Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP86.5
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G58860 790 / 0 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) AT4G00360 637 / 0 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G63710 625 / 0 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT2G45970 618 / 0 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) AT1G01600 617 / 0 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT5G08250 397 / 6e-134 Cytochrome P450 superfamily protein (.1) AT5G23190 394 / 8e-132 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT1G24540 361 / 1e-119 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) AT1G13140 355 / 5e-117 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT1G13150 352 / 7e-116 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G043700 [exp] 902 / 0 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.003G129100 [exp] 649 / 0 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.014G085800 [exp] 632 / 0 AT2G45970 866 / 0.0 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Potri.007G072100 [exp] 394 / 9e-132 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 387 / 5e-129 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.008G183300 [exp] 367 / 8e-122 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.010G050100 [exp] 360 / 3e-119 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 348 / 6e-115 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.016G031700 [exp] 345 / 1e-113 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040687 [exp] 786 / 0 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 784 / 0 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 619 / 0 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10014768 [exp] 572 / 0 AT4G00360 756 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) Lus10024644 [exp] 426 / 3e-146 AT1G63710 562 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10017394 [exp] 386 / 1e-128 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10010193 [exp] 384 / 4e-128 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 358 / 9e-118 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10018831 [exp] 335 / 1e-112 AT4G00360 403 / 8e-139 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) Lus10037157 [exp] 318 / 1e-102 AT1G69500 868 / 0.0 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.001G249700.1 pacid=42787625 polypeptide=Potri.001G249700.1.p locus=Potri.001G249700 ID=Potri.001G249700.1.v4.1 annot-version=v4.1 ATGGAGACCTTGCCCTTGTTCTTCACCCTAGCAGCTGCTACTTTGGCTTATCTCCTATGGTTCTATCTCCTATCTCGTAAACTTACCGGCCCAAGAGTAT GGCCTTTAGTGGGTAGCCTTCCATATCTCTTCATGAACCGTAGAAGAATCCATGACTGGATTGCTGGTAACCTCCGTGCAACTGGTGGTGCCGGAACCTA CCAAACGTGCACGATAGCACTTCCTTTCTTTGCTCGCAAACAAGGATTCTACACTGTCACCTGCCACCCCAAAAACTTGGAACATATTCTTCGAACCCGG TTTGATAATTATCCCAAAGGACCCGATTGGCAAACTGCCTTTCACGATCTTTTAGGCCAAGGGATCTTTAATACTGATGGAGAAACGTGGCTCATACAAC GCAAAACCGCAGCTCTCGAGTTCACTACTCGGACTTTACGGCAGGCCATGGCTCGGTGGGTGAACCAGACAATCAAGAATCGTCTATGGAACATTTTGGA CAAGGCGGCTACAGAGAAGCTGTCGGTGGACTTGCAAGACTTATTGCTTCGCTTAACCTTCGATAACATATGTGGACTCACATTTGGCAAAGATCCAGTA ACTCTCTCTCTAGAAATGTCAGATAATCCATTTTCTATTGCCTTTGACACGGCCACTGAAGCTACTCTTCAGAGGCTTCTTTACCCTGGTTTCTTATGGA GGCTGGAGAAGCTTCTAGGGATTGGAGCAGAGAAGAGATTAAAGAGGAGCCTCGAAGTTGTAGAAACGTACATGGATGATGCCATTGCAGCACGCAAAGA AAACCCATCAGATGATTTGTTATCTCGGTTCATGAAGAAGAGAGACGTTGACGGCAACCACTTCCCAATCTCTGTTCTGCAACGAATTGCTCTCAACTTC GTCCTCGCCGGCCGTGACACCTCATCTGTTGCTCTTAGCTGGTTCTTCTGGCTAGTCATGAACCATCCTGAAGTCGAAGCAAAGATAATCAAGGAAATAT CAACTATACTCACAGAAACACGTGGAAATGATCACCAGAAATGGCTTGGTGAGCCTTTAGACTTTGATGAAGCTGATAAATTGGTTTATCTCAAAGCAGC ATTAGCTGAAACACTGCGTTTATACCCGTCAGTACCACAAGATTTCAAATACGTAGTAGCAGACGATGTTTTGCCTGACGGTACATATGTACCAGCTGGT TCCACTGTTACATATTCTATTTATTCTGTTGGGAGGATGAAGAGCATATGGGGCGAGGACTGCCAGGAATTTAAACCAGAGCGATGGCTATCACCAGAAG AGGACAGATTTGATTCACCTAAAGACGGCTACAAGTTTGTGGCCTTTAATGCTGGACCCAGGACTTGCCTGGGGAAGGACTTGGCTTACTTGCAAATGAA GTCTGTGGCTTCTGCTGTGCTGTTGCGCTACCGATTATCACTGGTTCCCGGCCACTGCATAGAGCAGAAGATGTCTCTTACATTGTTCATGAAGAATGGG CTTCGTGTATTCTTGCATCCTCGTAATCTTGCATAG
AA sequence Show only first row Show all	>Potri.001G249700.1 pacid=42787625 polypeptide=Potri.001G249700.1.p locus=Potri.001G249700 ID=Potri.001G249700.1.v4.1 annot-version=v4.1 METLPLFFTLAAATLAYLLWFYLLSRKLTGPRVWPLVGSLPYLFMNRRRIHDWIAGNLRATGGAGTYQTCTIALPFFARKQGFYTVTCHPKNLEHILRTR FDNYPKGPDWQTAFHDLLGQGIFNTDGETWLIQRKTAALEFTTRTLRQAMARWVNQTIKNRLWNILDKAATEKLSVDLQDLLLRLTFDNICGLTFGKDPV TLSLEMSDNPFSIAFDTATEATLQRLLYPGFLWRLEKLLGIGAEKRLKRSLEVVETYMDDAIAARKENPSDDLLSRFMKKRDVDGNHFPISVLQRIALNF VLAGRDTSSVALSWFFWLVMNHPEVEAKIIKEISTILTETRGNDHQKWLGEPLDFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTYVPAG STVTYSIYSVGRMKSIWGEDCQEFKPERWLSPEEDRFDSPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSLVPGHCIEQKMSLTLFMKNG LRVFLHPRNLA

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G58860		CYP86A1	"cytochrome P450, family 86, s...		Potri.001G249700 [exp]	0	1	CYP86.5
AT2G23540			GDSL-like Lipase/Acylhydrolase...		Potri.007G036300 [exp]	1.00	0.9874
AT1G53270		ABCG10	ATP-binding cassette G10, ABC-...		Potri.011G112100 [exp]	3.46	0.9251	2
AT1G68850			Peroxidase superfamily protein...		Potri.010G134500 [exp]	4.00	0.9671
AT3G24240			Leucine-rich repeat receptor-l...		Potri.003G175700 [exp]	5.19	0.9327
AT5G58860		CYP86A1	"cytochrome P450, family 86, s...		Potri.009G043700 [exp]	5.19	0.9626	CYP86A19,Pt-CYP86.4
AT5G11320		YUC4	YUCCA4, Flavin-binding monooxy...		Potri.006G248200 [exp]	6.08	0.8938	Pt-YUC.2
AT1G22360		ATUGT85A2, AT2	UDP-glucosyl transferase 85A2 ...		Potri.002G098300 [exp]	6.48	0.9246
AT4G20390			Uncharacterised protein family...		Potri.011G154900 [exp]	7.21	0.9611
AT4G31540		ATEXO70G1	exocyst subunit exo70 family p...		Potri.010G250500 [exp]	8.36	0.8953
AT1G53270		ABCG10	ATP-binding cassette G10, ABC-...		Potri.001G393300 [exp]	8.36	0.9573	3

Compare expression of checked genes

Potri.001G249700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.