Plant FIBer expression Database

AATP1.1,PtrAATP1 (Potri.001G175200) [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol AATP1.1,PtrAATP1
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G80300 883 / 0 ATNTT1 nucleotide transporter 1 (.1)
AT1G15500 866 / 0 ATNTT2 TLC ATP/ADP transporter (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.003G058900
[exp]
1034 / 0 AT1G80300 945 / 0.0 nucleotide transporter 1 (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10035908
[exp]
902 / 0 AT1G80300 927 / 0.0 nucleotide transporter 1 (.1)
Lus10025755
[exp]
900 / 0 AT1G80300 923 / 0.0 nucleotide transporter 1 (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0015 MFS PF03219 TLC TLC ATP/ADP transporter
Representative CDS sequence
>Potri.001G175200.1 pacid=42790707 polypeptide=Potri.001G175200.1.p locus=Potri.001G175200 ID=Potri.001G175200.1.v4.1 annot-version=v4.1
ATGGAAGCGGTGCTGCAAACCAAAGGGCTTCTTTCACTACCTTCAAACCCCAAAACCAGAGCTTTGTATCCTTCACAGGGCTTAAAGCAGAGGCTTTTTG
CTACAAAACCTAAAAATTTTACCGGGTTTTCTTTATCTTCAAATGGGGTCCCAAAATTTCCTACCTTTGTATCAAAACCAAGTGGGTTTTCCCCAAAAGA
TAGAAACTTGCATATTTGCAGGGCAGAGGCTGCAGCTGATGGACAACCTTTGTTTGGTGAAGAAACTGATAAACCAAAGTTTTTGGGTATTGAGCTTGCG
ACTCTTAAAAAAATTATCCCACTTGGGTTAATGTTCTTTTGTATTCTTTTTAACTACACAATCCTTAGAGACACTAAGGATGTGTTGGTCGTGACAGCCA
AAGGTAGCAGTGCAGAAATTATACCATTTTTGAAAACTTGGGTGAATTTGCCTATGGCTGTTGGGTTCATGTTATTGTATACAAAATTGGCTAATGTATT
GTCAAAACAAGCTCTCTTTTATACTGTAATCGTTCCTTTTATTGCCTTCTTTGGGGCTTTTGGGTTTGTTTTGTATCCTCTCAGCAACTATATCCACCCT
GAAGCATTTGCTGATAAACTTCTCAACGTACTTGGCCCAAGGTTTCTTGGTCCTCTAGCAATTATGAGGATTTGGACCTTTTGTTTGTTCTATGTCATGG
CTGAATTGTGGGGGAGTGTGGTGATTTCAGTGCTGTTCTGGGGATTTGCTAATCAGATCACTACTATAGATGAAGCAAAACGATTTTACCCTCTTTTTGG
ACTTGGGGCGAATGTTGCTCTGATTTTCTCAGGCCGAACAGTGAAGTACTTCTCTAATTTGAGAAGAAACTTGGGTCCTGGTGTTGATGGTTGGGCCATC
TCGCTCAAAGGAATGATGAGCATTGTAGTGTTGATGGGGCTTGCAATCTGTTTGTGTTACTGGTGGGTGAATACGTATGTTGCTCTACCAACCCGAAGTA
AGAAGAAGAAGGAAAAGCCAAAGATGACCACAATGGAGAGCATGAAATTCCTTGTGTCTTCCAGATATATTAGAGATCTTGCGACTTTGGTGGTTGCATA
TGGTATTAGCATCAACCTTGTTGAGGTTACCTGGAAATCAAAGTTAAAGGCGCAGTTCCCCAGCCCAAATGAGTACTCTGCCTTTATGGGTGACTTTTCA
ACAGCAACTGGAATAGCAACTTTCACGATGATGCTTCTAAGTCAATTTATATTTGACAAATATGGATGGGGAGTTGCAGCTAAAATTACACCTACAGTCC
TGCTTCTAACAGGAGTTGGTTTCTTCTCTCTGATTTTGTTTGGGGGCCCTCTTGTTCCTACCCTTGCACAGTTTGGGATGACTCCTCTTCTTGCTGCTGT
ATATGTGGGTGCCTTGCAAAACATTTTCAGCAAGAGTGCCAAGTACAGTTTGTTTGATCCATGCAAAGAAATGGCTTATATTCCCTTGGATGAGGACACT
AAGGTTAAAGGGAAGGCAGCCATTGATGTTGTCTGCAATCCGTTGGGGAAGTCTGGAGGGGCTCTTATTCAACAGTTTATGATTTTAACGTTTGGGTCAC
TTGCCAATTCAACTCCTTACCTTGGAGGAATACTTCTGGTGATCGTGCTTGCATGGTTAGCCGCGGCCAAGTCTCTGGATACCCAATTTACTGCTCTGCG
CCAGGAAGAAGAGCTTGAGAAGGAGATGGAAAGAGTGGCTGTGAAGATTCCTGTAGTGTCTCAAGAAGGTGGAAATGGCTCTCTTCCAAGTGGCACTGCA
CTCGATCCAACAACAGGTGACTCGACCAGCAGTTTGTCTGAACCTTCAACTCCCCATAAGAACTAG
AA sequence
>Potri.001G175200.1 pacid=42790707 polypeptide=Potri.001G175200.1.p locus=Potri.001G175200 ID=Potri.001G175200.1.v4.1 annot-version=v4.1
MEAVLQTKGLLSLPSNPKTRALYPSQGLKQRLFATKPKNFTGFSLSSNGVPKFPTFVSKPSGFSPKDRNLHICRAEAAADGQPLFGEETDKPKFLGIELA
TLKKIIPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYTVIVPFIAFFGAFGFVLYPLSNYIHP
EAFADKLLNVLGPRFLGPLAIMRIWTFCLFYVMAELWGSVVISVLFWGFANQITTIDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRRNLGPGVDGWAI
SLKGMMSIVVLMGLAICLCYWWVNTYVALPTRSKKKKEKPKMTTMESMKFLVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSAFMGDFS
TATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPLVPTLAQFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDT
KVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLAAAKSLDTQFTALRQEEELEKEMERVAVKIPVVSQEGGNGSLPSGTA
LDPTTGDSTSSLSEPSTPHKN

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT1G80300 ATNTT1 nucleotide transporter 1 (.1) Potri.001G175200
[exp]
0 1 AATP1.1,PtrAATP1
AT3G18690 MKS1 MAP kinase substrate 1 (.1) Potri.007G110100
[exp]
1.73 0.9184
AT4G29130 GIN2, ATHXK1 GLUCOSE INSENSITIVE 2, ARABIDO... Potri.018G088300
[exp]
2.64 0.8924 HXK1.1
AT1G34420 leucine-rich repeat transmembr... Potri.013G114200
[exp]
2.82 0.9168
AT1G01720 NAC ATAF1, ANAC002 Arabidopsis NAC domain contain... Potri.002G081000
[exp]
3.16 0.9066 Pt-ATAF1.2
AT1G15520 ATABCG40, ABCG4... Arabidopsis thaliana ATP-bindi... Potri.001G048700
[exp]
3.87 0.9130
AT1G76250 unknown protein Potri.002G011400
[exp]
4.00 0.9096
Potri.017G111050
[exp]
4.89 0.9063
AT5G38280 PR5K PR5-like receptor kinase (.1) Potri.017G009500
[exp]
6.92 0.8922
AT1G61110 NAC ANAC025 NAC domain containing protein ... Potri.004G038000
[exp]
8.12 0.8506 NAC005
AT2G30070 ATKUP1, ATKT1P,... POTASSIUM UPTAKE TRANSPORTER 1... Potri.003G148200
[exp]
9.38 0.8574

Potri.001G175200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.