Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G12810 2201 / 0 CHR13, SRCAP, PIE1 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) AT3G57300 316 / 4e-87 ATINO80 INO80 ortholog (.1.2) AT3G06400 280 / 3e-77 CHR11 chromatin-remodeling protein 11 (.1.2.3) AT5G18620 278 / 1e-76 CHR17 chromatin remodeling factor17 (.1.2) AT3G06010 266 / 1e-72 ATCHR12 Homeotic gene regulator (.1) AT5G19310 256 / 2e-69 Homeotic gene regulator (.1) AT5G66750 241 / 4e-66 CHR01, CHA1, SOM1, CHR1, SOM4, DDM1, ATDDM1 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) AT2G28290 232 / 9e-61 CHR3, SYD SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) AT2G46020 224 / 3e-58 CHA2, ATBRM, CHR2, BRM CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) AT2G13370 222 / 7e-58 CHR5 chromatin remodeling 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G022100 [exp] 3319 / 0 AT3G12810 1824 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Potri.016G043500 [exp] 320 / 2e-88 AT3G57300 2157 / 0.0 INO80 ortholog (.1.2) Potri.006G047100 [exp] 316 / 3e-87 AT3G57300 2135 / 0.0 INO80 ortholog (.1.2) Potri.010G021400 [exp] 279 / 4e-77 AT3G06400 1748 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.008G205600 [exp] 276 / 7e-76 AT3G06400 1724 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.010G091200 [exp] 269 / 2e-73 AT3G06010 1408 / 0.0 Homeotic gene regulator (.1) Potri.008G149900 [exp] 265 / 3e-72 AT3G06010 1485 / 0.0 Homeotic gene regulator (.1) Potri.019G129900 [exp] 238 / 2e-65 AT5G66750 1047 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Potri.007G026700 [exp] 238 / 4e-65 AT5G66750 993 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002974 [exp] 1078 / 0 AT3G12810 1071 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10007173 [exp] 670 / 0 AT3G12810 668 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10007174 [exp] 296 / 7e-90 AT3G12810 281 / 2e-85 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10031050 [exp] 317 / 3e-87 AT3G57300 2115 / 0.0 INO80 ortholog (.1.2) Lus10033967 [exp] 272 / 4e-73 AT5G18620 1650 / 0.0 chromatin remodeling factor17 (.1.2) Lus10041735 [exp] 250 / 5e-69 AT5G66750 1069 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10010522 [exp] 254 / 1e-68 AT3G06010 1358 / 0.0 Homeotic gene regulator (.1) Lus10034064 [exp] 253 / 2e-68 AT3G06010 1422 / 0.0 Homeotic gene regulator (.1) Lus10024019 [exp] 234 / 1e-63 AT5G66750 1034 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10012798 [exp] 230 / 4e-60 AT2G28290 1549 / 0.0 SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00271 [poplar] [flax] Helicase_C Helicase conserved C-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF04851 [poplar] [flax] ResIII Type III restriction enzyme, res subunit CL0023 [poplar] [flax] P-loop_NTPase PF07529 [poplar] [flax] HSA HSA
Representative CDS sequence Show only first row Show all	>Potri.001G207700.4 pacid=42789855 polypeptide=Potri.001G207700.4.p locus=Potri.001G207700 ID=Potri.001G207700.4.v4.1 annot-version=v4.1 ATGGCGTCGAAAGGCCCAAGGTCTAAGCTTGATCACGAGACCAGAGCTCGGCGTCAAAAGGCACTGGAAGCTCCGAGGGAGCCGCGTCGCCCTAAGACTC ACTGGGATCACGTCTTAGAGGAAATGGTTTGGTTGTCGAAGGACTTTGAGTCGGAGAGGAAATGGAAATTGGCACAAGCGAAGAAAGTGGCATTAAGAGC CAGTAAGGGCATGTTGGATCAGGCCACCAGAGGAGAGAAGAAACTGAAGGAAGAGGAGCAGCGGCTGCGAAAAGTTGCTCTTAATATTTCAAAGGATGTA AAGAAATTCTGGGTTAAAATAGAAAAGCTGGTACTTTACAAGCATCAGATGGAGCTTGATGAGAAGAAGAAAAAGGCACTTGATAAGCAGCTTGAGTTTC TTCTAGGACAAACTGAGAGGTACTCTACAATGTTAGCAGAAAATCTAGTGGACAAACCATCAGAGCAATATGCTGCACAAGATAAACCGAGAATTGCATA CAAGAAAGGAGATGATGCTAATATACCTGAGCAAGTCAATGATGAGCCTCAGTTGGACACTACAGACAATGACGATGAGTATGATGTGCAATCTGAAGAT GAAGTGGAAGATGATGAGCATACTATTGAGGAAGATGAGGCTCTTATAACTGCAGAAGAAAGGCAAGAAGAATTGGAAGCTCTGCACAATGAAACAGATA TTCCACTCGAGGAGCTACTTAACCGTTATCCTGTAGAGAAAGGTAGCGGAGAAAGTAGTGAAAATGGAGCTAAGCCATCTGCAAATGGGGAAGACCATTG TGAGAGGAAAGGAAACGATATGTCTGCTGCTAGTGACATGGAGATAAGCTGCTCACCTGTTAATGCTAGTCGTCGTTGTGGTGAAAATAATGGTGCCTTG CCCATTCCAGACAATGACTTATTGGAAATCAGGACCAATGAAACCAGAAATCAGTTAAGTATTTCTGATGATCCGGCCAAAGAACGTGTGCCATATGATT TCAGTGATGAACAGGAAGATGGTGATTTTGATCTTGCTGCAGAAGAAGAAAAGGATGACGAGACAACCTTGTTGGAAGAGGAAGAGCTGGCAAAAGCAGA TTCAAAGAATCCCATAGATGAGATCTCATTGCTGCAAAAGGAGAGTGAAATCCCTTTGGAAGAATTGCTTGCAAGGTATACCAAGGAGCCTAACAATGAA GTTTCAGAGGATGAATCTGAATATGCATCTTTATTATCAGACAATGTGTCAAATTCCCCAGGCCATGAAGATGAACTGAAGCAGCTGGATAACTCAATGG ATGGAATTGTTGAATGTGGAAACCATCCTCTTGTAGAAGAACAAGAAAAGGGAAATGAAAAAATTTCAGAAGATGGAAGGGAGAGTGAGAATAGGATTGC TGATGCTGCTGCTGCTGCAAGATCTGCACAACCAACAGGCAATACATTCTCAACAACTAAAGTGCGCACGAAGTTCCCTTTTCTTCTTAAGTACCCTCTT CGTGAATATCAACATATAGGCCTTGATTGGCTTGTTACAATGTATGAGAAAAGATTAAATGGGATTCTAGCTGATGAAATGGGGCTTGGAAAGACAATCA TGACTATTGCTTTGCTTGCACACCTGGCATGTGAAAAGGGAATATGGGGTCCTCATCTGATCGTGGTTCCCACAAGTGTCATGCTTAACTGGGAAACAGA GTTTTTTAAATGGTGTCCTGCCTTCAAGATTTTAACATATTTTGGCAGTGCAAAAGAGCGTAAATGCAAGAGGCAAGGTTGGCTGAAACCGAACTCCTTC CATGTATGCATAACAACTTACAGACTGGTTATACAGGATTCCAAAGTCTTCAAAAGGAAGAAATGGAAGTATTTGATATTGGATGAAGCTCATCTGATTA AAAATTGGAAGTCTCAGAGATGGCAAACTCTTTTAAACTTTAATTCAAAACGACGAATCTTATTAACTGGTACACCTCTGCAGAATGATCTCATGGAACT CTGGTCACTGATGCATTTCTTGATGCCCCACATCTTTCAATCTCACCAGGAATTCAAGGACTGGTTTAGCAATCCAATAACTGGGATGGTGGAGGGACAA GAAAGAGTGAACAAAGAAGTTGTTGATCGTTTGCATAATGTTCTCCGTCCATTCATCCTCCGTCGATTGAAAAGGGATGTGGAGAAGCAGCTGCCCATGA AACATGAGCATGTCATCTATTGTAGACTTTCAAGGAGGCAGCGTAACTTGTACGAGGATTTCATTGCTAGCTCAGAGACACAAGCTACCCTTGCCACTGC CAACTTTTTTGGGATGATCAGTATCATAATGCAACTTCGTAAAGTTTGTAACCATCCTGACTTATTTGAGGGTCGTCCAATTATTAGTTCTTTTGATATG GCTGGTATAGACATGCAATTAAGTAGTTCTGTTTGTTCAATGCTTTCACCTGGGCCATTGTCATCAGTAGATCTTTGTGCTTTGGGGCTTATATTTACTC ATCTTGATTTTAGCATGGCCTCTTGGGAGTACGATGAAGTAAAGTCTATTGCAACTCCATCAAGATTAATTAAGGAGCGTTCCAACCTGGATAACATAGA AGAAGTTGGACCGGGATCTAAACATTGGAAGAAGTTGCCTGGAAAAAATATTTTTGAAGAGATTAGAAAGTCATTATTGGAGGAGAGATTAAGAGAAGTG AAGCAACGGGCAGCATCTATTGCATGGTGGAATTCCTTGAGGTGTCAGAAAAAACCCATATACTCAACAACCCTACGAGAACTTCTCACAGTGAAGCATC CCATCTATGATGTCCATCGCCATAAAACTGAGCGACTCTCTTACTTGTACTCTTCTAAGCTGGGTGATGTTATTCTTTCACCAATTGAACGGTTCCAGAA GATGACTGATCTTGTGGAATCATTTATGTTTGCAATTCCAGCAGCACGTACCCCAGTACCTGTCTTCTGGTGTAGTCAGATTAGAACTCCAGTGTTTCTT CATTCAACTTATGAGGAGAAATGCTCTGAAATGTTGTTACCTCTTCTTTCACCTATCAGACCTGCAATTGTTCGGAGACAACTTTATTTTCCAGACAGGC GTCTAATACAGTTTGACTGTGGTAAATTGCAGGAGCTTGCAATTTTGCTCAGGAAGTTGAAGTCAGAAGGACACCGGGTATTAATATTCACACAGATGAC TAAGATGCTTGATATTTTGGAGGTTTTCATGAATTTGTATGGCTACACTTACATGCGCTTAGATGGATCCACTCAACCAGAGGAGAGACAAACATTAATG CAGCGTTTCAACACAAATCCCAAAATCTTTATCTTCATTTTATCAACCCGTAGTGGAGGTGTTGGCATCAATCTTGTAGGGGCAGATACTGTAATCTTCT ATGATAGTGACTGGAATCCTGCTATGGATCAACAGGCCCAAGACCGCTGCCATCGGATAGGACAGACACGTGAAGTACATATCTACAGGTTAATCAGTGA GAGCACCATTGAAGAAAACATTTTAAAGAAAGCCAATCAGAAGCGTGCTCTTGATGATCTAGTAATACAGAGTGGAGGGTACAATACGGAATTTTTCAAG AAGCTCAATCCTATGGAATTATTCTCAGGGCATAAAACACTTCAGATTAAGAATATGCAGAGGGAGAAAAACCATAACAATGGAAACGAGGTGTCTTTGT CTAATGCAGATGTGGATGCTGCTCTGAAATATGCAGAAGATGAAGCAGATTACATGGCATTGAAGAAAGTCGAACAGGAAGAGGCTGTAGACAACCAAGA GTTTACTGAAGAGGCCATTGGGAGATTGGAAGATGATGAATTTGTGAATGATGATGATATGAAGGCTGATGAGCCTACAGACCATGAGATGACAACTTAT AGTAAAGATGGTGCAGTGAATTTAAAAGAGAATGGTTGCATTGAAGAGAGAGCTGTAACTCTTACTGGCAATGAAGATGTTGATATGTTGGCTGATGTCA AACAGATGGCGGCGGCGGCGGCTGCTGCTGGACAAGCTATCTCATCCTTTGAGAATCAGCTACGTCCAATTGACAGATATGCGGTTCGGTTTCTGGAATT GTGGGATCCAATTATAGACAAAGCAGCCTTGGAATCTCAAGTTGGGTTTGAGGAGACCGAATGGGAGCTTGATCGTATTGAGAAGTACAAGGAGGAAATG GAAGCTGAGATTGATGATGATGAGGAACCATTGGTTTATGAAAGATGGGATGCTGATTTTGCGACTGAGGCATACCGACAAGAAGTTGAGGCATTAACTC AACATCAGCTGTTGGAAGAACAGGAAGCTGAAGCTAATGAGAAGGAAGGTGCAGATGATGGACATTTAGATGCTATGGTGTATAAAATGCCACGTAATCC TAAATTGAAGTCTAAGAAGAAACCAAAGAAAGCCAAGTTCAAATCTCTGAAGAAAGAATCTTTGACTTCTGAATTGAAACACGTGAAAGAGGAGGTATCA ATGGAAACTTTGTCTGTAGATGATGATGATGATGGTACATATTCGGATACGATGTCTCCTTGTTCCAGTATGTGGAGAAAGCGTAAGAAAGCAGAATCAG CAATTTGTATTGACAAAACGAGGTCGAAGAAGACTAAGAAATTCAAAAAGGGTCCAGAAACGTGCACTTTTAGTGTAGATTCAGACCTGTCTGGAAAGCA GCATGACAGATTTACGGAACTAAAACCATATGAGGTTGTGGTTTCCGATATTGAGCAGAAGCCAGCTAGCAGGAGCAAAATGGGAGGGAAAATATCCATC AGTACCATGCCAGTGAAACGGGTTTTGATGATAAAGCCAGAGAAGTTGAAGAAGGGGAATGTTTGGTTGAAAGATTGTGTTCCACCACCTGCTTTATGGA TGCCACAGGAGGATGCAGTATTATGTGCTGTTGTACATGAATATGGTCCACATTGGAGCTTGGTCAGTGAAATTCTGTATGGGATGACTGCTGGTGGGTT TTATCGGGGAAGATACCGCCATCCAGTTCATTGTTGTGAGAGATTTAGGGAGCTAATCCACAGATATGTTTTATTTTCTCCGGAAAATCCTATTAATAAT GAAAAGATGAGCAACATGGTCCCTGGGAAGGCCCTTCTGAAAGTAACCGAGGATAACATACGGATGTTGTTAAATGTTGTTGCTGAGCAGCCAGACCATG AGTTACTTCTCCAGAAGCACTTCACAGCACTGCTTTCTTCTGTGTGGAGGGTGAAATCTCGTGTTGAAAATCAACAAAACATGCCATCATCTCGAAATGC CCTTTATAACAGTGGAAGGGTTTTCAATTCTTCTGTTAATCCGTTACCTTGGAACTCCTTGAGGGAATCGGCAAAAAGAATGAAATTCACTAATTTGGGA CAGAGTACCAAGTTGCTGGCAGCTGCACTCCATGATGCCAGCAGTAGAAGGCCAGGTGATAGAGTTTCCAATTCCAATGTGAATGAAGAAGCTCCTGCTG TAGGCGAGAAGCTGGAAATAACATTGGAATTCCAAAAGGAGGAAAATGATTATTTGATTCCATTCCCACCTGTAATAAGTTTGTCAATACCTGGCTCAGC ACCATGGATGTCTGTAAATAAGGATAGAGCGGCGGCTCACCATCTCAGGGCATCCACAAGCATAGCTGAAAATCGATTCAGGGATGCAGCAAGAGCTTCT TCATCTGTGTTACCAGCAAATGATTTGAAGTTGTGGCTGGCTTCAAAGACTCAGTCCTTGGGAAAGCACAAGCTAACTGTCTCTGAGTCAACCAAGCCTC CTAGGTCAAAGACGAGGAAAACTTTGCTGGAGCAAAATGAAGGACATGCCGAGCCAGTAATGCAACCACTGTCAGATAGGGATCCCAATTTAAGGTTTGA CCTGCCACCAGAAGTCATTCAGGATGATAAGGATGGGTTTTCTATTTCATTCATGGAAAAAGAACTTTCAGTGGAAACGAAGATCTCCGAAGCTGTCCCG CATATCTATGTTCCTGATTTGATATTGGGTCTTGATGATTATTCTTTGTTGCCGGAATACACTGACATTGGATAG
AA sequence Show only first row Show all	>Potri.001G207700.4 pacid=42789855 polypeptide=Potri.001G207700.4.p locus=Potri.001G207700 ID=Potri.001G207700.4.v4.1 annot-version=v4.1 MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDV KKFWVKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDKPSEQYAAQDKPRIAYKKGDDANIPEQVNDEPQLDTTDNDDEYDVQSED EVEDDEHTIEEDEALITAEERQEELEALHNETDIPLEELLNRYPVEKGSGESSENGAKPSANGEDHCERKGNDMSAASDMEISCSPVNASRRCGENNGAL PIPDNDLLEIRTNETRNQLSISDDPAKERVPYDFSDEQEDGDFDLAAEEEKDDETTLLEEEELAKADSKNPIDEISLLQKESEIPLEELLARYTKEPNNE VSEDESEYASLLSDNVSNSPGHEDELKQLDNSMDGIVECGNHPLVEEQEKGNEKISEDGRESENRIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPL REYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFFKWCPAFKILTYFGSAKERKCKRQGWLKPNSF HVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGMVEGQ ERVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLRKVCNHPDLFEGRPIISSFDM AGIDMQLSSSVCSMLSPGPLSSVDLCALGLIFTHLDFSMASWEYDEVKSIATPSRLIKERSNLDNIEEVGPGSKHWKKLPGKNIFEEIRKSLLEERLREV KQRAASIAWWNSLRCQKKPIYSTTLRELLTVKHPIYDVHRHKTERLSYLYSSKLGDVILSPIERFQKMTDLVESFMFAIPAARTPVPVFWCSQIRTPVFL HSTYEEKCSEMLLPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEVFMNLYGYTYMRLDGSTQPEERQTLM QRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFK KLNPMELFSGHKTLQIKNMQREKNHNNGNEVSLSNADVDAALKYAEDEADYMALKKVEQEEAVDNQEFTEEAIGRLEDDEFVNDDDMKADEPTDHEMTTY SKDGAVNLKENGCIEERAVTLTGNEDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKAALESQVGFEETEWELDRIEKYKEEM EAEIDDDEEPLVYERWDADFATEAYRQEVEALTQHQLLEEQEAEANEKEGADDGHLDAMVYKMPRNPKLKSKKKPKKAKFKSLKKESLTSELKHVKEEVS METLSVDDDDDGTYSDTMSPCSSMWRKRKKAESAICIDKTRSKKTKKFKKGPETCTFSVDSDLSGKQHDRFTELKPYEVVVSDIEQKPASRSKMGGKISI STMPVKRVLMIKPEKLKKGNVWLKDCVPPPALWMPQEDAVLCAVVHEYGPHWSLVSEILYGMTAGGFYRGRYRHPVHCCERFRELIHRYVLFSPENPINN EKMSNMVPGKALLKVTEDNIRMLLNVVAEQPDHELLLQKHFTALLSSVWRVKSRVENQQNMPSSRNALYNSGRVFNSSVNPLPWNSLRESAKRMKFTNLG QSTKLLAAALHDASSRRPGDRVSNSNVNEEAPAVGEKLEITLEFQKEENDYLIPFPPVISLSIPGSAPWMSVNKDRAAAHHLRASTSIAENRFRDAARAS SSVLPANDLKLWLASKTQSLGKHKLTVSESTKPPRSKTRKTLLEQNEGHAEPVMQPLSDRDPNLRFDLPPEVIQDDKDGFSISFMEKELSVETKISEAVP HIYVPDLILGLDDYSLLPEYTDIG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Potri.001G207700 [exp]	0	1
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Potri.019G054600 [exp]	1.41	0.9088
AT4G00060		MEE44	maternal effect embryo arrest ...		Potri.014G066000 [exp]	1.41	0.8885
AT2G33540		CPL3, ATCPL3	C-terminal domain phosphatase-...		Potri.001G065600 [exp]	2.44	0.8677
AT3G04160			unknown protein		Potri.019G029400 [exp]	3.16	0.8747
AT3G61690			nucleotidyltransferases (.1)		Potri.002G169732 [exp]	3.74	0.8671
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Potri.003G022100 [exp]	4.24	0.8846	CHR928,PIE1.4
AT1G08600		ATRX, CHR20	P-loop containing nucleoside t...		Potri.013G048500 [exp]	4.69	0.8431	CHR923
AT1G08600		ATRX, CHR20	P-loop containing nucleoside t...		Potri.019G021500 [exp]	6.00	0.8327
AT2G39260			binding;RNA binding (.1)		Potri.008G045400 [exp]	6.00	0.8538
AT1G79280		AtTPR, NUA	TRANSLOCATED PROMOTER REGION, ...		Potri.008G080900 [exp]	6.00	0.8827

Compare expression of checked genes

Potri.001G207700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.