Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP51.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11680 865 / 0 EMB1738, CYP51A2, CYP51G1 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) AT3G19270 125 / 3e-31 CYP707A4 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) AT5G45340 118 / 1e-28 CYP707A3 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) AT4G19230 114 / 2e-27 CYP707A1 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) AT3G61040 111 / 4e-26 CYP76C7 "cytochrome P450, family 76, subfamily C, polypeptide 7", cytochrome P450, family 76, subfamily C, polypeptide 7 (.1.2) AT1G05160 107 / 6e-25 ATKAO1, CYP88A3 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) AT1G12740 103 / 1e-23 CYP87A2 "cytochrome P450, family 87, subfamily A, polypeptide 2", cytochrome P450, family 87, subfamily A, polypeptide 2 (.1.2) AT3G10560 101 / 9e-23 CYP77A7, UNE9 UNFERTILIZED EMBRYO SAC 9, CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 7, Cytochrome P450 superfamily protein (.1) AT2G29090 101 / 9e-23 CYP707A2 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) AT1G78490 100 / 1e-22 CYP708A3 "cytochrome P450, family 708, subfamily A, polypeptide 3", cytochrome P450, family 708, subfamily A, polypeptide 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G161700 [exp] 967 / 0 AT1G11680 828 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Potri.014G029100 [exp] 133 / 7e-34 AT3G19270 665 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.002G126100 [exp] 127 / 8e-32 AT3G19270 666 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.004G140900 [exp] 123 / 3e-30 AT3G19270 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.012G115000 [exp] 121 / 1e-29 AT5G36110 295 / 7e-95 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1) Potri.004G235400 [exp] 119 / 5e-29 AT4G19230 778 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Potri.009G101700 [exp] 118 / 1e-28 AT3G19270 711 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.014G179100 [exp] 117 / 3e-28 AT1G05160 741 / 0.0 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) Potri.013G106200 [exp] 114 / 4e-27 AT5G36110 492 / 2e-171 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001713 [exp] 863 / 0 AT1G11680 852 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Lus10004146 [exp] 857 / 0 AT1G11680 850 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Lus10021725 [exp] 127 / 1e-31 AT3G19270 633 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10042652 [exp] 122 / 7e-30 AT3G19270 647 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10008423 [exp] 115 / 2e-27 AT5G24910 462 / 9e-159 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Lus10021136 [exp] 114 / 7e-27 AT3G52970 436 / 5e-149 "cytochrome P450, family 76, subfamily G, polypeptide 1", cytochrome P450, family 76, subfamily G, polypeptide 1 (.1.2) Lus10025749 [exp] 112 / 2e-26 AT3G52970 441 / 9e-151 "cytochrome P450, family 76, subfamily G, polypeptide 1", cytochrome P450, family 76, subfamily G, polypeptide 1 (.1.2) Lus10035685 [exp] 111 / 2e-26 AT4G19230 714 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Lus10012675 [exp] 108 / 4e-25 AT3G19270 586 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10033308 [exp] 106 / 1e-24 AT5G45340 732 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.001G068400.1 pacid=42787769 polypeptide=Potri.001G068400.1.p locus=Potri.001G068400 ID=Potri.001G068400.1.v4.1 annot-version=v4.1 ATGACTGGAGATACGGATAACAAGTTCTTGAATGTGGGTCTACTCATTATAGCCACTCTACTGGTGGCCAAGCTCATCTCTGCACTTATAATGCCTAGAT CTCAAAAGCGCTTGCCTCCTGTTATGAAGGGATGGCCTTTGATTGGAGGGCTCATTCGGTTCCTTAAAGGTCCTATTGTGATGCTTCGCGAAGAGTACCC AAAACTTGGCAGTGTGTTTACTGTGAATTTGGTTAATAGGAAGATTACTTTCTTGATTGGCCCTGAGGTGTCTGCGCATTTCTTCAAGGCTTCGGAAGTG GATTTGAGCCAGCAGGAGGTGTATCAGTTCAATGTGCCTACTTTTGGTCCCGGTGTTGTGTTTGATGTGGAGTACTCCATTAGGCAAGAGCAGTTTCGGT TCTTCACAGAGGCTTTAAGAGTGAACAAACTCAAGGGATATGTGGACCAGATGGTGGTAGAAGCAGAGGATTACTTCTTAAAATGGGGAGACAGTGGGGT GGTAGACTTGAAGTATGAGCTTGAGCATCTGATCATTTTGACAGCCAGTAGATGTCTACTTGGACGAGAAGTGCGTGATAAGCTTTTTGATGACGTGGCT GCTCTATTCCATGACCTTGACAATGGAATGCTCCCAGTTAGTGTTTTATTCCCATACTTGCCCATCCCGGCTCATCGCCGCCGTGACCGGGCACGCAAGA AGCTTGCAGAAATCTTTGCAAATATCATAAATTCTCGTAAGCTTGCCAGCAAATCAGAGAATGACATGTTGCAGTGCTTCATTGATTCAAAGTATAAAGA TGGTCGCCCAACAACTGAGTCTGAGATCACAGGCTTGCTCATTGCTGCTCTCTTTGCTGGGCAGCACACCAGTTCCATCACCTCTACATGGACCGGAGCC TATCTTCTGCGACACAATGAATACCTATCTGCTGTACTGGAGGAGCAGAAGAACCTGATGAAAAAGCACGGGAACAAGGTTGATCATGATATTTTATCCG AGATGGATGTCCTGTATCGGTGCATCAAGGAAGCCCTTAGACTCCATCCTCCACTAATTATGCTTCTACGGAGCTCACACAGTGACTTCAGTGTGACAAC ACGAGATGGGAAAGAATATGACATCCCAAAGGGCCACATTGTCGCAACATCTCCTGCATTTGCTAACCGGCTTCCTCATGTCTTCAAGGACCCAGATAGC TATGATCCCGACAGATTTGCTTATGGGAGAGAAGAAGACAAAGCAGCAGGGGCATTTTCATATATTTCTTTTGGAGGTGGCAGGCACGGGTGCCTCGGTG AACCATTTGCTTACTTGCAGATAAAAGCGATATGGAGTCATTTGCTGAGGAATTTTGAACTGGAGCTCATATCTCCTTTCCCTGAGATAGACTGGAATGC AATGGTCGTTGGTGTGAAAGACAAGGTAATGGTGCGTTACAAGCGGCGTGAGCTTTCAGTAAATTAG
AA sequence Show only first row Show all	>Potri.001G068400.1 pacid=42787769 polypeptide=Potri.001G068400.1.p locus=Potri.001G068400 ID=Potri.001G068400.1.v4.1 annot-version=v4.1 MTGDTDNKFLNVGLLIIATLLVAKLISALIMPRSQKRLPPVMKGWPLIGGLIRFLKGPIVMLREEYPKLGSVFTVNLVNRKITFLIGPEVSAHFFKASEV DLSQQEVYQFNVPTFGPGVVFDVEYSIRQEQFRFFTEALRVNKLKGYVDQMVVEAEDYFLKWGDSGVVDLKYELEHLIILTASRCLLGREVRDKLFDDVA ALFHDLDNGMLPVSVLFPYLPIPAHRRRDRARKKLAEIFANIINSRKLASKSENDMLQCFIDSKYKDGRPTTESEITGLLIAALFAGQHTSSITSTWTGA YLLRHNEYLSAVLEEQKNLMKKHGNKVDHDILSEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVTTRDGKEYDIPKGHIVATSPAFANRLPHVFKDPDS YDPDRFAYGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFELELISPFPEIDWNAMVVGVKDKVMVRYKRRELSVN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G11680		EMB1738, CYP51A...	embryo defective 1738, CYTOCHR...		Potri.001G068400 [exp]	0	1	CYP51.2
AT2G23380		SET1, SDG1, ICU...	SETDOMAIN 1, SETDOMAIN GROUP 1...		Potri.007G045800 [exp]	2.00	0.9386	Pt-CLF.1
AT1G04040			HAD superfamily, subfamily III...		Potri.002G257700 [exp]	2.64	0.9475
AT5G62865			unknown protein		Potri.012G078300 [exp]	2.64	0.9232
AT5G56590			O-Glycosyl hydrolases family 1...		Potri.005G253900 [exp]	3.00	0.9221
AT2G44190		EMB3116, EDE1, ...	QWRF domain containing 5, EMBR...		Potri.016G000300 [exp]	3.16	0.9344
AT1G51600	GATA	GATA28, TIFY2A,...	GATA TRANSCRIPTION FACTOR 28, ...		Potri.010G251600 [exp]	3.16	0.9182	ZML1.1
AT4G10390			Protein kinase superfamily pro...		Potri.011G147100 [exp]	3.60	0.9157
AT3G12110		ACT11	actin-11 (.1)		Potri.006G192700 [exp]	3.74	0.9419	Pt-ACT2.4
AT5G66920		SKS17	SKU5 similar 17 (.1)		Potri.007G038300 [exp]	5.19	0.9418
AT5G50350			unknown protein		Potri.010G247100 [exp]	5.47	0.9048

Compare expression of checked genes

Potri.001G068400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.