Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ATGSTT1.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G41210 359 / 9e-127 GSTU12, GST10, ATGSTT1 glutathione S-transferase THETA 1 (.1) AT5G41240 355 / 2e-120 GST10B, ATGSTT2 glutathione S-transferase THETA 2 (.1) AT5G41220 343 / 1e-115 GST10C, ATGSTT3 glutathione S-transferase THETA 3 (.1) AT2G30870 77 / 6e-17 ERD13, ATGSTF4, ATGSTF10 EARLY DEHYDRATION-INDUCED 13, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 10, glutathione S-transferase PHI 10 (.1) AT2G30860 70 / 2e-14 GLUTTR, ATGSTF7, ATGSTF9 glutathione S-transferase PHI 9 (.1.2) AT3G03190 69 / 7e-14 ATGSTF6, ATGSTF11 ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, glutathione S-transferase F11 (.1) AT1G49860 62 / 2e-11 ATGSTF14 glutathione S-transferase (class phi) 14 (.1) AT1G02920 58 / 5e-10 ATGST11, GST11, ATGSTF8, ATGSTF7 ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 11, glutathione S-transferase 7 (.1) AT2G02930 57 / 7e-10 GST16, ATGSTF3 GLUTATHIONE S-TRANSFERASE 16, glutathione S-transferase F3 (.1) AT5G17220 57 / 9e-10 GST26, TT19, ATGSTF12 TRANSPARENT TESTA 19, GLUTATHIONE S-TRANSFERASE 26, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, glutathione S-transferase phi 12 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G125800 [exp] 369 / 9e-131 AT5G41210 327 / 2e-114 glutathione S-transferase THETA 1 (.1) Potri.004G232600 [exp] 63 / 9e-12 AT2G02390 306 / 2e-106 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Potri.017G138800 [exp] 62 / 2e-11 AT5G17220 265 / 1e-90 TRANSPARENT TESTA 19, GLUTATHIONE S-TRANSFERASE 26, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, glutathione S-transferase phi 12 (.1) Potri.002G207286 [exp] 59 / 2e-10 AT1G02930 263 / 4e-90 EARLY RESPONSIVE TO DEHYDRATION 11, ARABIDOPSIS THALIANA GLUATIONE S-TRANSFERASE F3, ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 1, glutathione S-transferase 6 (.1.2) Potri.002G207479 [exp] 59 / 2e-10 AT1G02930 267 / 1e-91 EARLY RESPONSIVE TO DEHYDRATION 11, ARABIDOPSIS THALIANA GLUATIONE S-TRANSFERASE F3, ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 1, glutathione S-transferase 6 (.1.2) Potri.002G207672 [exp] 59 / 3e-10 AT3G62760 302 / 2e-105 Glutathione S-transferase family protein (.1) Potri.002G207093 [exp] 55 / 6e-09 AT1G02930 263 / 5e-90 EARLY RESPONSIVE TO DEHYDRATION 11, ARABIDOPSIS THALIANA GLUATIONE S-TRANSFERASE F3, ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 1, glutathione S-transferase 6 (.1.2) Potri.014G132200 [exp] 54 / 2e-08 AT3G62760 295 / 2e-102 Glutathione S-transferase family protein (.1) Potri.002G015100 [exp] 50 / 3e-07 AT3G03190 196 / 2e-63 ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, glutathione S-transferase F11 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000606 [exp] 392 / 5e-140 AT5G41240 351 / 1e-123 glutathione S-transferase THETA 2 (.1) Lus10008021 [exp] 386 / 2e-137 AT5G41210 348 / 1e-122 glutathione S-transferase THETA 1 (.1) Lus10008308 [exp] 383 / 5e-136 AT5G41210 347 / 4e-122 glutathione S-transferase THETA 1 (.1) Lus10008020 [exp] 176 / 6e-55 AT5G41210 174 / 4e-54 glutathione S-transferase THETA 1 (.1) Lus10026643 [exp] 68 / 1e-13 AT2G47730 269 / 2e-91 Arabidopsis thaliana glutathione S-transferase phi 8, GLUTATHIONE S-TRANSFERASE \(CLASS PHI\) 5, glutathione S-transferase phi 8 (.1) Lus10004151 [exp] 67 / 2e-13 AT2G30860 194 / 1e-62 glutathione S-transferase PHI 9 (.1.2) Lus10030414 [exp] 66 / 8e-13 AT2G47730 267 / 1e-90 Arabidopsis thaliana glutathione S-transferase phi 8, GLUTATHIONE S-TRANSFERASE \(CLASS PHI\) 5, glutathione S-transferase phi 8 (.1) Lus10020519 [exp] 62 / 3e-11 AT2G02390 283 / 2e-97 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10005367 [exp] 61 / 4e-11 AT2G02390 284 / 4e-98 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10005634 [exp] 59 / 2e-10 AT2G30860 177 / 1e-55 glutathione S-transferase PHI 9 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [poplar] [flax] Thioredoxin PF02798 [poplar] [flax] GST_N Glutathione S-transferase, N-terminal domain CL0497 [poplar] [flax] GST_C PF14497 [poplar] [flax] GST_C_3 Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.001G105600.1 pacid=42789416 polypeptide=Potri.001G105600.1.p locus=Potri.001G105600 ID=Potri.001G105600.1.v4.1 annot-version=v4.1 ATGAAGCTGAAAGTATACGCAGACAGAATGTCACAGCCATCACGGGCTGTTCTCATCTTCTGCAAGGTAAACAGGATAGACTTTGAAGAGGTTAGAGTTG ACATATCAAAGCGCCAGCATTTAACTCCTGAATTCAAAGAGATAAACCCTATGAGAAAATTGCCAGCTATAGTTGATGGAAGGTTCAAGCTGTTTGAGAG TCACGCGATCTTAATTTATCTTGCTTGTGTATTTCCGGGAGTTGCTGATCACTGGTACCCAGCGGATCTTTTCAAAAGAGCTAAAATCAACTCGGTTTTG GATTGGCATCACTCCAACTTACGCCGTGGTGCAGCTGAATATGTCAAGAATACCACATTAGCACCTGTCCTTGGTCTACCTCTGGATCCACAAGCAGCTG CTGAGGCCGAGAAAGTTCTATTTTCATCCCTGTCAAAGATAGAGTCTGTGTGGCTTAAGGGAAGTGGCCGGTTCTTGTTAGGTGGAAATCAACCATCCAT AGCTGATCTAAGCCTAGTTTGTGAACTAATGCAACTGGAGGTTTTGGATGAAAAGGATTGCAGCCGAATACTTTGCCCCTACAAGAAGGTTCAGCAGTGG ATGGAGGATACAAAAAATGCAACAAGGCCACACTTTGATAAAGTGCATCAAATCTTGTTCAAAGCCAAAGTGAAACTGCAGAAGGTACGGTCAATGAGCA CAAACAGTGAGAACTTGAAAACAAAATTGGCCTCAAAGATGTAA
AA sequence Show only first row Show all	>Potri.001G105600.1 pacid=42789416 polypeptide=Potri.001G105600.1.p locus=Potri.001G105600 ID=Potri.001G105600.1.v4.1 annot-version=v4.1 MKLKVYADRMSQPSRAVLIFCKVNRIDFEEVRVDISKRQHLTPEFKEINPMRKLPAIVDGRFKLFESHAILIYLACVFPGVADHWYPADLFKRAKINSVL DWHHSNLRRGAAEYVKNTTLAPVLGLPLDPQAAAEAEKVLFSSLSKIESVWLKGSGRFLLGGNQPSIADLSLVCELMQLEVLDEKDCSRILCPYKKVQQW MEDTKNATRPHFDKVHQILFKAKVKLQKVRSMSTNSENLKTKLASKM

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G41210		GSTU12, GST10, ...	glutathione S-transferase THET...		Potri.001G105600 [exp]	0	1	ATGSTT1.3
AT4G30310			FGGY family of carbohydrate ki...		Potri.018G095700 [exp]	6.00	0.7330
AT5G08530		CI51	51 kDa subunit of complex I (....		Potri.010G057400 [exp]	6.00	0.7475
AT1G17200			Uncharacterised protein family...		Potri.001G436400 [exp]	8.83	0.7524
AT4G04210		PUX4	plant UBX domain containing pr...		Potri.011G011300 [exp]	9.21	0.7473
AT3G61200			Thioesterase superfamily prote...		Potri.014G078900 [exp]	12.40	0.6905
AT1G53750		RPT1A	regulatory particle triple-A 1...		Potri.006G216600 [exp]	13.56	0.7717	RPT1.5
AT2G43060	bHLH	AtIBH1, bHLH158	ILI1 binding bHLH 1 (.1)		Potri.002G232500 [exp]	15.19	0.6787
AT5G03290		IDH-V	isocitrate dehydrogenase V (.1...		Potri.006G126700 [exp]	17.43	0.6955
AT1G25682			Family of unknown function (DU...		Potri.008G115700 [exp]	18.65	0.6837
AT4G18700		ATWL4, CIPK12, ...	SNF1-RELATED PROTEIN KINASE 3....		Potri.011G067600 [exp]	20.97	0.6722

Compare expression of checked genes

Potri.001G105600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.