Potri.001G027232 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G027232.3 pacid=42787834 polypeptide=Potri.001G027232.3.p locus=Potri.001G027232 ID=Potri.001G027232.3.v4.1 annot-version=v4.1
ATGCCTAAAGTGTATGCATTCATGTCCAAGGGGGTGTGTGCGTTCAGAAGTGATTGGTGCTTCATATATGCACCTGCGACCATGCTTGCCAGTCCAAGAA
ATCTTGTTTGGTCTTATGTCTTACTGACACGGCTAGGAACGGGTTACTTATTCAATGCCTCAGTTATGCAAATCCTGAAGACAATTCCTGCTGAGACTAG
AAAAAAGCTAGGTGGAAAAGGTTATTTCCCTCAAGATGGTTATATCCTACAGCAGCTACCTGTCCCTCCAAACTGTCTCTCTGTTCCTGCTGTTTCAGAT
GGCATTAGCATCATGTCTTCAGATCTCTCTATATCCATACTCAAGAAAGTTCTGAAGCAAGTTGAAGTCATCAAAAGCTCACGGTCAGGGGCACCAAATT
TTGATGCACATAAAGACGAAGCAAATTCATTGCAATCAATGGTTGACCGGTGTCTTCAAGTCAGGGGTACTACAAAGACATCCCGTGATGTAGATGTCCG
TTATGGGGTAAAAAAGGATTCCAGTGAATCCTCAACCAAAGCTTGGCTTGAGAAGATGAGGACCCTGTTCATAAGAAAAGGTTCTGGATTCTCTTCACGC
AGTGTCATAACTGGAGATGCGTACACAAAAGTGAACCAAGTTGGTATTCCCTATGAGATTGCTCAAAGAATTACGTTTGAGGAGAGGGTCAGTGTGCACA
ACATGAGGTATCTACAAGAGCTTGTGGATAACAAATTGTGCCTGACATACAGGGATGGTTCTTCCACCTATTCTCTTAGGGAAGGCTCCAAGGGGCATAC
ATTTCTACGACCTGGGCAAGTTGTACATAGGCGGATTATAGATGGCGATGTTGTTTTCATTAATAGACCGCCAACAACACACAAACATTCTTTACAAGCG
CTGTCAGTGTATGTTCATGATGATCATACGGTGAAGATCAATCCTCTGATATGTGGGCCCTTAAGTGCTGATTTTGATGGCGATTGCGTTCACCTTTTCT
ACCCCCAGTCCCTCGCTGCAAAAGCTGAAGTCTTGGAGCTTTTCTCAGTGGAGAAACAATTGCTTAGCTCCCATAGTGGCAATCTGAATTTACAGCTGAC
AACAGACTCACTTCTGTCATTAAAGATGATTTTCAAGGCCTGCTTTTTGGACAAATCAGCTGCACAGCAACTGGCAATGTTTGTCTCACCTGATTTGCCA
CAACCAGCTTTGTTGAAGGTCAATTGTATTCGCCCATACTGGACTGCCCATCAGATTCTCCAAATGGCTTTACCAACTTGCTTCAACTGCAGTGGAGAGA
GATTCTTGATCAACAATAGTAATGTCTTGAAGGTTGATTTCAACAGGGATGTTGTGGCATCAATGATTAATGAGATTCTGATCTCAATTTTCTTCGAGAA
GGGTTCCGGAGCAGTGCTTGAGTTCTTCAACGCCTTGCAGCCCTTGCTAATGGAAAATCTGTTCTCCGAAGGCTTTAGTGTTAGTTTGAAAGATTTCTCC
ATCTCCCAGGCAGTCAAACAAAGTATCCAAGAAAGTTTCAAGGTGATTTCTCCTTTGCTTTGTAACTTAAGATCCACCTACAATGAGCTGGTTGAGTTGC
AAGTAGAGAATCACATCCAGGATGTGAAAAAGCCAGTTCGAGAATTTATTTTAACTTCCTCTGCCTTGGGTTATTTGATTGACTCTAAGAGTGACGGGGC
TGTTGCTAAGCTTGTTCAGCAAATTGGCTTCTTGGGCTTGCAAGTTTCTGATAGGGGAAAACTTTATTCTAAGACCCTGGTTGAAGACTTGGCCTCCCAT
TTTCAGAGCAAGTATCCTACCAATTTGCTTAATTATCCTTCTGCCCAGTATGGCTTGATTCAAAGCAGTTTTTTTCATGGGTTGGATGCGTATGAGGAGA
TGGCTCATTCCATTTCTACTAGAGAAGTCATTGTGCGTTCATCAAGAGGGTTGTCTGAGCCAGGAACGTTGTTCAAAAACTTAATGGCCATCCTCCGAGA
TGTGGTAATTTGTTATGATGGCACTGTAAGAAATGTCTGCAGCAATTCAATCATCCAATTTGAGTATGGTGTGAAGGTGGGAGCTGAGTCCCAAAGTTTA
TTCCCTGCTGGTGAACCTGTTGGCGTGTTAGCTGCCACTGCAATGTCCAATCCTGCATACAAAGCTGTTCTTGATTCTACTCCAAGTAGCAATTCCTCGT
GGGATATGATGAAGGAAATACTTCTTTGCAAAGTTGGTTTCAAGAATGACCAAGCTGATCGCAGGGTAATTTTATACTTTAATTATTGTGGATGTGGAAG
AGAGCATTGCCAAGAAAAAGCAGCATTTTTGGTCAAGAATCACTTGGAAAAAGTCAGTCTTAAAGACGTTGCCAAGTGTTTTATGATTGAATACAAGAAT
CAACAAATACCAGAAAGTTTTGGAAGTGATGCCGGCCTTGTTGGTCATGTTCATCTTGAGAAGAGGATTTTGCAAGAGTTGAACATTAGTGCTCAGGTGA
TTCTTGAGAAGTGCCAAGAGACTGTCAACTCATTTCGAAAGAAGAAAAAAGTTGGTAATCTTTTTAAGAAGACAACGTTGTCTATCAGTGAATGTTGCTC
TTTCGAGCAATGCACTGATGAATTGCTGTGCCTGATGTTCTTTTGGCAAGATGCAAATGATGTTCATTTGGAGAGGACTTCAAACATTCTTGCTGATATG
ATTTGCCCAGTTCTGCTGGAAACAACCATCAAAGGTGACCATCGAATTTCCTGTGCAAATATAATTTGGGCAAGTCAGGAGACAACAACTTGGATAAGAA
ACCCTTCCAGGACTCAAAAGGGGGAGTTGGCTTTAGATATTGTTCTGGAGAAATCTGTTGTCAAGCAAAGTGGTGATGCTTGGAGAATAGTCTTGGACTC
ATGTCTTCCTGTCCTTCATTTAATTGACACCACACGTTCAATTCCTTATGCGATTAAACAAGTTCAGGAATTGTTGGGAGTTTCTTGTGCATTTGACCAA
GCAGTTCAGCGCCTCTCAAAATCGGTAACCATGGTGGCAAAAGGTGTTCTAAAAGAGCATCTCATTCTACTTGGGAACAGTATGACATGTGCTGGAAGCT
TGATCGGCTTCTATACTGGGGGTTATAAAACATTATCTCGATCATTGGATATCCAAGTGCCATTTACCGAGGCCACTCTCTTTACACCGAGGAAATGTTT
TGAGAAGGCTGCAGAGAAGTGCCACACTGATTATTTATCAAGCATAGTTGCTTCTTGCTCATGGGGCAAGCATGTTACTGTTGGAACAGGTTCACGCTTT
GATGTCCTCTGGGACACAAAAGAGGCATGTTTGAATCCAGAGGGTGGCATAGATGCATACAGTTTTCTAAATATGGTGAGAAGTACTGCTGGTGGAGAAG
AGTCAGTTACTGCTTGTTTGGGTGCCGAAGTTGATGATCTTATTCTGGAAGATGAAGACTGGAACCTGTCTCCTGAGCATCACTCTAGTTCTGATAAGCC
TACCTTTGAAGACAGTGCTGAATTTCAAGACTTCTTAGGCAATCAACCTGCCGAGTCAAACTGGGGAAAGGCTTCATCTTTAAAGGATGGGTCTTGGAGC
GCTGGAAATTGGGATGTTGATAAAAATGACTCTGCAGGTAAGGAAAAACCTTGGAGTTTGGGAATGAGTTCAGCTGAGACAAGTGATGTTGGCTGGGACA
CTGCAGCTACCAGGAAGATAAATTCCTCCTGGAATTCAGAGAATGACGTAACGCAGTCCAATTCCTTGTCTGGTTGGGCAACAAAAAATTCTGAAACCCA
TAATGGCTTCGCAACTAAAGTCCAAGAAAAACCTGCAAGGTCCAATGATTGGGATGTTGGTACTGCCTGGGGGAGAAAGGCTGGAGATGACAAATTTGCA
AATGTAACTAAGTCTTGGTGGGGGAAGGTAACAGATGGTGATGAATCTGAACAAAATAAAAACAAGCAACATCAGGAAGACCAAGAATTAGGGACACATG
GTTGGGATGATAAGATGTCACCGGACCAGTTAATATCTGGTTGGGCTTCTACAACTACCCAAGAGGCTACCACTGAATCCTGCAGTTCGAAGGCTGCATC
TGTTTGGGGGACAAAGAATACCAACGTTGATGAACAGGGAAGTGAGAATCATGTTCTTCTGAACCAAGCTAAAGAGTCATCTGATTGGAATAAAAAAAGC
AATTCAAATCAGACAGATGCAGCATGTGGTTCAAAGGCTGCATCCTCTTGGGGGGCAAAAAATACAGATGCTGATAAACGTTGGGGTAGGAAGGTGGATT
TGAATCAGGCAGACACATCCTGTAGTTGGGGGAGATCCAAGACACCGGATCGTGGATGGGGGTTGTCAAATTCTGGAGGTAGCATTGGAAGTGAAATGGA
GAACAAGACAGAAAATCAATCTCTGTTGGACAGAGGGAAAGAGTCAGTTGGTTGGGGGACAAAAAATACAGATGCTGATAAACCTTGGAGTAACAAGGTG
AATTCGAATCAAGCAGACACAGCCTCTGGTTGGGGGAAATCCAAGTCACTGGATCGCAGATGGGGAGTGTCAAATTCTGGAGGTGGCAATGGAAATGAAA
TGAATAACAAGACAGAAAATCAATCTCAGTTGGAAGGAGGAAAAGAGTCAGGAGGTTGGGGGGCAAAAAATACAGATGCTGATAAACCTTGGGGTAACAA
GGTGAATTCGAATCAGGCAGACACAGCCTCTTGTTGGGGGAAACCCAAGTCACCGGATCTTGGATGGGGGGTGTCAAATTCTGGAGGTGGCAATGGAAGT
GAAATGGAAGACAAGACAGAAAATCAATCTCTGCTGGACCGAGGGAAAGAGTCAGGTGGTTGGGGGAAGCCCAAGTCAATTTCACAAGGCTGGGGCTCGT
CCAAAGACTCAGTTAAGGCAGTTGATGGATGGGGGGTGCCAAATTCTGCAGGTAGCAATGGAAGTGAAAGGGATCAGCAATGGGGTCAGCAGAGTGGAGA
ATTCAAGAAAAACCGCACAGAAGGTTCTCGAGGTTGGGGATCAAATAATGGACATTGGAAGAAAAGGAACCGCCCTTCTAAACCCCATGAGGATTCTAGT
TCAAGTGGGCTATTTACCATGACTAGGCAGTGGTTAGACATATTCACTTCTCAAGAGCAGGATATTCTCTCTGATGTTGAGCCATTAATGCTTTCTATTA
GAAGAATAATGCATCAAACAGGGTACAGTGATGGGGATCCATTATCTGCTGATGATCAGTCCTATGTGCTTGATAATGTCTTCAATTATCATCCAGACAA
AGCAGTGAAGATGGGTGCTGGAATTAATCATGTCACTGTTAGCAGGCACAGCAATTTCCAGGAGAGCAGGTGCTTCTACATTGTCTCAACTGATGACTGC
AAACAAGATTTTTCCTACCGCAAATGTCTGGAGAACTTCATCAGGGGAAAATATCCTGACTTGGCAGATGAATTCATCGGAAAGTATTTTGCAAGAAGAG
GCAATCGGCAGCGCACCCCCGCTCCAGAGGGAACCGAGGAGAAACAGGCCACGTGA
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AA sequence
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>Potri.001G027232.3 pacid=42787834 polypeptide=Potri.001G027232.3.p locus=Potri.001G027232 ID=Potri.001G027232.3.v4.1 annot-version=v4.1
MPKVYAFMSKGVCAFRSDWCFIYAPATMLASPRNLVWSYVLLTRLGTGYLFNASVMQILKTIPAETRKKLGGKGYFPQDGYILQQLPVPPNCLSVPAVSD
GISIMSSDLSISILKKVLKQVEVIKSSRSGAPNFDAHKDEANSLQSMVDRCLQVRGTTKTSRDVDVRYGVKKDSSESSTKAWLEKMRTLFIRKGSGFSSR
SVITGDAYTKVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIIDGDVVFINRPPTTHKHSLQA
LSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMIFKACFLDKSAAQQLAMFVSPDLP
QPALLKVNCIRPYWTAHQILQMALPTCFNCSGERFLINNSNVLKVDFNRDVVASMINEILISIFFEKGSGAVLEFFNALQPLLMENLFSEGFSVSLKDFS
ISQAVKQSIQESFKVISPLLCNLRSTYNELVELQVENHIQDVKKPVREFILTSSALGYLIDSKSDGAVAKLVQQIGFLGLQVSDRGKLYSKTLVEDLASH
FQSKYPTNLLNYPSAQYGLIQSSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKVGAESQSL
FPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMKEILLCKVGFKNDQADRRVILYFNYCGCGREHCQEKAAFLVKNHLEKVSLKDVAKCFMIEYKN
QQIPESFGSDAGLVGHVHLEKRILQELNISAQVILEKCQETVNSFRKKKKVGNLFKKTTLSISECCSFEQCTDELLCLMFFWQDANDVHLERTSNILADM
ICPVLLETTIKGDHRISCANIIWASQETTTWIRNPSRTQKGELALDIVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQVQELLGVSCAFDQ
AVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEKCHTDYLSSIVASCSWGKHVTVGTGSRF
DVLWDTKEACLNPEGGIDAYSFLNMVRSTAGGEESVTACLGAEVDDLILEDEDWNLSPEHHSSSDKPTFEDSAEFQDFLGNQPAESNWGKASSLKDGSWS
AGNWDVDKNDSAGKEKPWSLGMSSAETSDVGWDTAATRKINSSWNSENDVTQSNSLSGWATKNSETHNGFATKVQEKPARSNDWDVGTAWGRKAGDDKFA
NVTKSWWGKVTDGDESEQNKNKQHQEDQELGTHGWDDKMSPDQLISGWASTTTQEATTESCSSKAASVWGTKNTNVDEQGSENHVLLNQAKESSDWNKKS
NSNQTDAACGSKAASSWGAKNTDADKRWGRKVDLNQADTSCSWGRSKTPDRGWGLSNSGGSIGSEMENKTENQSLLDRGKESVGWGTKNTDADKPWSNKV
NSNQADTASGWGKSKSLDRRWGVSNSGGGNGNEMNNKTENQSQLEGGKESGGWGAKNTDADKPWGNKVNSNQADTASCWGKPKSPDLGWGVSNSGGGNGS
EMEDKTENQSLLDRGKESGGWGKPKSISQGWGSSKDSVKAVDGWGVPNSAGSNGSERDQQWGQQSGEFKKNRTEGSRGWGSNNGHWKKRNRPSKPHEDSS
SSGLFTMTRQWLDIFTSQEQDILSDVEPLMLSIRRIMHQTGYSDGDPLSADDQSYVLDNVFNYHPDKAVKMGAGINHVTVSRHSNFQESRCFYIVSTDDC
KQDFSYRKCLENFIRGKYPDLADEFIGKYFARRGNRQRTPAPEGTEEKQAT
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G027232 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.