGCAGCAGTGAAGAAGAACTCAAAGGAAGAGACAACTTGGATGAAGAACTTCGTTTATGGGCATC
ATATAGGGGCCAAACTTTGACTAGAACGGTGAGAGGTATGATGTACTATCGGCATGCTTTGGAGCTTCAGGCATTCCTTGATATGGCTGGAGATGAAGAT
TTGATGGAGGGCTATAAGGCTATTGAATTGAGTACTGATGATCAGTCGAAGGGGGGAAGGTCACTGTTGGCACAGTGTCAGGCAGTTGCTGATATGAAAT
TTACGTATGTAGTATCATGCCAGAAATATGGGATTCACAAGCGGTCCGGTGATCCTCGTGCACAGGATATTTTGAGGCTCATGACAACATATCCATCTCT
CCGTGTGGCATACATTGATGAGGTTGAAGAAACTAATCCAGACAGATCCAAGGTCATCCAAAAAGTTTACTATTCATCTCTAGTGAAGGCAGCCTTACCT
AAGTCCATTGATTCCTCTGAGCCAGTGCAAAACTTGGACCAGGTCATTTATCGAATAAAACTTCCAGGACCAGCCATCTTGGGTGAAGGAAAACCAGAAA
ACCAAAACCATGCTATTATCTTCACACGTGGAGAAGGCTTGCAAACAATAGATATGAACCAGGATAACTACATGGAAGAAGCCTTGAAAATGAGGAATTT
GCTGCAAGAATTTCTTAAAAAGCCTGATGGTGTGAGGAATCCTTCGATACTTGGGCTTAGAGAGCATATATTTACTGGAAGTGTTTCATCTCTTGCATGG
TTTATGTCAAATCAGGAAACCAGTTTTGTGACTATCGGTCAGAGGCTATTGGCCAACCCTCTTAAGGTGCGGTTCCACTATGGTCATCCGGATGTATTTG
ATAGGCTTTTTCACTTGACTAGAGGGGGTGTCAGTAAAGCTTCTAAGGTTATCAATCTGAGTGAAGATATATTTGCCGGCTTCAATTCTACACTACGTGA
AGGGAATGTTACCCATCATGAATATATACAAGTTGGGAAGGGGAGAGATGTGGGCCTCAATCAGATTTCTATGTTTGAGGCCAAAATAGCTAATGGAAAT
GGAGAGCAGACTTTGAGTCGTGATATATACCGGCTTGGACACCGCTTTGACTTTTTCCGAATGCTGTCTTGCTACTTCACCACAGTTGGTTTTTACTTCA
GCACTCTGATAACCGTGCTCACGGTGTATGTATTTCTTTATGGCCGCCTCTATCTTGTTCTCAGTGGACTTGAAGAAGGTTTGAGCACACAGAAAGCAAT
TCGAGACAACAAACCTCTTCAAGTGGCTCTTGCATCTCAATCTTTTGTTCAAATTGGATTTTTGATGGCGTTGCCTATGTTGATGGAAATTGGCTTGGAA
AGGGGTTTCCGCACTGCACTAAGTGAATTTATACTGATGCAATTACAACTAGCACCTGTATTTTTCACATTTTCTCTTGGCACAAAGACCCACTACTATG
GAAGGACATTGCTCCATGGAGGTGCGAAATATAGGCCCACTGGTAGAGGGTTTGTAGTGTTCCATGCCAAGTTTGCTGACAATTACAGGCTCTATTCCCG
CAGTCATTTTGTGAAGGGTATTGAGATGATGATTTTGCTCGTTGTGTATCAAATATTTGGTCAGCCATACAGAAGTGCAGTCGCCTATCTCTTAATAACT
ATATCTATGTGGTTTATGGTTGGTACCTGGCTTTTTGCTCCATTCCTCTTCAATCCTTCTGGATTTGAGTGGCAGAAGATTGTTGATGATTGGACTGATT
GGAACAAGTGGATAAGTAACCGTGGAGGAATAGGTGTTCCATCAGAGAAGAGTTGGGAATCATGGTGGGAAGAAGAACAGGAGCATCTTCGTCACTCTGG
AAAGCGTGGTATTCTAGCAGAGATATTGTTATCTCTAAGATTCTTTATCTATCAATATGGACTAGTATATCATTTAACGATCACAAAGAAAACCAAAAGT
TTTTTGGTCTATGGTGTATCATGGCTGGTCATCTTTCTAATATTGTTCGTGATGAAGACCGTATCTGTTGGGCGGCGAAAGTTCAGTGCTAACTTCCAGC
TTGCGTTCCGTCTAATTAAGGGAATGATATTCCTAACATTTATCTCCATTCTTGTCACTTTGATTGCACTGCCTCATATGACGGTGCAGGACATCTTTGT
ATGCATTCTTGCTTTCATGCCAACTGGCTGGGGGATGCTTTTGATTGCACAAGCATGCAAGCCAATCGTTCAACGAGCAGGGTTTTGGGGATCAGTTCAG
ACACTTGCTCGTGGTTACGAAATCGTTATGGGCTTGCTCCTGTTCACTCCAGTTGCATTCCTTGCCTGGTTTCCATTTGTGTCTGAATTCCAGACTCGTA
TGCTGTTCAACCAAGCATTTAGTAGAGGTCTGCAAATTTCTCGAATTCTTGGCGGCCCAAGGAAGGATCGCTCTTCAAGGAACAAGGAGTGA
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AA sequence
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>Potri.001G012200.6 pacid=42791242 polypeptide=Potri.001G012200.6.p locus=Potri.001G012200 ID=Potri.001G012200.6.v4.1 annot-version=v4.1
MSSTSRGGGMGMDQAAGGPLATPPQTQRRLTRTQTAGNLGESIFDSEVVPSSLVEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQF
KTALLQRLERENDPTLMGRVKKSDAREMQSFYQHYYKKYIQALHNAADKADRAQLTKAYQTANVLFEVLKAVNTTQSIEVDREILEAQDKVAEKTQIYLP
YNILPLDPDSANQAIMRYPEIQAAVVALRNTRGLPWPKDYKKKNDEDVLDWLQAMFGFQKDNVANQREHLILLLANVHIRQFPKPDQQPKLDERALTEVM
KKLFKNYKKWCKYLDRKSSLWLPTIQQEVQQRKLLYMGLYLLIWGEAANLRFMPECICYIYHHMAFELYGMLAGNVSPMTGENVKPAYGGEEEAFLSKVV
TPIYNMIAKEAERSKKGKSKHSQWRNYDDLNEYFWSVDCFRLGWPMRADADFFCLSDHHHFEKNGDNKPAYRDRWVGKVNFVEIRSFLHVFRSFDRMWSF
FILCLQAMITVAWHGSGQPSVIFSGDVFKKVLSVFITAAILKLGQAILDVILNWKARQIMSFHVKLRFILKVVSAAAWVVVLPVTYAYTWDDKPPGFAQT
IKGWFGNGFSSPSLFILAVVIYLAPNMLAAVLFLFPFIRRFLERSNYRIVMLMMWWSQPRLYVGRGMHESTISLFKYTMFWVLLIITKLTFSYYIEIRPL
VVPTKAIMSVHITTFQWHEFFPRAKNNIGVVIALWAPIILVYFMDSQIWYAIFSTFFGGIYGAFRRLGEIRTLGMLRSRFQSLPGAFNACLIPGDKSEPK
KKGFKATLSRKFAEIPSNKEKEAARFAQLWNKIISSFREEDLISNKEMDLLLVPYWADRDLDLIQWPPFLLASKIPIALDMAKDSNGKDKELKKRIEFDN
YMSCAVRECYASFKNIILFLVQGKREKEVIDFIFSEVNIHIDGGDLISEYKMSALPFLYDHFVKLIKYLLANKPEDRDQVVILFQDMLEVVTRDIMMEDH
ISNLVDSIHGGSGHEGMTLHERQYQLFASSGAIKFPIEPVTEAWKEKIKRLFLLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPTAPKVRNMLSFSVL
TPYYTEDVLFSLLDLEVPNEDGVSILFYLQKIFPDEWNNFLERVDCSSEEELKGRDNLDEELRLWASYRGQTLTRTVRGMMYYRHALELQAFLDMAGDED
LMEGYKAIELSTDDQSKGGRSLLAQCQAVADMKFTYVVSCQKYGIHKRSGDPRAQDILRLMTTYPSLRVAYIDEVEETNPDRSKVIQKVYYSSLVKAALP
KSIDSSEPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLKKPDGVRNPSILGLREHIFTGSVSSLAW
FMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGN
GEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLSTQKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLE
RGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGIEMMILLVVYQIFGQPYRSAVAYLLIT
ISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPSEKSWESWWEEEQEHLRHSGKRGILAEILLSLRFFIYQYGLVYHLTITKKTKS
FLVYGVSWLVIFLILFVMKTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVTLIALPHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQ
TLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G012200 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.