Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ANNAT4.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G38750 372 / 2e-129 ANNAT4 annexin 4 (.1) AT1G35720 206 / 1e-64 ATOXY5, ANNAT1 annexin 1 (.1) AT5G65020 198 / 2e-61 ANNAT2 annexin 2 (.1.2) AT5G10230 197 / 2e-61 ANN7, ANNAT7 annexin 7 (.1) AT5G12380 187 / 2e-57 ANNAT8 annexin 8 (.1) AT5G10220 184 / 3e-56 ANN6, ANNAT6 ANNEXIN ARABIDOPSIS THALIANA 6, annexin 6 (.1) AT2G38760 171 / 7e-51 ANN3, ANNAT3 annexin 3 (.1) AT1G68090 139 / 9e-39 ANN5, ANNAT5 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G095600 [exp] 219 / 7e-70 AT1G35720 481 / 1e-172 annexin 1 (.1) Potri.007G092500 [exp] 208 / 2e-65 AT5G65020 488 / 2e-175 annexin 2 (.1.2) Potri.005G075900 [exp] 204 / 9e-64 AT5G65020 472 / 3e-169 annexin 2 (.1.2) Potri.001G277500 [exp] 198 / 2e-61 AT5G12380 442 / 3e-157 annexin 8 (.1) Potri.003G200700 [exp] 193 / 1e-59 AT5G12380 399 / 3e-140 annexin 8 (.1) Potri.001G024800 [exp] 180 / 1e-54 AT2G38760 395 / 1e-138 annexin 3 (.1) Potri.015G031800 [exp] 139 / 1e-38 AT1G68090 356 / 3e-123 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.012G041900 [exp] 138 / 2e-38 AT1G68090 358 / 3e-124 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.008G139500 [exp] 126 / 6e-34 AT1G68090 363 / 4e-126 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024171 [exp] 409 / 3e-144 AT2G38750 318 / 1e-108 annexin 4 (.1) Lus10039551 [exp] 372 / 6e-130 AT2G38750 311 / 7e-106 annexin 4 (.1) Lus10008227 [exp] 205 / 3e-64 AT1G35720 476 / 9e-171 annexin 1 (.1) Lus10003611 [exp] 205 / 4e-64 AT1G35720 476 / 1e-170 annexin 1 (.1) Lus10024054 [exp] 196 / 8e-61 AT5G65020 400 / 6e-141 annexin 2 (.1.2) Lus10041140 [exp] 191 / 8e-59 AT1G35720 414 / 2e-146 annexin 1 (.1) Lus10036470 [exp] 191 / 1e-58 AT1G35720 406 / 3e-143 annexin 1 (.1) Lus10041696 [exp] 188 / 3e-57 AT5G65020 395 / 2e-138 annexin 2 (.1.2) Lus10019780 [exp] 185 / 3e-56 AT5G12380 372 / 1e-129 annexin 8 (.1) Lus10024174 [exp] 178 / 9e-54 AT2G38760 361 / 4e-125 annexin 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00191 [poplar] [flax] Annexin Annexin
Representative CDS sequence Show only first row Show all	>Potri.001G024900.1 pacid=42791834 polypeptide=Potri.001G024900.1.p locus=Potri.001G024900 ID=Potri.001G024900.1.v4.1 annot-version=v4.1 ATGGCTAATTTGGAAGCTCTTGCCAAGGCTTTCACAGGACTTGGAGTTGATGAGAAGTCATTAATAGAAAATCTGGGAAAATCACATCCTGAACAGAGAA CATTATTCAGAAAAAAAACTCCCCAACTTTTCATAGAGGATGAACGATCTTTTGAACGTTGGAATGATCACTGTGTCAGACTTCTTAAGCATGAATTCGT GCGATTTAAGAATGCTTTGGTGCTTTGGGCTATGCATCCTTGGGAAAGAGATGCTCGTTTGGTAAAGGAGGCATTAAAGAAGGGTCCACAATCTTATGGT GTGATCGTAGAGATTGCTTGTACAAGATCATCAGAAGAGCTGTTAGGAGCTAGAAAAGCTTACCATTCTCTCTTTGATCAATCCATTGAAGAAGATGTCG CCACCCACATCCATGGCAGTGAGCGCAAGCTTTTGGTAGCACTTGTAAGTGCCTATAGGTATGAAGGCCCAAAGGTTAAGGAAGACGCTGCAAAATCTGA AGCTAAAATACTTGCTAATGCTATTAAGAATGGTAACAAGAAGAACCCCATTGAGGATGAAGAGGTGATCAGAATACTATCAACAAGAAGCAAGGCTCAT CTCAAAGTAGTGTACAAACACTACAAGGAGGTTTCTGGAAATAATATTCATGAGGATCTTGATGCTTCTGACTTGATCTTGAAAGAGACAGTTGAATGCT TATGCACCCCTCATGCATATTTCAGCAAGGTTTTGGATGAGGCAATGAGCAGTGATGCACACAAGAACACCAAAAAGGGTCTGACTCGAGTAATTGTGAC CCGAGCAGATGTGGATATGAAGGAGATTAAAGAAGAATACATGAACTTGTTTGGAGTTTCTCTATCCAAGAAAATTGAAGAAAAAGCAAATGGGAACTAC AGGGATTTCTTGGTTACCCTGATAACAAGAGATAATTGA
AA sequence Show only first row Show all	>Potri.001G024900.1 pacid=42791834 polypeptide=Potri.001G024900.1.p locus=Potri.001G024900 ID=Potri.001G024900.1.v4.1 annot-version=v4.1 MANLEALAKAFTGLGVDEKSLIENLGKSHPEQRTLFRKKTPQLFIEDERSFERWNDHCVRLLKHEFVRFKNALVLWAMHPWERDARLVKEALKKGPQSYG VIVEIACTRSSEELLGARKAYHSLFDQSIEEDVATHIHGSERKLLVALVSAYRYEGPKVKEDAAKSEAKILANAIKNGNKKNPIEDEEVIRILSTRSKAH LKVVYKHYKEVSGNNIHEDLDASDLILKETVECLCTPHAYFSKVLDEAMSSDAHKNTKKGLTRVIVTRADVDMKEIKEEYMNLFGVSLSKKIEEKANGNY RDFLVTLITRDN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G38750		ANNAT4	annexin 4 (.1)		Potri.001G024900 [exp]	0	1	ANNAT4.1
AT2G30070		ATKUP1, ATKT1P,...	POTASSIUM UPTAKE TRANSPORTER 1...		Potri.005G095900 [exp]	1.41	0.9032
					Potri.013G101801 [exp]	1.73	0.8880
AT4G25150			HAD superfamily, subfamily III...		Potri.001G191000 [exp]	21.30	0.8940
AT5G36890		BGLU42	beta glucosidase 42 (.1.2)		Potri.010G178800 [exp]	21.65	0.8441
					Potri.001G203700 [exp]	22.62	0.8708
					Potri.015G120700 [exp]	36.40	0.8671
AT1G03230			Eukaryotic aspartyl protease f...		Potri.001G240600 [exp]	41.56	0.8580
AT3G59140		ATMRP14, ABCC10	ATP-binding cassette C10, mult...		Potri.003G135800 [exp]	44.54	0.8347
AT2G29125		RTFL2, DVL13	DEVIL 13, ROTUNDIFOLIA like 2 ...		Potri.001G242800 [exp]	50.64	0.8333
AT1G17830			Protein of unknown function (D...		Potri.017G155200 [exp]	63.75	0.7467

Compare expression of checked genes

Potri.001G024900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.