Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	GF14.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G42590 283 / 7e-97 GENERALREGULATORYFACTOR9, GF14MU, GRF9 general regulatory factor 9 (.1.2.3) AT1G34760 274 / 2e-93 RHS5, GF14OMICRON, GRF11 ROOT HAIR SPECIFIC 5, general regulatory factor 11 (.1.2) AT1G26480 270 / 2e-91 GF14IOTA, GRF12 general regulatory factor 12 (.1) AT1G22300 265 / 2e-89 14-3-3EPSILON, GF14EPSILON, GRF10 14-3-3 PROTEIN G-BOX FACTOR14 EPSILON, general regulatory factor 10 (.1.2.3) AT5G38480 246 / 2e-82 RCI1, GRF3 general regulatory factor 3 (.1.2) AT3G02520 244 / 4e-81 GENERALREGULATORYFACTOR7, GF14NU, GRF7 general regulatory factor 7 (.1) AT1G35160 236 / 3e-78 14-3-3PHI, GF14PHI, GRF4 ,GF14 PHI GENERAL REGULATORY FACTOR 4, 14-3-3 PROTEIN G-BOX FACTOR14 PHI, GF14 protein phi chain (.1.2) AT1G78300 236 / 3e-78 14-3-3OMEGA, GF14OMEGA, GRF2 14-3-3 PROTEIN G-BOX FACTOR14 OMEGA, general regulatory factor 2 (.1) AT4G09000 234 / 2e-77 GF14CHI, GRF1 GENERAL REGULATORY FACTOR1-G-BOX FACTOR 14-3-3 HOMOLOG ISOFORM CHI, general regulatory factor 1 (.1.2) AT5G65430 234 / 2e-77 14-3-3KAPPA, GF14KAPPA, GRF8 14-3-3 PROTEIN G-BOX FACTOR14 KAPPA, general regulatory factor 8 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G110900 [exp] 302 / 4e-104 AT2G42590 424 / 4e-152 general regulatory factor 9 (.1.2.3) Potri.001G392200 [exp] 295 / 3e-101 AT2G42590 428 / 2e-153 general regulatory factor 9 (.1.2.3) Potri.002G097500 [exp] 284 / 3e-97 AT1G26480 419 / 4e-150 general regulatory factor 12 (.1) Potri.005G164500 [exp] 280 / 8e-96 AT1G34760 417 / 3e-149 ROOT HAIR SPECIFIC 5, general regulatory factor 11 (.1.2) Potri.008G095000 [exp] 273 / 1e-92 AT1G26480 440 / 3e-158 general regulatory factor 12 (.1) Potri.010G159300 [exp] 265 / 1e-89 AT1G26480 466 / 2e-168 general regulatory factor 12 (.1) Potri.017G113300 [exp] 248 / 4e-83 AT3G02520 468 / 2e-169 general regulatory factor 7 (.1) Potri.004G101700 [exp] 247 / 2e-82 AT3G02520 472 / 5e-171 general regulatory factor 7 (.1) Potri.002G099800 [exp] 241 / 2e-80 AT1G78300 473 / 3e-171 14-3-3 PROTEIN G-BOX FACTOR14 OMEGA, general regulatory factor 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017650 [exp] 288 / 1e-98 AT2G42590 420 / 5e-150 general regulatory factor 9 (.1.2.3) Lus10029835 [exp] 286 / 1e-97 AT2G42590 417 / 1e-148 general regulatory factor 9 (.1.2.3) Lus10020705 [exp] 285 / 5e-97 AT2G42590 399 / 2e-141 general regulatory factor 9 (.1.2.3) Lus10001894 [exp] 280 / 2e-95 AT2G42590 405 / 1e-144 general regulatory factor 9 (.1.2.3) Lus10033609 [exp] 280 / 4e-93 AT2G42590 410 / 9e-144 general regulatory factor 9 (.1.2.3) Lus10013908 [exp] 277 / 6e-92 AT2G42590 400 / 1e-139 general regulatory factor 9 (.1.2.3) Lus10036896 [exp] 270 / 3e-91 AT1G26480 462 / 5e-167 general regulatory factor 12 (.1) Lus10004652 [exp] 266 / 6e-90 AT1G26480 457 / 4e-165 general regulatory factor 12 (.1) Lus10026660 [exp] 263 / 7e-89 AT1G26480 457 / 7e-165 general regulatory factor 12 (.1) Lus10036471 [exp] 258 / 8e-87 AT1G26480 406 / 7e-145 general regulatory factor 12 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00244 [poplar] [flax] 14-3-3 14-3-3 protein
Representative CDS sequence Show only first row Show all	>Potri.001G125600.1 pacid=42790526 polypeptide=Potri.001G125600.1.p locus=Potri.001G125600 ID=Potri.001G125600.1.v4.1 annot-version=v4.1 ATGGATGTACGTCAAAATTCAGTGTATTCTGCCAAACTTGCTGAACAGGCGAAACGCTACAATGAGATGTTGGATCACATGAAGTATATTGCAAAGCTTG ACGTTGAGTTGACAACCGAGGAGCGGAATTTGCTGCGTATTGGATGCAAGAATGTAATGGGCCCAAGAAGAGAATCATGGAGAATGCTTTCATCCATAGA GGAAAAGGAACAAGCCAAAGGGAACCAAGTTAATGCGAAGAGGATCGAGGAGTATAGACGGAAGGTTGAGTCCGAACTCACAAGTATATGCAACGATATC ATACAATTGATTGATGATCATCTACTCCCTTCAACTTCCCAGTGTGAATCCTGTGTCTTCTATCATAGGATGAAGGGAGATTATTACAGGTATCTAGCAG AATTCAAGGTTGGCATCGAGATGGAGAAGGCTGCTTCAGAGTCAATGAAAGCATATGATATAGGCATTAAAGCTGCATCCAAGTTGGCTCCTACAAATTT AGTTCGATTGAGTTTGGCTTTGAATTTCTCAGTGTTATTGTATGATATCATGAAGTTTCCTGAGAAGGCTTTCTTTCATGCTAAGAATGCTTATGATGAG GCTATCCCAATACTCGACAATTTGAATAAGGAATCACAGAAAGACAGCATGTTGATATTGGAGATTCTTCTAGACAACGTCAGGTTGTGGAGTTATGACA TCTTAGAGAATTGA
AA sequence Show only first row Show all	>Potri.001G125600.1 pacid=42790526 polypeptide=Potri.001G125600.1.p locus=Potri.001G125600 ID=Potri.001G125600.1.v4.1 annot-version=v4.1 MDVRQNSVYSAKLAEQAKRYNEMLDHMKYIAKLDVELTTEERNLLRIGCKNVMGPRRESWRMLSSIEEKEQAKGNQVNAKRIEEYRRKVESELTSICNDI IQLIDDHLLPSTSQCESCVFYHRMKGDYYRYLAEFKVGIEMEKAASESMKAYDIGIKAASKLAPTNLVRLSLALNFSVLLYDIMKFPEKAFFHAKNAYDE AIPILDNLNKESQKDSMLILEILLDNVRLWSYDILEN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G42590		GENERALREGULATO...	general regulatory factor 9 (....		Potri.001G125600 [exp]	0	1	GF14.2
					Potri.005G022200 [exp]	2.44	0.5448
AT3G23130	C2H2ZnF	FLO10, FON1, SU...	SUPERMAN, FLORAL ORGAN NUMBER ...		Potri.010G074500 [exp]	12.56	0.5393	FLO10.1
AT5G44265			Bifunctional inhibitor/lipid-t...		Potri.002G012300 [exp]	17.88	0.5276
					Potri.011G164750 [exp]	28.33	0.4204
					Potri.004G151301 [exp]	34.39	0.4165
AT5G28780			PIF1 helicase (.1)		Potri.012G073100 [exp]	51.65	0.3953
AT5G12000			Protein kinase protein with ad...		Potri.006G225300 [exp]	58.58	0.4169
AT1G28510			Optic atrophy 3 protein (OPA3)...		Potri.019G092900 [exp]	60.27	0.3995
AT1G14200			RING/U-box superfamily protein...		Potri.011G119900 [exp]	64.69	0.3826
AT1G54560		PCR1, ATXIE, XI...	MYOSIN XI E, Myosin family pro...		Potri.019G013800 [exp]	72.00	0.3573

Compare expression of checked genes

Potri.001G125600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.