Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ANNAT3.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G38760 395 / 1e-138 ANN3, ANNAT3 annexin 3 (.1) AT5G12380 261 / 4e-86 ANNAT8 annexin 8 (.1) AT5G10230 259 / 4e-85 ANN7, ANNAT7 annexin 7 (.1) AT5G65020 255 / 8e-84 ANNAT2 annexin 2 (.1.2) AT5G10220 248 / 1e-80 ANN6, ANNAT6 ANNEXIN ARABIDOPSIS THALIANA 6, annexin 6 (.1) AT1G35720 241 / 3e-78 ATOXY5, ANNAT1 annexin 1 (.1) AT1G68090 191 / 1e-58 ANN5, ANNAT5 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) AT2G38750 132 / 6e-36 ANNAT4 annexin 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G092500 [exp] 258 / 8e-85 AT5G65020 488 / 2e-175 annexin 2 (.1.2) Potri.003G200700 [exp] 253 / 5e-83 AT5G12380 399 / 3e-140 annexin 8 (.1) Potri.002G095600 [exp] 253 / 1e-82 AT1G35720 481 / 1e-172 annexin 1 (.1) Potri.005G075900 [exp] 250 / 1e-81 AT5G65020 472 / 3e-169 annexin 2 (.1.2) Potri.001G277500 [exp] 233 / 3e-75 AT5G12380 442 / 3e-157 annexin 8 (.1) Potri.015G031800 [exp] 216 / 1e-68 AT1G68090 356 / 3e-123 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.012G041900 [exp] 204 / 1e-63 AT1G68090 358 / 3e-124 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.008G139500 [exp] 180 / 2e-54 AT1G68090 363 / 4e-126 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.010G101800 [exp] 169 / 2e-49 AT1G68090 343 / 3e-117 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024174 [exp] 437 / 2e-155 AT2G38760 361 / 4e-125 annexin 3 (.1) Lus10024172 [exp] 399 / 3e-140 AT2G38760 349 / 1e-120 annexin 3 (.1) Lus10039550 [exp] 375 / 3e-130 AT2G38760 323 / 2e-109 annexin 3 (.1) Lus10039547 [exp] 319 / 6e-109 AT2G38760 271 / 4e-90 annexin 3 (.1) Lus10024054 [exp] 256 / 5e-84 AT5G65020 400 / 6e-141 annexin 2 (.1.2) Lus10008227 [exp] 243 / 8e-79 AT1G35720 476 / 9e-171 annexin 1 (.1) Lus10041140 [exp] 240 / 8e-78 AT1G35720 414 / 2e-146 annexin 1 (.1) Lus10003611 [exp] 240 / 9e-78 AT1G35720 476 / 1e-170 annexin 1 (.1) Lus10041696 [exp] 240 / 1e-77 AT5G65020 395 / 2e-138 annexin 2 (.1.2) Lus10036470 [exp] 229 / 1e-73 AT1G35720 406 / 3e-143 annexin 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00191 [poplar] [flax] Annexin Annexin
Representative CDS sequence Show only first row Show all	>Potri.001G024800.1 pacid=42791493 polypeptide=Potri.001G024800.1.p locus=Potri.001G024800 ID=Potri.001G024800.1.v4.1 annot-version=v4.1 ATGGCTACTCTCAGGGTACCAGAGGTTGTTCCTTCTCCAACCCAAGATTGTGAGAAACTCAGAGATGCCGTCCAAGGATTGGGGACAGATGAGAAAGCAA TTATATGGATATTAGGACATAGAAATGCAAGTCAAAGGAAGAAAATCAGAGAGACATATCAGCAGCTTTACAATGAATCCCTCATCGATCGTCTCAACTC TGAGTTATCTGGTGATTTTAGAAAAGCGGTGATCTTGTGGACCACTGACCCCCCAGAGAGGGATGCAAAACTGGCAAATGAAGCACTGAAAGCTAATAAG AAAGGCATGAAACAGCTGCAAGTGGTAGTTGAGATAACATGTGCATCATCTCCTAACCATCTTCAGGAAGTAAGGCAAGCCTACTGCTCTATTTTTGATT GCTCACTTGAAGAAGATATTGTATCTGCAGTCCCCTTGCCACTCAGAAAGATTTTGGTGGCTGTAGCAAGCTCTTACAGGTATGATAAAGAACTGGTGGA TACAAAAGTCGCCAACGCAGAGGCAGCTAAATTACATGAAGTCATCAAATCAAAGAAATTAGATCAGGATGACATAATACTTATACTCAGCACTAGGAAC TTTCATCAACTAAGAGCAACTTTCGCATGCTACAACCAGAACTTTGGAAATTCCATTGACCAGGACATCAAGAGTTGTGGAAAGGGAGATTTGGAATCTC TTTTGAGAGTGGTAATTAAGTGCATAGACACCCCAGAGAAACACTTTGCAGAGGTCATTGGAGAAGCCATCATTGGGTTCGGAACAGATGAAGATTCACT GACTAGAGCAATAGTAGCGCGAGCTGAGATCGATACGATGAAGATCAGAGGGGAGTATTTCAACATCTTTAAAACCAACCTTGATGGTGCAGTTACTGGT GATACTTCAGGAGACTATAAAGACTTCTTGATGACCTTACTTGGTGCAAGAATCTGA
AA sequence Show only first row Show all	>Potri.001G024800.1 pacid=42791493 polypeptide=Potri.001G024800.1.p locus=Potri.001G024800 ID=Potri.001G024800.1.v4.1 annot-version=v4.1 MATLRVPEVVPSPTQDCEKLRDAVQGLGTDEKAIIWILGHRNASQRKKIRETYQQLYNESLIDRLNSELSGDFRKAVILWTTDPPERDAKLANEALKANK KGMKQLQVVVEITCASSPNHLQEVRQAYCSIFDCSLEEDIVSAVPLPLRKILVAVASSYRYDKELVDTKVANAEAAKLHEVIKSKKLDQDDIILILSTRN FHQLRATFACYNQNFGNSIDQDIKSCGKGDLESLLRVVIKCIDTPEKHFAEVIGEAIIGFGTDEDSLTRAIVARAEIDTMKIRGEYFNIFKTNLDGAVTG DTSGDYKDFLMTLLGARI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G38760		ANN3, ANNAT3	annexin 3 (.1)		Potri.001G024800 [exp]	0	1	ANNAT3.1
AT4G14860	OFP	ATOFP11	ovate family protein 11 (.1)		Potri.008G153500 [exp]	1.00	0.9467
AT3G47180			RING/U-box superfamily protein...		Potri.002G080900 [exp]	6.48	0.9002
AT1G80760		NLM7, NIP6;1	NOD26-like intrinsic protein 6...		Potri.001G046800 [exp]	11.91	0.8615	Pt-NIP6.1
AT1G68260			Thioesterase superfamily prote...		Potri.010G123102 [exp]	13.30	0.8670
AT4G37370		CYP81D8	"cytochrome P450, family 81, s...		Potri.005G143800 [exp]	21.35	0.8254	CYP81S7,CYP81.2
AT1G08650		ATPPCK1, PPCK1	phosphoenolpyruvate carboxylas...		Potri.010G071400 [exp]	22.69	0.9094
					Potri.008G023250 [exp]	26.72	0.8199
AT4G25500		ATRSP40, AT-SRP...	ARABIDOPSIS THALIANA ARGININE/...		Potri.002G153600 [exp]	29.84	0.8374
AT1G07080			Thioredoxin superfamily protei...		Potri.012G107300 [exp]	30.14	0.8957
AT5G22860			Serine carboxypeptidase S28 fa...		Potri.001G212900 [exp]	33.80	0.8142

Compare expression of checked genes

Potri.001G024800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.