Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-TOR.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G50030 4080 / 0 TOR target of rapamycin (.1.2) AT5G40820 191 / 3e-48 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 177 / 6e-44 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT2G17930 90 / 2e-17 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT4G36080 86 / 3e-16 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT1G60490 69 / 4e-11 PI3K, ATVPS34 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) AT5G64070 65 / 9e-10 PI-4KBETA1, PI4KBETA1 phosphatidylinositol 4-OH kinase beta1 (.1) AT5G09350 62 / 4e-09 PI-4KBETA2, PI4KBETA2 phosphatidylinositol 4-OH kinase beta2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G084500 [exp] 4618 / 0 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.004G147800 [exp] 236 / 7e-62 AT1G50030 252 / 2e-66 target of rapamycin (.1.2) Potri.004G179000 [exp] 194 / 3e-49 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.015G076650 [exp] 183 / 1e-45 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.005G114300 [exp] 85 / 1e-15 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057850 [exp] 83 / 1e-15 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.012G075100 [exp] 80 / 2e-14 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) Potri.005G059000 [exp] 67 / 3e-10 AT5G64070 1497 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.007G109000 [exp] 66 / 5e-10 AT5G64070 1412 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037246 [exp] 4330 / 0 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 2699 / 0 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10023840 [exp] 231 / 6e-60 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10025091 [exp] 187 / 9e-47 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10023991 [exp] 185 / 3e-46 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10019489 [exp] 145 / 5e-34 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10041911 [exp] 87 / 9e-17 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041910 [exp] 87 / 3e-16 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10028458 [exp] 86 / 5e-16 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10030605 [exp] 79 / 5e-14 AT1G60490 1325 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00454 [poplar] [flax] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase CL0020 [poplar] [flax] TPR PF02259 [poplar] [flax] FAT FAT domain CL0020 [poplar] [flax] PF02260 [poplar] [flax] FATC FATC domain CL0020 [poplar] [flax] PF08771 [poplar] [flax] FRB_dom FKBP12-rapamycin binding domain
Representative CDS sequence Show only first row Show all	>Potri.001G289200.1 pacid=42792284 polypeptide=Potri.001G289200.1.p locus=Potri.001G289200 ID=Potri.001G289200.1.v4.1 annot-version=v4.1 ATGGCCTCCACATCGCAGTCCCTCCGTTTTCTGGTCGGGCCTGCAACCACCGCCCCCGGCGGCGGAAGTTTCGACGCTCTTAATCGCATCCTTGCCGACC TCTGCACTCGCGGCAACCCTAAGGAGGGGGCGACATTAGCATTGAGAAAACATCTAGAGGAAGAAGCACGTGATATAAGTGGAGAAGCATTTCCCCGTTT TATGGATCATTTATATGAAAGAATTTCTAGTTTATTAGAGAGTAACGAGGTTGCTGAGAACTTGGGAGCATTAAGAGCAACTGATGAGTTAATAGACGTA GCACTTGGAGAGAATGCATCCAAAGTGTCAAAGTTTGCTATTTATATGCGGAGTGTGTTTGAGGTAAAGCGGGATCCTGAAGTGTTGACACATGCTAGTA GAGTTCTTGGCCATTTGGCTAGGGCTGGTGGAGCAATGACTGCAGATGAAGTGGAATTTCAGGTCAAAATGGCACTAGATTGGCTTCACAATGATAAAGC AGAATTTCGCCTTTTTGCTGCTGTCTTAATTTTAAAAGAAGTGGCAGAAAATGCCTCTACAGTATTCAATGTTCACGTACCTGAATTTGTCGATGCAATC TGGGTTGCACTGAGGCATCCAACATTGGCAATTAGAGAGAGAGCTGTGGAGGCGCTGCGTGCTTGCCTTCGAGTTATCGAGAAGCGTGAGACACGTTGGC GTGTGCAGTGGTATTATCGTATGTTTGAGGCTACACAAGATGGATTGGGTAAAAATGCTCCTGTTCACAGCATACATGGTTCTTTGCTTGCTGTTGGAGA GCTCTTGAGGAATACTGGTGAGTTTATGATGTCAAGGTACAGAGAAGTTGCTGACATTGTTCTTAGATACCTCGAGCATCGAGATCGACTTGTTCGCCTT AGCATAACTTCATTGCTACCACGCATTGCTCACTTTCTGCGGGATAGATTTGTTACAAACTACTTAGAGATATGCATGAATCATATTCTTGCAGTGCTAA GAATACCAGCTGAACGTGGGAGTGGATTCATTGCCCTTGGGGAGATGGCTGGTGCTTTGGATGGGGAACTTGAACATTATTTGCCGACAATTACAGCTCA CTTACGCGATGCAATTGCTCCACGCAGGGCCAAACCCTCACTTGAGGCTTTGGCTTGTGTTGGAAATATTGCAAAAGCCATGAAAACTGCTATGGAACCT TATGTCCGCAGCCTTTTGGATGTCATGCTCTCTGCTGGGCTCTCTCCCACGCTTGTTGAAGCCCTTGAGCAGATAAGTGATAGTATTCCATCATTGCTGC CGACTATTCAAGAGCGGCTGCTGGATTGCATTTCGTTAGCTCTTTCGAAGTCCCATTTTTCTCAGTCAAGGGCAGCTATTCATACTGTTCGAGGGAGTAT GACGAATGCACCTCAGCAAGTATCGGACCTCAGTGGTTCAGCACTGGTGCAACTTGCTTTGCAGACGCTAGCTCGCTTTAATTTTAAGGGGCATGAACTT CTTGAGTTTGCCAGAGAATCAGTGGTTGTATATTTGGATGATGAAGATGGAGCTACCCGGAAAGATGCTGCACTTTGTTGCTGTAAATTAGTTGCAAATT CCTTTTCTGCCATGGTATCTACACAGGTTGGTTCTGGCAGGTCCAATCGTACTGGGGGAAAGCGATGGCGTCTTGTCGAGGAGCTTGTGGAAAAGCTTCT CATTGCAGCTGTTGCAGACGCGGATGTCACTGTTCGCCAATCTATCTTTTCCTCTCTTCATGGAAATAGAGGTTTTGATGATTTTCTAGCACAAGCTGAT ATTCTCAGTGCAGTTTTTGCTGCTTTGAATGACGAGGATTTTGACGTTAGAGAGTATGCAATCTCTGTGGCCGGGAGACTGTCAGAGAAGAATCCTGCAT ATGTTCTTCCTGCACTCCGTCGTCATCTCATACAGCTGTTGACCTATCTAAAACAGAGTGCAGATAACAAATGCAGAGAAGAAAGTGCAAAGTTATTAGG TTGTTTGATACGTAATTGTGAACAACTTGTACTTCCATACATTGCTCCAGTACACAAGGCACTTGTGGCAAGACTTCTTGAAGGCACAGGAGTAAATGCC AATAATGGTATCATTAGTGGAGTTCTTGTAACTGTCGGAGATCTTGCTAGAGTGGGTGGTTTTGCTATGAGGCAATATATTTCAGAACTTATGCCTCTGA TAGTCGAAGCTTTGTTAGATGGAGCAGCAGCAACAAAGCGTGAAGTGGCTGTTGCAACTCTTGGGCAAGTTGTTCAGAGCACTGGGTATGTCATAACTCC ATATACTGAGTATCCACAGTTACTTGGCTTACTCCTCAAATTGTTGAATGGTGAATTAGGGTGGACTACTAGACGTGAAGTACTGAAGGTTCTTGGCATC ATGGGAGCTTTGGATCCCCACGTGCATAAACGAAACCAACAAAACTTGCCTGGTTCACATGGTGAGGTTGCCCGTGCAGCCAGTGATTCAGGTCAACACA TCCCATCAATGGATGAACTACCTATGGACCTTTGGCCATCTTTTGCTACATCAGAAGATTATTACTCAACGGTTGCAATCAACTCCCTCATGCGAATTCT AAGGGATCCTTCACTTGCTAGCTACCACCAAAGGGTGGTCGGATCTCTTATGTTCATATTTAAGTCAATGGGCCTTGGCTGTGTACCATATTTACCTAAG GTTTTGCCTGATCTCTTTCACACTGTTCGAACATGTGATGATTGTCTTAAAGACTTTATAACTTGGAAGCTTGGAACTCTGGTATCTATTGTGCGCCAGC ACATTCGTAAATATCTCCCTGAATTGCTCTCTCTAATATCTGAATTGTGGTCATCCTTCAGCTTGCCAGCTCCTATTCGTCCTCCTCGTGGCTTTCCAGT TTTGCATTTAGTGGAACAGCTTTGCTTGGCTCTCAACGATGAATTCAGAAAGCATCTTCCTGTCATTTTGCCTTGTTGTCTTCAAGTTCTAAGTGATGCC GAAAGGTGTAATGACTATAGCTATGTTCTAGATATACTTCACACGCTTGAAGTGTTTGGTGGGACATTGGATGAACATATGCATCTACTTCTTCCTGCGC TCATTCGACTGTTTAAAGTGGATGCTTCTGTGGATATAAGACGGGCTGCCATCAAAACTTTGACGAGATTGATCCCTTGTGTTCAGGTTACCGGTCACAT TTCTGCTCTTGTGCATCACCTGAAGTTAGTGTTGGATGGGAAGAATGATGAACTCCGGAAAGATGCTGTTGATGCACTCTGTTGTTTAGCTCATGCATTA GGGGAGGATTTCACCATTTTCATCCCATCAATCCACAAACTCTTGCTGAAGCATCGATTGCGGCATAAAGAATTTGAAGAAATTGAAGGACGCTTTAGGA GACGTGAGCCTATAATCTTGGGGAGTACAGCTGCACAAAGATTGAGCAGACGACTTCCAGTGGAGGTTATTAGTGACCCTTTAAATGATATGGAAAATGA TCCTTATGAAGATGGTATTGACATGCAACGACATCTTAGAGGCCATCAGGTTAATGATGGTAGATTACGTACTGCTGGAGAGGCTTCTCAGCGCAGTACA AGAGAAGATTGGGCAGAGTGGATGAGGCATTTGAGCATTGAACTTCTAAAGGAGTCTCCTTCTCCAGCATTACGAACCTGTGCAAGGCTTGCACAGTTAC AGCCTTTTGTTGGACGAGAGTTATTTGCTGCTGGTTTTGTTAGCTGCTGGGCACAACTAAATGAGGCTAGTCAGAAACATTTGGTACGGAGTTTGGAGAT GGCATTTTCATCCCCAAATATTCCTCCAGAGATTCTAGCAACACTTCTTAACTTGGCAGAGTTCATGGAACATGATGAGAAACCTCTACCTATAGACATC CGCCTTCTTGGCGCTCTTGCAGATAAGTGTCGTGCATTTGCCAAGGCTTTACATTATAAAGAAATGGAATTTGAAGGTTCACGCTCCAAGAAGATGGATG CCAATCCTGTTGCTGTAGTTGAAACTCTCATTCATATAAATAATCAGCTACACCAGCACGAGGCTGCTGTTGGAATATTGACCTATGCCCAACAACTCTT GGATGTTCAACTTAAGGAGTCATGGTATGAGAAGTTGCAACGTTGGGATGATGCTCTCAAAGCATACACTGTCAAAGCCTCCCAAGTTTCGAGTCCACAT CTTGTACTGGAAGCTACATTAGGGAGGATGCGTTGCCTTGCTGCATTAGCTCGTTGGGAAGAGCTTAACAACCTATGCAAGGAATATTGGACACCAGCTG AGCCATCCGCTCGATTGGAAATGGCTCCAATGGCTGCCAGCGCTGCTTGGAACATGGGTGAATGGGATCAGATGGCAGAATATGTGTCTCGGTTAGATGA TGGTGATGAAACCAAAATTCGGGGTTTGGGGAATACTGCTGCTAGTGGTGATGGAAGTAGCAACGGCACATTTTTCAGGGCTGTGCTATTAGTTCGTAAA GAGAAGTATGATGAAGCTCGTGAGTATGTCGAGAGAGCTAGGAAGTGCTTGGCAACTGAGCTTGCTGCTTTGGTTCTGGAAAGCTATGAACGTGCTTACG TCAATATGGTCCGTGTTCAGCAGCTGTCAGAACTAGAGGAGGTCATTGACTATTGTACACTTCCTGCGGGAAATCCTGTTGCTGAAGGACGGCGGGCCCT TATTCGAAATATGTGGACAGAGAGGATACGAGGAGCAAAGAGAAATGTTGAGGTCTGGCAACTTCTTTTGGCTGTAAGAGCGCTTGTACTGCCTCCAACG GAAGACATTGATAATTGGCTCAAGTTTGCTTCTCTTTGTCGAAAAAGTAATCGGATTAGTCAGGCTAGATCCACTTTGGTTAAACTTTTACAGTATGATC CTGAGACAAGTCCTGAAAATGTGCGATACCATGGACCTCCTCAAGTAATGCTGGCGTACTTGAAATATCAATGGTCACTTGGGGAGGATCACAAGCGAAA AGAAGCATTTGCTAGGTTGCAGGATTTGGCCATAGAGCTTTCAAGTGCCCCAAATATGCAATCAATCACACCAATAAGTTTAATGGGCAGCACGGGTCAA AATGTTCATCTCCTGGCACGTGTGTATCGTACACTTGGAGCCTGGCAGTGGACACTTTCTCCTGGTTTGGATGATGATTCCATACAAGAGATTCTTTTAT CATTCAGGAATGCCACCCAGTATGCAACAGAATGGGGAAAAGCATGGCACTCATGGGCTTTGTTCAATACAGCAGTGATGTCACAGTATACATTACAAGG GTTACCAAATGTAGCCTCACAGTTTGTTGTTTCTGCGGTCACTGGATATTTTCATTCAATAGCCTGTGCAGCAAATGCTAAAGGGGTTGACGATAGTTTA CAGGATATACTCCGCCTTCTTACCTTGTGGTTCAACCATGGAGCTAGTGCAGAAGTTCAGATGGCACTGCAGAAAGGATTTTCTCATGTTAATATCAACA CGTGGCTTGTTGTTCTACCTCAAATTATTGCCAGGATACATTCAAATACCCATGCTGTGAGAGAACTAATTCAATCACTACTTGTGCGAATTGGACAAAG TCATCCACAGGCTCTTATGTATCCTCTTCTTGTGGCTTGTAAATCTATAAGCAATTTACGTAAAGCAGCTGCTGAGGAAGTGGTAAACAAAGTTCGAAAG CATAGTGGTGTGCTTGTGGATCAGGCACAACTTGTATCGACGGAATTAATTAGAGTCGCTATACTTTGGCATGAAATGTGGCATGAGGGACTGGAAGAAG CAAGTCGTTTATATTTTGGTGAACATAACATTGAGGGAATGCTAAAGGTGCTAGAGCCTCTGCATAAAATGCTCGAGGAGGGTGCTGTGAAGGAGAATAT TACTATAAAAGAGAGAGCATTCATTGAGGCATACCGGCATGAATTGTTAGAGGCATGGGACTGTTGCATGAAGTACAAGAGAACTGTAAAAGAGGCGGAG CTTACACAGGCATGGGATCTATATTATCATGTCTTCAGACGAATAGACAAGCAGCTTCAAGTCATGACAACTCTTGACCTGCAGTCTGTTTCTCCTGAGC TGGTAGAATGCCGTAATTTGGAGCTTGCTGTTCCTGGAACATATCGTGCTGATTTACCAGTAGTAACAATAGCATCATTTGCACCTGAGCTTGTTGTCAT AACATCAAAACAGCGACCCCGGAAATTGACTATTCATGGGAGCGATGGGGAAGATCATGCCTTCTTACTGAAGGGACATGAAGATTTGCGCCAAGATGAA CGTGTAATGCAGCTGTTTGGATTGGTGAATACTCTGCTGGAGAATTCAAGAAAAACTGTCGAGAAGGATTTGTCTATTCACCGATATGCTGTAATTCCAT TATCTCCAAACAGTGGGTTAATTGAATGGGTTCCTAATTGTGACACACTACACCATCTCATTCGAGAATATAGGGATGCCAGAAAGATCACCCTAAATCA AGAGCACAAATACATGCTCAGTTTCGCTCCAGATTATGACAATTTACCACTCATAGCTAAAGTTGAAGTCTTTGAGTATGCTCTTGACAATACTGAAGGG AATGACCTGGCCAGGGTTCTTTGGTTAAAAAGTCGCACTTCTGAGGTATGGCTAGAAAGGCGAACAAATTACACACGGAGTTTAGCAGTCATGAGCATGG TTGGTTACCTTCTTGGCTTAGGTGATCGACACCCTAGTAACCTTATGCTGCATCGCTACAGTGGGAAGATCTTGCATATTGACTTTGGAGATTGCTTTGA AGCTTCAATGAACCGGGAAAAGTTTCCTGAGAAGGTTCCTTTCCGTTTGACAAGAATGCTTCTGAAAGCTATGGAGGTTAGTGGTATAGAGGGCAATTTC CGCTCTACTTGTGAAAATGTGATGCAAGTTCTCCGAACACACAAGGATAGTGTTATGGCCATGATGGAGGCTTTTGTTCATGATCCCCTCATCAATTGGC GCCTTTTCAACTTTAATGAGGTCCCACAAATGTCAATGTTCACCAATAGTCATGTCCCTGCTGTTGTGAATGCTGAGGAATCTGCTCCTAGTAGAGAGCT CCCTCAACCTCAACGCAGTGCTCGTGAGAGGGAACTTCTTCAGGCTGTTAATCAGCTTGGTGACGCTAATGAAGTTTTGAATGAACGTGCTGTGGTTGTC ATGGCCCGGATGAGTAATAAACTGACTGGACGTGATTTCTCCACTCCTTCATTTACTGCAAGCTCTATCCAACATGCAGTAGATCACAGCTCCTTAATTT CTGGAGATACTCGTGAAGTAGATCATGGCTTATCTGTTAAATTGCAAGTTCAGAAATTAATTATTCAAGCCACATCACATGAAAATCTGTGCCAAAATTA TGTTGGGTGGTGTCCTTTTTGGTGA
AA sequence Show only first row Show all	>Potri.001G289200.1 pacid=42792284 polypeptide=Potri.001G289200.1.p locus=Potri.001G289200 ID=Potri.001G289200.1.v4.1 annot-version=v4.1 MASTSQSLRFLVGPATTAPGGGSFDALNRILADLCTRGNPKEGATLALRKHLEEEARDISGEAFPRFMDHLYERISSLLESNEVAENLGALRATDELIDV ALGENASKVSKFAIYMRSVFEVKRDPEVLTHASRVLGHLARAGGAMTADEVEFQVKMALDWLHNDKAEFRLFAAVLILKEVAENASTVFNVHVPEFVDAI WVALRHPTLAIRERAVEALRACLRVIEKRETRWRVQWYYRMFEATQDGLGKNAPVHSIHGSLLAVGELLRNTGEFMMSRYREVADIVLRYLEHRDRLVRL SITSLLPRIAHFLRDRFVTNYLEICMNHILAVLRIPAERGSGFIALGEMAGALDGELEHYLPTITAHLRDAIAPRRAKPSLEALACVGNIAKAMKTAMEP YVRSLLDVMLSAGLSPTLVEALEQISDSIPSLLPTIQERLLDCISLALSKSHFSQSRAAIHTVRGSMTNAPQQVSDLSGSALVQLALQTLARFNFKGHEL LEFARESVVVYLDDEDGATRKDAALCCCKLVANSFSAMVSTQVGSGRSNRTGGKRWRLVEELVEKLLIAAVADADVTVRQSIFSSLHGNRGFDDFLAQAD ILSAVFAALNDEDFDVREYAISVAGRLSEKNPAYVLPALRRHLIQLLTYLKQSADNKCREESAKLLGCLIRNCEQLVLPYIAPVHKALVARLLEGTGVNA NNGIISGVLVTVGDLARVGGFAMRQYISELMPLIVEALLDGAAATKREVAVATLGQVVQSTGYVITPYTEYPQLLGLLLKLLNGELGWTTRREVLKVLGI MGALDPHVHKRNQQNLPGSHGEVARAASDSGQHIPSMDELPMDLWPSFATSEDYYSTVAINSLMRILRDPSLASYHQRVVGSLMFIFKSMGLGCVPYLPK VLPDLFHTVRTCDDCLKDFITWKLGTLVSIVRQHIRKYLPELLSLISELWSSFSLPAPIRPPRGFPVLHLVEQLCLALNDEFRKHLPVILPCCLQVLSDA ERCNDYSYVLDILHTLEVFGGTLDEHMHLLLPALIRLFKVDASVDIRRAAIKTLTRLIPCVQVTGHISALVHHLKLVLDGKNDELRKDAVDALCCLAHAL GEDFTIFIPSIHKLLLKHRLRHKEFEEIEGRFRRREPIILGSTAAQRLSRRLPVEVISDPLNDMENDPYEDGIDMQRHLRGHQVNDGRLRTAGEASQRST REDWAEWMRHLSIELLKESPSPALRTCARLAQLQPFVGRELFAAGFVSCWAQLNEASQKHLVRSLEMAFSSPNIPPEILATLLNLAEFMEHDEKPLPIDI RLLGALADKCRAFAKALHYKEMEFEGSRSKKMDANPVAVVETLIHINNQLHQHEAAVGILTYAQQLLDVQLKESWYEKLQRWDDALKAYTVKASQVSSPH LVLEATLGRMRCLAALARWEELNNLCKEYWTPAEPSARLEMAPMAASAAWNMGEWDQMAEYVSRLDDGDETKIRGLGNTAASGDGSSNGTFFRAVLLVRK EKYDEAREYVERARKCLATELAALVLESYERAYVNMVRVQQLSELEEVIDYCTLPAGNPVAEGRRALIRNMWTERIRGAKRNVEVWQLLLAVRALVLPPT EDIDNWLKFASLCRKSNRISQARSTLVKLLQYDPETSPENVRYHGPPQVMLAYLKYQWSLGEDHKRKEAFARLQDLAIELSSAPNMQSITPISLMGSTGQ NVHLLARVYRTLGAWQWTLSPGLDDDSIQEILLSFRNATQYATEWGKAWHSWALFNTAVMSQYTLQGLPNVASQFVVSAVTGYFHSIACAANAKGVDDSL QDILRLLTLWFNHGASAEVQMALQKGFSHVNINTWLVVLPQIIARIHSNTHAVRELIQSLLVRIGQSHPQALMYPLLVACKSISNLRKAAAEEVVNKVRK HSGVLVDQAQLVSTELIRVAILWHEMWHEGLEEASRLYFGEHNIEGMLKVLEPLHKMLEEGAVKENITIKERAFIEAYRHELLEAWDCCMKYKRTVKEAE LTQAWDLYYHVFRRIDKQLQVMTTLDLQSVSPELVECRNLELAVPGTYRADLPVVTIASFAPELVVITSKQRPRKLTIHGSDGEDHAFLLKGHEDLRQDE RVMQLFGLVNTLLENSRKTVEKDLSIHRYAVIPLSPNSGLIEWVPNCDTLHHLIREYRDARKITLNQEHKYMLSFAPDYDNLPLIAKVEVFEYALDNTEG NDLARVLWLKSRTSEVWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLLKAMEVSGIEGNF RSTCENVMQVLRTHKDSVMAMMEAFVHDPLINWRLFNFNEVPQMSMFTNSHVPAVVNAEESAPSRELPQPQRSARERELLQAVNQLGDANEVLNERAVVV MARMSNKLTGRDFSTPSFTASSIQHAVDHSSLISGDTREVDHGLSVKLQVQKLIIQATSHENLCQNYVGWCPFW

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G50030		TOR	target of rapamycin (.1.2)		Potri.001G289200 [exp]	0	1	Pt-TOR.1
AT1G08730		PCR43, ATXIC, X...	MYOSIN XI C, Myosin family pro...		Potri.002G041800 [exp]	1.41	0.8647
AT3G28030		UVR1, UVH3	UV REPAIR DEFECTIVE 1, ULTRAVI...		Potri.017G070500 [exp]	1.41	0.8652
AT3G06670			binding (.1.2)		Potri.008G107300 [exp]	4.24	0.8578
AT1G09910			Rhamnogalacturonate lyase fami...		Potri.005G151500 [exp]	4.58	0.8109
AT5G24740			Protein of unknown function (D...		Potri.001G455600 [exp]	4.89	0.8569
AT1G58230			binding (.1)		Potri.002G111000 [exp]	6.70	0.8404
AT5G44180	HD		Homeodomain-like transcription...		Potri.007G135500 [exp]	7.48	0.8101
AT3G14470			NB-ARC domain-containing disea...		Potri.001G261300 [exp]	8.36	0.7845
AT3G50380			Protein of unknown function (D...		Potri.007G034900 [exp]	13.41	0.8117
AT1G77620			P-loop containing nucleoside t...		Potri.002G084700 [exp]	14.83	0.7728

Compare expression of checked genes

Potri.001G289200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.