Potri.001G230000 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G230000.19 pacid=42788423 polypeptide=Potri.001G230000.19.p locus=Potri.001G230000 ID=Potri.001G230000.19.v4.1 annot-version=v4.1
ATGTCAAATAGAAGGGGGTCTGATCAGCAACCACCGCAGAAGCGGATTCTGCGGACTCAGACTGCTGGTAATCTAGGAGAGTCCATGTTGGATAGTGAGG
TGGTGCCTTCTTCTCTGGTTGAGATTGCTCCAATTCTCCGTGTTGCTAATCAAGTTGAGGGAAGCAACCCTAGAGTTGCTTATCTCTGTCGGTTCTATGC
CTTTGAGAAAGCTCACAGACTAGATCCCACATCTAGTGGGCGTGGTGTTCGGCAGTTTAAAACTGCACTTCTACAACGTTTGGAAAGGGAAAATGACACC
ACCATGCAAGGAAAAACGATAAGTGATGCTCGAGAAATGCAGAGATTTTATCTAGATTACTATCAGAAGTATATACAAGCCTTACGAGATGCCGCTGATA
AAGCTGATCGTGCCCAACTTACAAAAGCTTATCAAACTGCTGCTGTCCTATTTGAGGTTTTGAGGGCTGTCAACACGACAGAGGCTGTGAAAGTAGATGA
TGAGGTTTTGGAAGCTCAGACTGAAGTTGAAGAAAAGAACCGAATTTATGTACCCTATAATATTCTTCCTCTTGATCCTGAAAGTGAACATCAAGTTATC
ATGAGATATCCTGAGATTAAAGCTACTGTTATTGCACTTCGAAACACCAGGGGTCTTCCATGGCCAAAGGGGCACAAGAAGAGAGTAAATGAAGACATTT
TAGATTGGCTTCAGGCTATGTTTGGCTTTCAGAAAGATAATGTGGAAAATCAAAGGGAGCACTTGATTCTGTTGCTTGCGAATGTGCATATACGGCAATT
TCCAAAGCCTGATCAGCAACCCAAGTTGGATGACATGGCCGTGACAGATATTATGAAGAAACTGTTTAAGAACTACAAAAAATGGTGCAAGTATTTAGGA
CGCAAAAGTAGCCTTTGGCTGCCGACTATTCAACAAGAAGTGCTACAGAGAAAACTACTCTATATGGGTCTGTATCTTCTTATATGGGGAGAAGCAGCAA
ACTTGAGATTCATGCCAGAATGCCTTTGCTATATATATCATCATATGGCATTTGAACTGTATGGAATGTTGGCTGGGAGTGTCAGTCCAATGACGGGTGA
GCATATAAAGCCAGCCTATGGTGGTGAAAATGAGGCTTTTCTAAGGAAAGTAGTAAAACCTATATATGACACGATAGCAAGGGAAGCAAAAATGAGCAAA
GATGGAAGTTCAAAGCATTCTCAATGGAGAAACTATGATGATTTGAATGAATACTTTTGGTCAGCTGATTGTTTCCGATTAGGATGGCCTATGCGTGCTG
ATGCTGATTTTTTTTGCCCCTCTGCATTGGGGCTTCGAGCTGAAAAAGATGAGGTTAAGAAACCAGTTACAGGGGATCGATGGATTGGAAAAGTTAATTT
TGTTGAAATAAGATCATTTTGGCATATTTTCAGAAGTTTTGATAGAATGTGGAGCTTCTTTATTCTGTGTTTACAGGCGATGATCATCATTGCTTGGAAT
GGATCAGGAAAGTTGAGTTCTATATTTGAGGGTGACGTTTTCAAGAAAGTTTTGAGCATCTTCATCACTTCTACGATACTAAATTTTGGACAAGCTGTCA
TTGATATCATTCTGATGTGGAAGGCAAGGAAGACTATGCCATTTTACGTGAAAATAAGATATGTTTTAAAGGTTCTTTCAGCTGCAGCATGGGTCATAAT
TCTACCGGTAACTTATGCGTATAGTTGGAAAAATCCTCCTGGACTTGGACAGACCATTAAGAAATGGTTTGGCAGTAGTCCAAGTTCGCCTTCTTTGTTC
ATCATGGCTATCCTAATTTACTTGTCTCCAAATATCCTCTCTGTGTTATTGTTTGTGTTCCCATTAATTCGGAGGGTTCTTGAACGTTCAAACAATAAGA
TTGTGTTGTTCCTGATGTGGTGGTCACAGCCTCGGCTTTATGTTGGAAGGGGAATGCATGAGAGTTCTGTTTCACTGATCAAGTACACCATGTTTTGGGT
TCTCCTACTAGTGTCAAAATTAGCATTCAGTTTTTTCGTAGAGATTAAGCCACTTGTTGGTCCAACAAAAGCTGTCATGAAGGCTCGCATACATGACTAC
CAGTGGCATGAGTTTTTTCCTCAAGCCAAGAGTAATATTGGTGTCGTGATTTCTTTGTGGGCTCCTGTTGTTCTTGTCTATTTTATGGATACTCAGATTT
GGTATGCCATCTACTCAACTATATTTGGAGGCATATATGGCGCGTTTCGCCGTCTTGGAGAGATTCGTACATTAGGAATGTTGAGGTCTCGATTCGAATC
ATTACCAGGTGCCTTTAATGCCTGCTTGATTCCTCCTGAAAAGGTTGAGACTATCAAGAAGAGAGGACTGAATGCTATTTTCTCTCGTAGAAATACTGGG
ATTGTAGTTCAGACCGAATCCAACAAAGAGAAGGAGGAAGCAAGGTTTGCACAAATGTGGAATAAAATAATCACTAGCTTCTGGGAGGAGGATTTGATAG
ATAATAGGGAAATGAATTTGATGCTTGTTCCCTATTGGGCTGATCGTGACCTAGACCTCATTCAATGGCCTCCATTTTTGCTTGCTAGCAAGATCCCAAT
AGCATTGGATATGGCAAAAGACAGCAATCGAAATGACCGTGAACTGAAAAATAGGTTGGCTTCAGACAATTATATGCACTGTGCAGTTCGTGAGTGCTAT
GCTTCTTTTAAAAGTATCATCAATTTTTTGGTTCAAGGAGATGGGGAAAAACAGGTTATAGAAGATATCTTCGCCAGAGTTGATGAATATATAGAAAAGG
ACACCCTGATACAAGAATTAAATATGAGTGCCCTACCAATTCTCAATGAACAATTTGTGAAGCTAATTGACTTTTTGATAATCAATAACAAAGAAGACAA
GAATCGTGTTGTCATCCTCTTGCTTGACATGCTAGAGGTCGTGACCAGGGACATACTGGAGGATGATATTCCTAGTTTGATGGATTCAAACCATGGTGGA
TCTTATGGAAATGATGAGGGAATGACACCAATTGATCAGCAACATACGTTTCTCGGCAAACTCGGGTTTCCAGTTCCAGAGACAGAAGATTGGAAAGAAA
GAATCAGAAGGCTTCATCTATTGCTTACTGTGAAGGAGTCTGCTATGGATGTTCCATCTAACTTGGAAGCTAGAAGGCGCATTTCTTTCTTCTCCAATTC
ATTGTTCATGGAAATGCCTAGTGCACCTAAAGTTCGAAATATGCTTTCGTTCACTGTCCTAACTCCTTATTACCGCGAAGAGGTTAATTACTCTATAAAT
CTTCTGGAAAAGCAAAATGATGATGGTGTTTCTATCCTTTTTTACTTGCAAAAGATCTTTCCAGATGAATGGAAAAACTTCCTCGAGCGGGTCGGATGTA
ACAGCGAGGAAGAACTCCGTGCAAATGATGTATTGGAGGAAGAACTCCGTTTGTGGGCATCATATAGAAGCCAAACATTAACAAAAACAGTACGAGGAAT
GATGTATTACCGAAAAGCTTTGGAACTTCAAGCATTCCTTGATATGGCAAATGATGAAGAACTAATGAGGGGCTACAAGGCTGCTGAATTAAATAGTGAG
GGACCATCCAAGAGTGATAACTCAACTTGGCAACAATGTCAAGCAATAGCTGACTTGAAATTTACATATGTCGTGTCATGCCAAGAATATGGCAAGCACA
AACGTGCAGGTCATCCTCTTGCCAAAGACATTTTGAGGCTCATGACAACATATCCATCACTTCGCGTGGCTTATATTGACGAAGTTGAAGAAACTGGAAA
AGATAAATCCAAAAAGATGGTTGAGAAGGTTTATTATTCAACTCTCGTGAAAGTTGCTCCTCCAACCAAACCTATTGATTCTTCCGAGCCAATTCAAAAT
CTAGACCAGGTAATTTATCGGATAAAACTTCCAGGGCCAGCAATGTTAGGTGAGGGAAAGCCAGAAAATCAGAACCATGCCATTATTTTCACTCGCGGGG
AAGCCTTGCAAACAATAGACATGAACCAGGATAACTACATGGAAGAAGCCTTCAAAGTGAGGAACTTGCTTCAAGAATTTCTTAAAAAGCATGACGGTGT
GAGATATCCGACAATTCTTGGGCTTAGGGAGCACATATTCACTGGCAGTGTTTCATCTCTAGCATGGTTTATGTCAAATCAGGAGACTAGTTTTGTGACT
ATTGGTCAGAGATTGTTGGCTAGCCCTTTGAAAGTACGGTTCCATTATGGTCACCCGGATGTTTTTGATAGACTATTTCACTTGACGAGAGGGGGTGTCA
GCAAAGCTTCTAAAGTCATCAATTTAAGCGAGGACATATTTGCAGGTTTCAATTCTACATTACGTGAAGGCAATGTTACTCATCATGAATATATCCAAGT
TGGTAAAGGGAGGGATGTGGGCCTTAACCAGATATCTATGTTCGAGGCAAAGATAGCCAATGGGAATGGTGAGCAGACATTGAGTCGCGACATATATAGG
CTTGGACATCGATTTGATTTTTTCCGAATGTTGTCATGCTACTTCACCACAATTGGTTTCTATTTTAGTACTATGTTAACTGTACTCACTGTCTATGTGT
TTCTATATGGCCGCCTATATCTCGTTCTCAGTGGACTCGAAAAAGGCTTAAGTACTCAGCGAGCTATTAGAGACAACAAGGCTCTTCAAGTAGCTCTTGC
TTCTCAGTCTTTTGTGCAAATTGGATTTTTGATGGCTTTGCCTATGATGATGGAAATTGGTCTGGAGAAAGGATTTCGTAATGCATTAAGTGATTTCATA
TTGATGCAGTTACAATTGGCCCCTGTATTTTTCACATTTTCTCTTGGAACAAAGACTCACTATTATGGAAGGACATTGCTGCATGGAGGTTCAGCATACA
GAGCTACTGGCCGTGGCTTCGTAGTGTTCCATGCTAAGTTTGCTGATAACTACAGGTTGTATTCTCGCAGCCATTTCGTCAAAGGGATTGAATTGATGAT
TCTGCTTCTTGTATTCCATATATTTGGGCGTTCATACAGAGGTGTAGTTGCATATGTTTTAATCACTATATCAATGTGGTTCATGGTGGGGACATGGCTT
TTTGCTCCTTTCCTTTTCAATCCATCAGGGTTTGAGTGGCAAAAGATTCTTGATGACTATACAGATTGGAATAAGTGGATAAATAACCGTGGAGGGATTG
GTGTTCATCCAGATAAAAGTTGGGAATCCTGGTGGGAAAAGGAGCAGGAGCATCTCCGCTTTTCTGGGAAGCGAGGCATCATTGTGGAGATACTGTTGTC
ACTGCGCTTTTTCATCTTTCAGTATGGCCTTGTGTACCATCTCAGTATTGTTGACAAGACCAAAAGTTTTCTGGTTTATGGTGTTTCATGGATTGTGATC
ATTCTAGTATTGTTTTTAATGAAGGCTGTAGCTGTAGGAAGAAGACAGCTCAGTGCAAACTTCCAACTCTTGTTTCGGCTCATTAAGGGTCTCATATTCA
TAACTTTTATTTCCGTATTCATCACCTTGATAGCACTCCCTCACATGACAATACGGGATGTTATAGTCTGCATTCTTGCATTCTTGCCTTCTGGATGGGG
ACTGCTGCTGATTGCACAGGCCTGCAAGCCACTTATACAGCACGCTGGCTTTTGGGGATCGGTCCGGACACTTGCTCGTGGTTATGAAATAGTCATGGGT
TTGCTTCTATTCACACCCGTTGCATTCTTGGCTTGGTTCCCATTTGTTTCCGAGTTCCAAACTCGAATGCTGTTCAACCAAGCTTTCAGTCGAGGTCTTC
AGATCTCCCGTATTCTTGGTGGGCCGAGAAAAGACCGCACTTCTAGAAACAAGGAGTAA
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AA sequence
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>Potri.001G230000.19 pacid=42788423 polypeptide=Potri.001G230000.19.p locus=Potri.001G230000 ID=Potri.001G230000.19.v4.1 annot-version=v4.1
MSNRRGSDQQPPQKRILRTQTAGNLGESMLDSEVVPSSLVEIAPILRVANQVEGSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENDT
TMQGKTISDAREMQRFYLDYYQKYIQALRDAADKADRAQLTKAYQTAAVLFEVLRAVNTTEAVKVDDEVLEAQTEVEEKNRIYVPYNILPLDPESEHQVI
MRYPEIKATVIALRNTRGLPWPKGHKKRVNEDILDWLQAMFGFQKDNVENQREHLILLLANVHIRQFPKPDQQPKLDDMAVTDIMKKLFKNYKKWCKYLG
RKSSLWLPTIQQEVLQRKLLYMGLYLLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGSVSPMTGEHIKPAYGGENEAFLRKVVKPIYDTIAREAKMSK
DGSSKHSQWRNYDDLNEYFWSADCFRLGWPMRADADFFCPSALGLRAEKDEVKKPVTGDRWIGKVNFVEIRSFWHIFRSFDRMWSFFILCLQAMIIIAWN
GSGKLSSIFEGDVFKKVLSIFITSTILNFGQAVIDIILMWKARKTMPFYVKIRYVLKVLSAAAWVIILPVTYAYSWKNPPGLGQTIKKWFGSSPSSPSLF
IMAILIYLSPNILSVLLFVFPLIRRVLERSNNKIVLFLMWWSQPRLYVGRGMHESSVSLIKYTMFWVLLLVSKLAFSFFVEIKPLVGPTKAVMKARIHDY
QWHEFFPQAKSNIGVVISLWAPVVLVYFMDTQIWYAIYSTIFGGIYGAFRRLGEIRTLGMLRSRFESLPGAFNACLIPPEKVETIKKRGLNAIFSRRNTG
IVVQTESNKEKEEARFAQMWNKIITSFWEEDLIDNREMNLMLVPYWADRDLDLIQWPPFLLASKIPIALDMAKDSNRNDRELKNRLASDNYMHCAVRECY
ASFKSIINFLVQGDGEKQVIEDIFARVDEYIEKDTLIQELNMSALPILNEQFVKLIDFLIINNKEDKNRVVILLLDMLEVVTRDILEDDIPSLMDSNHGG
SYGNDEGMTPIDQQHTFLGKLGFPVPETEDWKERIRRLHLLLTVKESAMDVPSNLEARRRISFFSNSLFMEMPSAPKVRNMLSFTVLTPYYREEVNYSIN
LLEKQNDDGVSILFYLQKIFPDEWKNFLERVGCNSEEELRANDVLEEELRLWASYRSQTLTKTVRGMMYYRKALELQAFLDMANDEELMRGYKAAELNSE
GPSKSDNSTWQQCQAIADLKFTYVVSCQEYGKHKRAGHPLAKDILRLMTTYPSLRVAYIDEVEETGKDKSKKMVEKVYYSTLVKVAPPTKPIDSSEPIQN
LDQVIYRIKLPGPAMLGEGKPENQNHAIIFTRGEALQTIDMNQDNYMEEAFKVRNLLQEFLKKHDGVRYPTILGLREHIFTGSVSSLAWFMSNQETSFVT
IGQRLLASPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYR
LGHRFDFFRMLSCYFTTIGFYFSTMLTVLTVYVFLYGRLYLVLSGLEKGLSTQRAIRDNKALQVALASQSFVQIGFLMALPMMMEIGLEKGFRNALSDFI
LMQLQLAPVFFTFSLGTKTHYYGRTLLHGGSAYRATGRGFVVFHAKFADNYRLYSRSHFVKGIELMILLLVFHIFGRSYRGVVAYVLITISMWFMVGTWL
FAPFLFNPSGFEWQKILDDYTDWNKWINNRGGIGVHPDKSWESWWEKEQEHLRFSGKRGIIVEILLSLRFFIFQYGLVYHLSIVDKTKSFLVYGVSWIVI
ILVLFLMKAVAVGRRQLSANFQLLFRLIKGLIFITFISVFITLIALPHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMG
LLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G230000 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.