Potri.001G163200 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G163200.4 pacid=42792297 polypeptide=Potri.001G163200.4.p locus=Potri.001G163200 ID=Potri.001G163200.4.v4.1 annot-version=v4.1
ATGAAACCTTCCGGCAAGACGTTTTCTGAGCTAATTTGCCTTTTGAAATCCTGGATCCCTTGGCGCTCTGAGCCAGCTAGCGTGTCAAGGGATTTTTGGA
TGCCCGATCAGAGTTGTAGGGTATGCTACGAGTGTGATTCTCAATTTACAATATTTAACCGCAGACATCATTGTCGACTTTGTGGCCGAGTTTTCTGTGC
CAAGTGTACAACCAACTCAGTTCCTGTTCCATCAAGTGATCCGAGGACTGTTCAGGAAGACTTGGAGAAGATTCGGGTATGTAATTATTGTTCCAAGCAA
TGGCAGCAAGGTTTAGCTACTTTTGATAATGGAATACAGATTCCCAGCCTAGATCTTAGTAGTTCACCTTCTGCAGCAAGTTTTATCAGCACTAGATCTT
GTGGCACAGCTAACAGTAGTAGCATAACCGGTGGTTCATTGCCATACATGGTTCGGCCTAATCGGCAAGCTCAGCATAGTTCACGTCTCAGCCCTCCTCA
AGCAACAGAAATGGAGACCAGTTCTGATAAGCAAGGGGAAGTGGAATCGGCTAGGTGCAAAGACCCTGTTGCTGACATAGAATATAGATCTCCAGACGGA
TATGCATTTTCGGTGAACAGTGCCAGAAGTGATGACGACGACGACGAGTATGGTGCATATCGATCTGATTCTGAAACGAGGCATTCTCCTCAAGTCAATG
ATTACTATCATCAAGTTGAGTTTGATGACATGAGTAATGACGGTGGATCTCACAAGGCTCATCTTGATGGAGAAACTATTGAACCAAAAAGTTCAAGCAG
TTCTCCAATAAGGCACAGTTTTGGTCCACAGAATTTGGAAGGAATGCCACAGCTAAGGAAAATGGATGAACGAGAGATGGATGATGAATGTGAAGTACCG
TCCTCTATGTATACTGGAGAAGATGGTAACACTGAACCTGTGGATTTTGAGAACAGTGGAGTGCTTTGGCTCCCCCCCGAGCCGGAAGATGAAGAAGATG
AGAGGGAAGTTGGTTTATTTGAAGATGATGATGACGATAGGGATGCTGCAGGAGAGTGGGGATATTTACGGGCATCTGGAAGTTTCAGAAGTGGAGAATT
TCATAACAGGGATAGGACAAGCGAGGAGCACAAGAAGGTCATGAAGAATGTGGTTGATGGGCATTTTAGGGCTTTGGTATCTCAGCTATTACAGGTTGAG
AATGTTCCTGTGGGAGATGAAAATGATAAAGAGAGCTGGTTGGAGATCATCACATCTTTGTCATGGGAGGCTGCTACTTTATTAAAGCCAGATATGAGCA
AAGGTGGAGGAATGGATCCTGGTGGATATGTGAAAGTAAAATGCATTGCTTCTGGACGCTGCTGTGAGAGTATGGTGGTCAAAGGTGTTGTTTGTAAGAA
AAATGTTGCTCATCGTCGAATGACTTCAAAAATAGAGAAACCTCGATTATTGATCCTTGGAGGGGCTCTTGAGTACCAGCGAGTTTCTAAGCAGCTGTCA
AGTTTTGATACTCTATTACAGCAGGAAATGGACCATTTGAAGATGGCAGTGGCAAAGATAGATGCACACAACCCTGATGTCCTTTTAGTGGAGAATTCAG
TTTCAAGACATGCACAGGAATACCTTCTTGCTAAAGACATATCTCTTGTTCTGAATATCAAGAAGCCACTTTTAGAACGTATAGCTCGCTGCACAGGTGC
TCAAATAGTCCCTTCAATTGATCATTTATCTTCCCCAAAGTTGGGGTACTGTGAAAAGTTCCATGTGGAGAGGTTTTTGGAAGATCTTGGTACTGCTGGG
CATGGTGGGAAAAAACTGGTGAAGACATTAATGTATTTTGAAGGCTGCCCAAAGCCATTGGGTTTTACTATTTTACTTAGAGGTGCTAATGGGGATGAGT
TGAAGAAAGTGAAACACGTGGTCCAATATGGTGTTTTTGCAGCATATCACTTGGCTTTGGAGACATCTTTTCTTGCTGATGAAGGAGCATCTCTGCCAGA
ACTCCCGTTGAACACTCCAATAACCGTTGCACTTCCAGATAAACCATCAAGCATTGAGAGATCAATATCAACTGTACCTGGTTTCACTATTGCTGCCAAT
GAAAAACCTCAAGGACTGCAATCTAGCAATGAACCACAAAGATCCTATAGCGCCCCTACTGCAAGTCTGGTCTCAACCATCATTGGTTCTTCTGTTGACA
ATGTACCTGCGGCAGATTGTCCCAGCTCTCAATCCTCAGAATCCACTTCATCTCGCTTCAATTCAACTGAATTTCTTTCTGCCGTTCCTTATACTGAGAA
AGCTGTATCAGGTTCTTACCACACATTTGTGGAAAAAACCAAAATGGATTCTGGAGCTTCTCTGGTTGCTGAAATTGCTGCGGCTGATCATCTTACTGCT
AGTGGCTTTGGGTCTTCAGATGGTGTTGCAATGAACTCTTCCCTGAACGATTTCAATGAAATCATCACAACTCAGCCACACAGTTCAGAGGTATCATCTG
CTCAACAAGATTCTAGAAGGAATCTTGAGGAGCCAGAACCTTTAAAAGAAGAGTTTCCTCCATCACCTTCAGATCATCTGAGCATTTTGGTTTCCTTGTC
TTCCCGGTGTGTGTGGAAGGGGACAGTCTGTGAGAGGTCCCATCTCTTCCGCATTAAATACTATGGAAGCTTTGACAAACCTTTGGGTCGGTTTTTGCGA
GACCATTTATTTGATCAGAGTTACAGCTGCCGTTCTTGTGAGATGCCATCAGAAGCACATGTTCATTGTTATACTCACAGGCAAGGAACCCTTACTATAT
CTGTTAAGAAGCTACCTGAAATACTGTTACCAGGTGAACGGGATGGGAAAATTTGGATGTGGCACAGATGTCTGAGGTGTCCACGTATCAATGGTTTTCC
TCCAGCTACTCGGAGAGTAGTAATGTCAGATGCTGCTTGGGGTTTATCTTTTGGGAAATTTTTGGAGCTTAGTTTTTCAAATCATGCAGCTGCAAGCAGG
GTGGCAAGCTGTGGTCATTCTCTTCACAGGGATTGTCTTCGTTTCTATGGTTTCGGGCAAATGGTTGCCTGCTTTCGATATGCGTCAATTAATGTTCTCT
CTGTATACCTTCCTCCCTCGAGAGTTGATTTCAGCTTTGAGAATCAAGAGTGGATGCAGAAAGAAACAGATGAGGTGGTCAATCGGGCAGAACTTCTACT
TTCTGAAGTACTCAATGCTCTTAGTCAAATCTCAGAGAAACGATGTAAGATTGAGCAACTTAACAGTGGCATGAAACTACCTGAATTGAGACGCCAGATA
GCAGAACTTGAATTGATGTTGCAAAAGGAGATGGCGGAATTTGAGGAGTCGCTCCACAAAGTCTTGAGCAGGGAAGTGAAAAACGGGCAACCTGTTATTG
ACATTCTTGAGATCAACAGACTGCGGAGGCAGTTACTCTTCCAGTCTTACATGTGGGACAACCGTCTGATTTATGCAGCCAGTTTAGATAACAGCTTCCA
TGATGATTCAAACAGCTCAACTTCAGGATATGAGGAGAAACTGCTGGAGCCAGATAATAGTGATAGGCTCGTTGAGGAAAACATGGGACACAGGCCAGGA
AATGGTTTCAGTAGCTGTGACTTTCCTTCTGTTGAGGCCAAGCTGCTTAAAGGCTCTGACCAGCAAGGAGGCTTTGGTAGCAACACAAACCTATCTGACA
AGGTTGATCAAGAAATGGATGTGTGTCTAGGCCCTGGTCATGGAAAAGAAGGCCATGCTAATCTTTGCACTACCATGTCTGCCCATGATCTATCTGACAT
TAAGGAATCTGGTGGAAATTTTTTTAGGACCCTTTCTGATGGACAGGTTCCTATTATGGCAAATCTATCGGATACCCTTGATGCTGCATGGACTGGTGAG
AATCACCCTGGAGTTGGGACACTAAAGGACGATAACAATAGGCTTTCTGATTCAGCTATGGAAGAATCTTCAACCACTGCTGTGGGATTGGAGGGGGTAG
ATTTGGAGGGCCGTGCCAAAGACCAAGATGGATCCAAAGTGTGCTATTCTCCTTCACCTGCGTTGTCTGCCAAGGACCCTGATAACATGGAAGATTATAT
GAGCTGGCTAAGAATGCCATTTTTGAATTTCTATCGTTCATTGAACAAGAATTTTCTAACAAGCTCTGAGAAGCTTGGTACTCTGGGTGAGTATAACCCT
GTCTATGTTTCATCCTTCAGGAGTTTGGAACTCCAAGGTGGGGCTAGGCTACTTCTGCCTGTGGGTGTGAACGACACGGTCATTCCTGTGTATGATGATG
AACCCACGAGTCTGATATCTTATGCTTTAGCATCACCAGAATATCATGCCCAACTAACTGATGAGGGGGAAAGAATAAAAGACACTGGAGAATCCAGTTC
TTTCTCAAGTTTATCTGAATCATTCCACTCTCTCGAAGAAGTAAGCCTTGATTTGTATAAAAGTTTTGGATCTACAGATGAGAGCATCTTATCCATGTCT
GGATCACGTAGCTCTTTGATTTTGGACCCACTCTCCTACACAAAGGCTATGCATGTCAAAGTTTCTTTTGGAGATGACAGCCCAGATGGTAAGGCAAGAT
ATTCTGTGACTTGTTACTATGCTAAGCGGTTTGAAACCTTGAGGAGGATATGCTGCCCATCTGAACTTGATTTTGTAAGGTCTCTTAGTCGTTGTAAGAA
GTGGGGAGCTCAAGGTGGCAAGAGCAATGTCTTCTTTGCAAAAACCTTGGATGATCGTTTTATCATCAAACAAGTCACAAAAACAGAATTGGAGTCGTTT
ATAAAATTTGCCCCTGCTTACTTCAAGTACCTCTCTGAATCAATTAGCTCAAGAAGTCCAACATGCCTGGCAAAGATTTTGGGAATTTACCAGGTTACAT
CGAAGAATCTGAAAGGTGGGAAAGAAACGAAGATGGATGTTCTAGTTATGGAGAACCTTCTATATAGGAGGAAAGTGACCCGCCTTTATGATCTTAAAGG
ATCTTCCAGGTCACGGTATAATCCTGATTCTAGTGGGAGCAACAAGGTTCTGCTGGATCAGAACTTGATTGAAGCAATGCCAACCTCTCCCATTTTTGTG
GGAAACAAGTCAAAGCGGCTGCTGGAGAGAGCTGTTTGGAATGATACTTCTTTTCTTGCATCTATTGATGTAATGGATTACTCATTATTGGTTGGGGTTG
ATGAGGAGAAGCATGAGTTGGCTCTTGGGATAATTGATTTCATGAGGCAGTATACATGGGACAAACATTTGGAAACATGGGTTAAGGCTTCAGGCATACT
TGGTGGGCCAAAGAATGAATCTCCAACTGTTATTTCTCCGAAGCAATATAAGAAAAGGTTTAGGAAAGCGATGACTACCTATTTTCTGATGGTCCCAGAT
CAATGGTCCCCTCCCTCTATCATTCCAAGTAAATCCCAGTCTGATTTGGGCGAAGAGAATACACAAGGTGCGGCTTCAGTTGACTGA
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AA sequence
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>Potri.001G163200.4 pacid=42792297 polypeptide=Potri.001G163200.4.p locus=Potri.001G163200 ID=Potri.001G163200.4.v4.1 annot-version=v4.1
MKPSGKTFSELICLLKSWIPWRSEPASVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRLCGRVFCAKCTTNSVPVPSSDPRTVQEDLEKIRVCNYCSKQ
WQQGLATFDNGIQIPSLDLSSSPSAASFISTRSCGTANSSSITGGSLPYMVRPNRQAQHSSRLSPPQATEMETSSDKQGEVESARCKDPVADIEYRSPDG
YAFSVNSARSDDDDDEYGAYRSDSETRHSPQVNDYYHQVEFDDMSNDGGSHKAHLDGETIEPKSSSSSPIRHSFGPQNLEGMPQLRKMDEREMDDECEVP
SSMYTGEDGNTEPVDFENSGVLWLPPEPEDEEDEREVGLFEDDDDDRDAAGEWGYLRASGSFRSGEFHNRDRTSEEHKKVMKNVVDGHFRALVSQLLQVE
NVPVGDENDKESWLEIITSLSWEAATLLKPDMSKGGGMDPGGYVKVKCIASGRCCESMVVKGVVCKKNVAHRRMTSKIEKPRLLILGGALEYQRVSKQLS
SFDTLLQQEMDHLKMAVAKIDAHNPDVLLVENSVSRHAQEYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLSSPKLGYCEKFHVERFLEDLGTAG
HGGKKLVKTLMYFEGCPKPLGFTILLRGANGDELKKVKHVVQYGVFAAYHLALETSFLADEGASLPELPLNTPITVALPDKPSSIERSISTVPGFTIAAN
EKPQGLQSSNEPQRSYSAPTASLVSTIIGSSVDNVPAADCPSSQSSESTSSRFNSTEFLSAVPYTEKAVSGSYHTFVEKTKMDSGASLVAEIAAADHLTA
SGFGSSDGVAMNSSLNDFNEIITTQPHSSEVSSAQQDSRRNLEEPEPLKEEFPPSPSDHLSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLR
DHLFDQSYSCRSCEMPSEAHVHCYTHRQGTLTISVKKLPEILLPGERDGKIWMWHRCLRCPRINGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASR
VASCGHSLHRDCLRFYGFGQMVACFRYASINVLSVYLPPSRVDFSFENQEWMQKETDEVVNRAELLLSEVLNALSQISEKRCKIEQLNSGMKLPELRRQI
AELELMLQKEMAEFEESLHKVLSREVKNGQPVIDILEINRLRRQLLFQSYMWDNRLIYAASLDNSFHDDSNSSTSGYEEKLLEPDNSDRLVEENMGHRPG
NGFSSCDFPSVEAKLLKGSDQQGGFGSNTNLSDKVDQEMDVCLGPGHGKEGHANLCTTMSAHDLSDIKESGGNFFRTLSDGQVPIMANLSDTLDAAWTGE
NHPGVGTLKDDNNRLSDSAMEESSTTAVGLEGVDLEGRAKDQDGSKVCYSPSPALSAKDPDNMEDYMSWLRMPFLNFYRSLNKNFLTSSEKLGTLGEYNP
VYVSSFRSLELQGGARLLLPVGVNDTVIPVYDDEPTSLISYALASPEYHAQLTDEGERIKDTGESSSFSSLSESFHSLEEVSLDLYKSFGSTDESILSMS
GSRSSLILDPLSYTKAMHVKVSFGDDSPDGKARYSVTCYYAKRFETLRRICCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESF
IKFAPAYFKYLSESISSRSPTCLAKILGIYQVTSKNLKGGKETKMDVLVMENLLYRRKVTRLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFV
GNKSKRLLERAVWNDTSFLASIDVMDYSLLVGVDEEKHELALGIIDFMRQYTWDKHLETWVKASGILGGPKNESPTVISPKQYKKRFRKAMTTYFLMVPD
QWSPPSIIPSKSQSDLGEENTQGAASVD
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G163200 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.