Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	G6PD.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13110 956 / 0 G6PD2 glucose-6-phosphate dehydrogenase 2 (.1) AT1G24280 927 / 0 G6PD3 glucose-6-phosphate dehydrogenase 3 (.1) AT5G35790 845 / 0 G6PD1 glucose-6-phosphate dehydrogenase 1 (.1) AT1G09420 538 / 0 G6PD4 glucose-6-phosphate dehydrogenase 4 (.1.2) AT3G27300 470 / 1e-160 G6PD5 glucose-6-phosphate dehydrogenase 5 (.1.2.3) AT5G40760 464 / 2e-158 G6PD6 glucose-6-phosphate dehydrogenase 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G168000 [exp] 1077 / 0 AT5G13110 950 / 0.0 glucose-6-phosphate dehydrogenase 2 (.1) Potri.014G166800 [exp] 859 / 0 AT5G35790 931 / 0.0 glucose-6-phosphate dehydrogenase 1 (.1) Potri.013G005200 [exp] 544 / 0 AT1G09420 815 / 0.0 glucose-6-phosphate dehydrogenase 4 (.1.2) Potri.001G337400 [exp] 466 / 3e-159 AT5G40760 910 / 0.0 glucose-6-phosphate dehydrogenase 6 (.1) Potri.017G070200 [exp] 459 / 2e-156 AT5G40760 902 / 0.0 glucose-6-phosphate dehydrogenase 6 (.1) Potri.005G005866 [exp] 85 / 2e-18 AT1G09420 133 / 4e-36 glucose-6-phosphate dehydrogenase 4 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003134 [exp] 961 / 0 AT5G13110 973 / 0.0 glucose-6-phosphate dehydrogenase 2 (.1) Lus10011340 [exp] 946 / 0 AT5G13110 967 / 0.0 glucose-6-phosphate dehydrogenase 2 (.1) Lus10006386 [exp] 847 / 0 AT5G35790 904 / 0.0 glucose-6-phosphate dehydrogenase 1 (.1) Lus10012340 [exp] 687 / 0 AT5G35790 705 / 0.0 glucose-6-phosphate dehydrogenase 1 (.1) Lus10014615 [exp] 457 / 6e-156 AT5G40760 905 / 0.0 glucose-6-phosphate dehydrogenase 6 (.1) Lus10032079 [exp] 460 / 2e-152 AT5G40760 873 / 0.0 glucose-6-phosphate dehydrogenase 6 (.1) Lus10014614 [exp] 423 / 3e-143 AT5G40760 782 / 0.0 glucose-6-phosphate dehydrogenase 6 (.1) Lus10012339 [exp] 150 / 3e-43 AT5G35790 181 / 5e-56 glucose-6-phosphate dehydrogenase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0063 [poplar] [flax] NADP_Rossmann PF00479 [poplar] [flax] G6PD_N Glucose-6-phosphate dehydrogenase, NAD binding domain CL0139 [poplar] [flax] GADPH_aa-bio_dh PF02781 [poplar] [flax] G6PD_C Glucose-6-phosphate dehydrogenase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.001G059900.1 pacid=42789270 polypeptide=Potri.001G059900.1.p locus=Potri.001G059900 ID=Potri.001G059900.1.v4.1 annot-version=v4.1 ATGGCTACCCTTTATTCGACGACATGTCGTTCCATTTCATATTCTCTAACACCATCTTCTTCTTCTTCTTCTTCACTATCAATTAACGGGCAGAATCACC ATCAACGACTAAACTTCTCTTCTTGTATTGCTAAAAGGGTTTTACCTGTTAAGGTCTCTTTTCATTCTCGAAGAAATTTTCATTTAAATGTGGTTCTCAT GCAAGATGGTGCAGTGGCCACTCCAGTGACCCCAGTTGAAAATGAGACTCCTTTTAAGAAATTGAAAGATGGGTTCTTGTCTTCAGTTCCATCAACTGAG GAAATTAAAGAAGCAGCTAGTTTTGATGTAAATAAAGATGAGTCGACTGTCAGTATCACTGTGGTTGGAGCATCTGGTGACCTTGCAAAGAAAAAGATAT TTCCTGCACTTTTTGCTCTTTATTATGAGGGTTGTCTCCCGGAGCATTTTACTATCTTTGGTTATGCTCGGAGCAAGATGACTGATGCTGAACTTAGAAA CATGGTTAGCAAGACCCTTACTTGCAGAATTGATAAGAGGGAGAACTGTGATGAAAAGATGGACCAATTTCTTAAGAGATGTTTCTACCATTCTGGTCAA TACGGTTCTCAGGAAAACTTTGCGGAGTTAGACAAGAAGCTGAAAGAACATGAGGGTGCGAGAGTTTCTAATCGCCTCTTCTATCTATCAATTCCTCCAA ATATATTTATAGAAGCGGTAAAATGTGCAAGCTCATCAGCTTCATCTGGTATTGGCTGGACCAGGGTCATTGTTGAGAAACCCTTTGGCCGAGATTCAGA TTCATCGGCTGCTTTGACAAAAGCTCTCAAGCAATACCTTGATGAAGATCAAATATTCAGGATAGACCATTATCTGGGAAAGGAGCTTGTGGAAAACCTG TCTGTTCTGCGCTTCTCTAATCTCATTTTTGAACCCTTGTGGTCAAGGCAATATATCAGAAACGTACAGTTGATATTCTCTGAAGATTTTGGCACTGAAG GACGTGGAGGGTACTTTGACAATTACGGAATAATAAGAGACATAATGCAGAACCATCTGCTTCAAATACTAGCCCTCTTTGCGATGGAAACACCTGTCAG TTTGGATGCAGAAGACATCAGAAACGAAAAGGTCAAAGTTTTAAGATCAATGAGGCCTTTACAACTCGAAGATGTTGTTGTTGGGCAGTACAAGAATCAC ACAAAAGGAGGAGTTACTTACCCAGCATACACTGATGACAACACTGTACCAAAAGGCAGCTTAACTCCAACATTTGCTGCAGCCGCTCTCTTCATAGACA ATGCAAGATGGGATGGAGTGCCTTTTCTAATGAAAGCTGGCAAAGCATTGCATAATAAGAGTGCCGAGATAAGGGTACAGTTCAGGCATGTGCCTGGCAA CTTATACAACCGGAATTTTGGAACGGATCTTGATCGGGCTACAAACGAGCTTGTTATTCGAGTGCAACCAGATGAAGCTATCTATCTGAAGATCAATAAC AAGGTTCCTGGATTGGGAATGAGATTGGACCGTAGCAATCTACATCTTCACTACGCAGCAAGATATTCAAAAGAGATTCCAGATGCATACGAGAGGCTTC TGCTGGATGCAATTGAAGGCGAAAGGAGATTGTTTATCAGGAGTGATGAACTGGATGCAGCATGGGCACTCTTCACTCCTGTTCTTAAGGAGCTTGAAGA GAAGAAGATCATCCCCGAATATTATCCTTATGGTAGTCGGGGCCCTGTTGGGGCTCACTATCTTGCAGCAAGATACAAAGTCAGATGGGGCGACCTTGGT ATAGAGCAATAA
AA sequence Show only first row Show all	>Potri.001G059900.1 pacid=42789270 polypeptide=Potri.001G059900.1.p locus=Potri.001G059900 ID=Potri.001G059900.1.v4.1 annot-version=v4.1 MATLYSTTCRSISYSLTPSSSSSSSLSINGQNHHQRLNFSSCIAKRVLPVKVSFHSRRNFHLNVVLMQDGAVATPVTPVENETPFKKLKDGFLSSVPSTE EIKEAASFDVNKDESTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCDEKMDQFLKRCFYHSGQ YGSQENFAELDKKLKEHEGARVSNRLFYLSIPPNIFIEAVKCASSSASSGIGWTRVIVEKPFGRDSDSSAALTKALKQYLDEDQIFRIDHYLGKELVENL SVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVVGQYKNH TKGGVTYPAYTDDNTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHNKSAEIRVQFRHVPGNLYNRNFGTDLDRATNELVIRVQPDEAIYLKINN KVPGLGMRLDRSNLHLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPVLKELEEKKIIPEYYPYGSRGPVGAHYLAARYKVRWGDLG IEQ

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G13110		G6PD2	glucose-6-phosphate dehydrogen...		Potri.001G059900 [exp]	0	1	G6PD.2
AT1G63940		MDAR6	monodehydroascorbate reductase...		Potri.001G099600 [exp]	6.63	0.6333
AT2G40200	bHLH	bHLH051	basic helix-loop-helix (bHLH) ...		Potri.008G070800 [exp]	8.83	0.6312
AT1G74150			Galactose oxidase/kelch repeat...		Potri.013G008200 [exp]	12.24	0.6667
AT3G27530		MAG4, GC6	MAIGO 4, golgin candidate 6 (....		Potri.001G343500 [exp]	15.29	0.6398
					Potri.014G044700 [exp]	34.81	0.6331
AT2G27510		ATFD3	ferredoxin 3 (.1)		Potri.009G163800 [exp]	40.65	0.5659
AT1G77460			Armadillo/beta-catenin-like re...		Potri.005G180100 [exp]	42.52	0.6281
AT5G07050			nodulin MtN21 /EamA-like trans...		Potri.011G148400 [exp]	43.39	0.6479
AT5G65550			UDP-Glycosyltransferase superf...		Potri.008G024900 [exp]	49.09	0.6368
AT1G60890			Phosphatidylinositol-4-phospha...		Potri.001G211200 [exp]	60.39	0.6004

Compare expression of checked genes

Potri.001G059900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.