Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ATBI.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47120 311 / 1e-107 ATBI-1, ATBI1 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) AT4G17580 188 / 2e-59 Bax inhibitor-1 family protein (.1) AT5G47130 116 / 3e-32 Bax inhibitor-1 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G082700 [exp] 342 / 8e-120 AT5G47120 300 / 3e-103 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011006 [exp] 302 / 1e-103 AT5G47120 333 / 5e-116 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Lus10000589 [exp] 301 / 1e-103 AT5G47120 339 / 2e-118 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Lus10000097 [exp] 202 / 2e-65 AT5G47120 226 / 5e-75 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0453 [poplar] [flax] Apoptosis-Inhib PF01027 [poplar] [flax] Bax1-I Inhibitor of apoptosis-promoting Bax1
Representative CDS sequence Show only first row Show all	>Potri.001G151800.2 pacid=42787662 polypeptide=Potri.001G151800.2.p locus=Potri.001G151800 ID=Potri.001G151800.2.v4.1 annot-version=v4.1 ATGGACGCCTTCGCTTCCTTCTTTGACTCTCAATCGGCTTCAAGGAACCGTTGGAGCTACGATTCTCTCAAGAACTTACGCCAGATCTCTCCTCTTGTCC AGAACCATCTCAAGCAGGTTTATCTGACCTTATGTTGTGCACTGGTTGCATCTGCCGCTGGGGCATACCTCCATATTCTGTGGAATATTGGTGGTCTCTT AACGACTATCGCATGCTTTGGATGCATGGCTTGGCTACTTTCCATATCTCCTTATGAAGAGCAAAAGAGGGTTGCTCTCTTGATGGCAACTGCACTCCTC GAAGGGGCTTCTATCGGTCCTCTGATTGATCTGGCCATTCAGATTGATCCAAGTGTTCTGATTACAGCTTTTGTGGGAACTGCGGTGGCCTTTGGATGTT TCTCAGTAGCAGCTATGTTGGCTAGGCGTAGAGAATATCTTTACTTGGGTGGCTTGCTTTCATCTGGCCTTTCCATCCTTCTATGGCTGCACTTTGCATC CTCCATCTTTGGGGGATCTGCAGCCCTCTTTAAATTTGAGCTGTACTTTGGGCTTCTGGTGTTTGTGGGCTATGTGGTAGTTGACACCCAGGATATCATT GAGAAAGCTCACCTTGGTGATCTGGACTATGTGAAGCATTCCCTGAGCCTTTTCACCGACTTCGTTGCTGTTTTTGTCCGAATTCTCATAATCATGTTGA AGAATTCAACTGAGAAGGAGAAGAAGAAGAAGAGAAGAGATTGA
AA sequence Show only first row Show all	>Potri.001G151800.2 pacid=42787662 polypeptide=Potri.001G151800.2.p locus=Potri.001G151800 ID=Potri.001G151800.2.v4.1 annot-version=v4.1 MDAFASFFDSQSASRNRWSYDSLKNLRQISPLVQNHLKQVYLTLCCALVASAAGAYLHILWNIGGLLTTIACFGCMAWLLSISPYEEQKRVALLMATALL EGASIGPLIDLAIQIDPSVLITAFVGTAVAFGCFSVAAMLARRREYLYLGGLLSSGLSILLWLHFASSIFGGSAALFKFELYFGLLVFVGYVVVDTQDII EKAHLGDLDYVKHSLSLFTDFVAVFVRILIIMLKNSTEKEKKKKRRD

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G47120		ATBI-1, ATBI1	ARABIDOPSIS BAX INHIBITOR 1, B...		Potri.001G151800 [exp]	0	1	ATBI.1
AT5G19860			Protein of unknown function, D...		Potri.003G217200 [exp]	1.00	0.8563
AT1G67360			Rubber elongation factor prote...		Potri.001G055300 [exp]	3.46	0.8013
AT1G21860		SKS7	SKU5 similar 7 (.1)		Potri.010G229500 [exp]	7.14	0.8135
AT2G25355			PNAS-3 related (.1.2)		Potri.015G075400 [exp]	8.36	0.7982
AT4G15470			Bax inhibitor-1 family protein...		Potri.008G199200 [exp]	8.60	0.8221
AT1G07400			HSP20-like chaperones superfam...		Potri.018G140600 [exp]	10.95	0.7991	Pt-HSP17.2
AT3G10480	NAC	ANAC050	NAC domain containing protein ...		Potri.013G079700 [exp]	11.53	0.7520	NAC152
AT3G05010			Protein of unknown function, t...		Potri.005G044700 [exp]	11.83	0.7993
AT3G13570		SCL30A, At-SCL3...	SC35-like splicing factor 30A ...		Potri.016G062500 [exp]	14.00	0.7623
AT5G39890			Protein of unknown function (D...		Potri.004G129400 [exp]	15.65	0.7292

Compare expression of checked genes

Potri.001G151800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.