Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G13750 2098 / 0 EMB2597, NOV NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) AT1G08300 237 / 5e-65 NVL no vein-like (.1) AT3G48770 143 / 2e-33 DNA binding;ATP binding (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G103100 [exp] 140 / 9e-33 AT3G48770 1796 / 0.0 DNA binding;ATP binding (.1) Potri.015G102200 [exp] 139 / 2e-32 AT3G48770 1833 / 0.0 DNA binding;ATP binding (.1) Potri.015G103000 [exp] 139 / 3e-32 AT3G48770 1719 / 0.0 DNA binding;ATP binding (.1) Potri.012G103700 [exp] 137 / 8e-32 AT3G48770 1783 / 0.0 DNA binding;ATP binding (.1) Potri.015G102700 [exp] 135 / 5e-31 AT3G48770 1842 / 0.0 DNA binding;ATP binding (.1) Potri.015G102401 [exp] 131 / 1e-30 AT3G48770 771 / 0.0 DNA binding;ATP binding (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016661 [exp] 2704 / 0 AT4G13750 2109 / 0.0 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Lus10037831 [exp] 287 / 1e-85 AT4G13750 149 / 7e-39 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Lus10004567 [exp] 150 / 1e-35 AT3G48770 1691 / 0.0 DNA binding;ATP binding (.1) Lus10022572 [exp] 119 / 1e-28 AT4G13750 95 / 2e-21 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Lus10017105 [exp] 76 / 2e-13 AT1G04910 767 / 0.0 O-fucosyltransferase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0236 [poplar] [flax] PDDEXK PF13020 [poplar] [flax] DUF3883 Domain of unknown function (DUF3883)
Representative CDS sequence Show only first row Show all	>Potri.001G317200.3 pacid=42792615 polypeptide=Potri.001G317200.3.p locus=Potri.001G317200 ID=Potri.001G317200.3.v4.1 annot-version=v4.1 ATGCACGGCCACCGTCCTCCCTACCGGCCCGGCGGCCGCGGGCAACCACCTCAACGACATCCACTACAACAAGAACTACCAACAGAACTTCTTACTTTCA ATCCGAATTTTGTCCCTCTCCAAGACCCAAATTTTTTTCTCCATACCTTCACCAATGCTTTACTCCAACAAAACTTCCCAATGCAAAACCCTAATTTCCC AATCCAAAACCCTAACTTTTTTCTCCCTCCACAACAACAAATACAATATCGTCAACAACAGCATCAAGAGCCGCCGCCACCAGGAGCACCACCTCCACCA GAACAACAAGAGCAGCAACAAGAGCCAGCAACACTACAACAAAACCTGCCTAAGTTTCCACAAAACCCTAAAAAGAAAGTGAAACAAAACAATAAAGAGC TACAATTAGAGAGAATTGATAGAGCAGTAGAGAAAGCACGGCAAGATCTTTCCGACGCAGAAGAGAATGTTTCTGCATGGAAAGTTTCACAGTCCGTGTT AGTGAATTTTCAAGCTGAGTCATGGGACTCTTTAGGGTTTAAAATGCAAGAGGTTCCTGCTCTTTTCCGGCTTATGGTCACTGAGAGCAAGATAAATGCT TTTATACATTGCTTTGTTGGGGTACGAAGAATTACATCAATTTATGATTTGGAAGTGGCAATATGCAAGAACGAGGGTATTGAAAACTTTGAAGAGCTGG GATTGGGGCCGTTGATGAGACACCCACTGGTATTGCATTATTTTTCGATGAAACCTGATGCTAGTGCAGAAGTTTTCAAGATAACCAGTGAGGAAATAAT TCTTTTGCTTAGTGAGTTTATGGACACATGTCAGAAGAAAGTTATTATTGTTGATGAATTTCTGCATTTTCTTTCAAAGAATTATCCAGTTAAGGGACCA GAAATGCTGGGCGTGCGTGTTCAAAGCTTGGGGACACATATTTCTTTTATTCGAGAAGCTAAAGCATCTGAAAATTCAACACAAAAGAAATGCCGAGAGA CATTAGCAAGGAATGGATCATTAAAGAAATGCCAAGAGGCAAGAGCAAGTGGACCTCGAGTACGATCTCAGAGGCATGAAGGGCGTTTTTCTTCAGAGAA GGAGCGACTGGAAGAACGTTTTTCTGCTGTAAGCGAGCGTATCAAATCATTTTCCCAGGAAAACTATGGTTTCTGTGGCAAACACATCAGATTTGTTTCA TCAAGCTCTGAAGATGAAAAAAGTGATGATGGAAAGAATGAAGATGAAATGACCAGCAATAATGTAGGCAGCCACTTAAGGTCTTCAGCACAGGCTATCA GCAATTCTGATCGGGTGAGTAGCTGTCCTTACCCTTCTGCAACTGAAGAGATGTCACGCCTAGGGTTGAAAGGTGAAACAGGTAGCCAATTTTCCCCTGA TTGTGGCAGCTCAAGGCCTAAAGAGAGTAACAGGTCATTTTTTAAGAAAAGAAAACTTGAAGATGCAAGTTGGAATGTATCTGTGCCTTCAAAATTGCTC AGAAGCAATAAGAAACATGCTCATCCTATTGATAATTTTGACAAGACTGAAGAGTTTGTTACTCCAAGTGAAGATGATATCTCACTATCTAGCAACGACC TGGGGGCCTTTATCACCACCTGGAAGGAGGCATGTAAGGATTACACTGTGGCAGAGATTCTTGAGAGAATGCTTCAGTACTACAAACCAACAGAAAGCAA GAAAGCTGTTCGCAAGCGAACTAATCGATGCATGAGAAGATTCAAATGCATATTTTCATCGTACCCATTTAACGGGATGCTCAATGTAGCTGTTGCATCT ATCAAGTGTGGAATGTGGGATAGCATTTATGATACTTTCCAAGTCACAAGTCAACCTGATTCAGCTAACACCCTTTCTGGAAATTGTTATGAATACGGAT GCATTGATGCTGAACCAGGTGAAAAGCAGGCACCAGTGGCCTGTGAGCGCTTACAGCAAACACGCAGTGTCCCAGTTGAAGAAATAATTGGGAAAATTAC TAGGCATTATGAGCTTGATAATGAGTATCAGAGCAATGGTAAATCAGTTCTGGAAAACAAACTCATTTCATTGAGGAAGCTGTCCAGTTGTGAGCTGTGG CTAGCAGACCAATTTGGTGTTAAGGAATTCGAGTCCCTTGGTCATGGGGAGTTTTTTGTTTTCCTGGAAAAACATGCCTCTCTATTTCCTGCTAAGTTAC AGAATCTCTTGTCTGGTGATAGATGTGGAAAGTCTACTTTGGAGGTCTCGATGCTCCAGGATCAGTTGATGGTACTAGTGTCCCAAGCTTCATATAGTCT GTGGGAGAATGAAACTATTACCAAACAGATGGTTGCTGCACTGCTTACTAGACAATTTCCACTACTTAGTTTTAACATTATGGAAAATGGTTCTATAGAA GATTTTCAACAAATTGTGGGAAAGTATAAGAACAATGTAATTTCAAAATGTGTCCTATTTTCTGCTACGTTGTCAGGAATGCATCATATTGGAGACTCAT TGCCTCTTAAGGAAGACAAGCTGGAAACCAGTGAAGTGAGAAACAAGGGTGACAACTTAGTGGCAGCATTTAATTCTGTTACATCTAAAGATGCAATTGA AGTTTTGGTTAGAGCACCGATGCTGTCTGACCTGAACTCATGGTCGCATTGGGACCTCAAATTTGCTTCCTCCCTTGGCCCTCTTGTAGGATGGTTGTTG AGTGAGGTCAATGATAAAGAATTGATGTGTCTGGTTACAAAGGATGGCAAGGTGATCAGAATTGATCAATCTGCTACTGCAGATTCATTCCTGGAAGCTG CACTTCAGAGATCATCTTTTCAAACAGCAGTGAAACTGTTATCCTTGCTCTCATTAGCTGGGGGGGGAAACCATGTTCCTTTGTCCCTTCTAAAATGTTA TGCTTGCCATGCCTTTGAAGTCATTTTGAATAATCATTCTGAAAATATGGAAGTAGAGGACAGCAGGAAATGTTTTTTGCATGGAAAGGCAATTGGAGTT GCTTCTAATAACTTGACTGTTGAATTGCAAAAAAAATCATTTAAAATCAACCAGGCATTACATTTTGCGTCAAGGTTTGTCCTTGATTGTCTTGGTTTTA TGCCTGCAGAATTTCATGGTTTTGCAGCTGATGTTTTGCTCTCAGGGATGCAATCTGTAATAAAAGAAGCTTCTTCAGTGATTTTGTATGAATGCAACCA AAAAGAACGCCTGATGCTTCATGAAATAGGATTATCTATCGGCGTAGTAGAGTGGATTGATGATTACCATGCATTTTGTTCTAATAGTACCACTGACTTG TCCGTATCTTCTGGGTCATCATGCTTGGAAACTGTGAGGTCTGAGATAAGCACAGAAAATGTGACTCTGAGAGAAGATGCACATTATGCAACTTGTACTC AAGTTAGATGCACAATTGATGATGCTGTAGTTTCCAGTGATGAAACTATCAGTGGTAGCTTAGAACAATCATCCGACCTTGACCAACACAAGGATGCAGC CATGGTAATTGAATCAATCAGGAAAGAAGAATTTGGTCTGGATGCAAATCTTTTCAATACAGAGAGCAGCATGTTGAAGAAGCAGCATGCACGCCTAGGG AGAGCTCTTCATTGTCTGTCCCAGGAACTGTATTCACAAGATTCACATTTTCTTCTTGAGCTTGTTCAAAATGCTGATGATAATATCTATCCTGAAAACG TGGAACCTACTCTGACATTCATCCTTCAAGAATCAGGTATTATTGTTTTGAATAATGAGCGAGGCTTTTCTGCTCAAAATATCAGAGCTCTTTGCGATGT TGGAAATTCAACCAAGAAAGGATCTGGTGGTGGATACATAGGGCAGAAAGGAATTGGCTTCAAATCAGTATTTCGGATCACAGATGCTCCAGAGATTCAT TCCAATGGATTTCATATCAAGTTTGACATAGGCGAGGGTCAGATTGGTTTTGTTTTGCCAACTGTTGTGCCTCCTTGTGATATCAACTTTTTCAGTAAGT TGGTGTCTATGCACCCTGATCAAATGAATAATAACAGTTGGAATACTTGTATTGTGCTTCCTTTCCGGTCAAAATCAGAAGATACTGCAACGAAGATGTT TTCAGATCTTCATCCTTCTTTGCTGCTTTTCCTTCAGCGCCTCCAGTGTATCATGTTCCGAAACAGGCTCAATGATTCACTCGTCATCATGCGGAAAGAA ATTTTGGAAGATGGTATTGTAAAGGTTTCATGTGGGAAAGATAAAATGTCATGGCTTGTAGCATCTCAGAAGTTGGAGGCACATGCTAGTCGTCCTAAAG TGCAAGGAACTGAAATTGCCATAGCATTTACGCTCGAGGAGTCAGATAATGGGGAGTATAATCCACGTTTGGACCAACAGCCTGTTTTTGCTTTTCTTCC TCTAAGAACTTATGGTCTGAAATTTATTCTTCAAGGCGATTTTATTCTACCTTCATCAAGAGAGGAAGTGGACAAGAATAATCCCTGGAATGAATGGTTG TTGACCAAGTTTCCTGGTTTGTTTGTTAGTGCAGAGAGATCTTTTTGTGCTCTCTCTTGTTTTAGGGAGAATCCAGGCAAAGCTGTGGCCACTTATATGA GCTTTGTTCCACTTGTTGGGGAGGTGCATGGTTTCTTTTCTGGCCTTCCTAAAGCAATTATTTTAGAATTACGAAGAACAAGCTGCCTGCTTATTGAAGG AGACAGGAGTAAAATGGTTCCTCCTTGCAGTGTTCTGAGAGGTTGGGATATGCAGTCTCGGAATGTTCTACCTGATAGATTGCTTCAAGAGTACCTTGGA CTTGGATTCTTGGACAAGAATATAGTTTTGTCTGATTCGCTTGCAAGGGCACTGGGTATCATGGAGTATGGGCCTGAAACATTAATTAAATTTATGACCC ATTTATGTCGCACAGAGAATGGCTTAAAGTTGATGGGCTTGGGTTGGCTATCGTCTTGGCTAAACACCCTCTATGCAATGCTATCTCGATCTTCTGGGCA AACTGATCTTATAGATAACCTTCAAAGTATTCCATTTATTCCCCTTTCAGATGGAACGTATAGCTCAGTGGATGTCAGTACAATTTGGTTACACTCTGAT ACCTTAAGCACTGGGTTTGATCGTGTGCACAGACTTGAGGCTTTTCCAAAATTGAATGCCAAACTTCAGATTGTAAATCCAGCCCTTCTTTCTGCATCAG CTGTCGATGAGACTTCAGTCGACAATGTTGCTAGGATGCTTCATAGAATTGGTGTGCAAGAACTGTCTGCACATGAAATTATTAAGGTTCATATTTTGCA AGCTATCTCTGATGACCGAATCACTGATAGGGACAAGGATCTAATGATAGATTATCTCTGCTTTATAATGATCCACCTACAATCTGGCTGCCCTAATTGT TGTGCTGAGAGGAAGCACATTATCTATGAGTTACAAAATAAAGCTTATATATTGACAAATCATGGATATAGAAGGCCTGTTGAGACATCAATTCATTTCA GCAGAGAATTTGGGAATCCTATTGATGTGAATGAATTAATTAATATAGCGGAAATGAGATGGCATGAGGTTGATATCAGCTATCTGAAGCATCCAGCTAA TAAATCCCTCTCAAATGGATTGACCAAGTGGAGGGAATTTTTGCAGGAAATTGGCGTTGCAGACTTTGTGCGAGTTATTCAGATTGAAAAGAGTGTTGCT GATTTATGTCATAGTGTTCCCAATTATATGGCATGGGATACAGACCTGATTTCCCCTGGATCAACAGCAAAAGATTGGGAATCCAGTGAGCTGGCGCATC TGTTGTTTATTTTGTCCACAAGTGGTGATGGAGAACGCTGTAAATATCTCTTGGAGGTCCTTGACACGCTATGGGATGATAACTTTAGTGACAAAGCTAC CATTTACTATGATTTAAAGTCCAGCGATACTGGGAGATCCTTCAAGTCTTCCTTTATAAGCAAAATCTGTGACTTTCAGTGGGTAGTTTCTAGCATGGAC AATGAACTTCACTACCCTAAAGATTTATTCTATGATTGTGATGCAGTACGCTCTATCCTTGGTGCTTCTGCGCCATATGCTCTTCCAAAGGTGAGAAGCA GAAAATTATTGAGTGAGCTTGGCCTGAAGACTGAAGTCACTATTGATGATGTTCTGGAAATTATAAAAGCATGGAGAAAATCTGAAACCACTTTCAAGGC CAGCATAGCACAAATGTCAAAATTATACACATTTATCTGGGATGAAATATCTTCTTCAAGGAACAAAGTTTCAGAGGCATTCCGTTCAGGACCATTTATT TTCGTTCCTAGTAAATCTGGCTCTAGTCACAAGGATTTGTTACCTGGTGTATTTTTGTCTGCTGAAGATGTATATTGGCATGATCCAACTGGCTCTATGG ACCGATTGAAAAAGATCCATTCTCAGGGCGGGTCTACAAGTGTTATTCAGTGCCTATTAAGCAAGATATTGTGCAATGTTTATCCAGGCCTTCATGACTT TTTTGTTAATGAGTGCGGAGTATCTGAAATCCCTACTTGCCATAGCTATCTTGATATTTTACTGCAGTTATCAACTGCTGTTTTGCCTTCACAAGCTGCT AGTGCAGTTTTCAAAGTCTTGTTGATGTGGACTGAGGGACTGGAATCTGGATCTCTAAGTACAGAAGATATCATTCACTTGAAAGAATGTCTGACAAAAT TGGATTGTACTGTACTGCCTACAGCACAAGATAAATGGGTTTCTTTGGACCCATCTTTTGGTCTGGTATGCTGGTCCGATGATAAAAACTTGAGGAAGAT ATTTAAGAATTTCAGTAATATAGAATTCTTGTACTTTGGCAATCTGAGTGGCAGTGAGCAAGAGATGCTTCAAACTAAAGTGTCTCTCCTCCTGCAAAAA TTGGGGATACCTGCTCTCTCAGAGGTTGTAACTCGTAAGGCAATATATGATGGTCCAGCAGACTCTAGCTTCAAAGCTTCATTGATTAACTGGGCTCTTC CTTATGCTCAGCGCTACATATATAGCACACACCCTGATAAATACTCTAAACTCAAGCAGTCTGGATTCAATAATCTAAAGCAACTGCAGGTTATTGCTGT TGATAAGTTATCCTACCACTATGCCATAAAAAAATGTCGCCTTGCTTCTAAGAGGCAAGAACAATGTAGCTGTCTCCTGGAGGGTAATACTTTGTACACA AGGTTGGAATCTGATACACATGCTTTGTTTTTGGAGCTATCTCGTTTATTCTTTGATGGTACTCCAGAATTGCACTTGGCAAATTTCCTTCATATGATTA CAACCATGGCTGAATCTGGCTCCACAGAGGAGCAAACAGAATTCTTCATTGTGAACAGCCAGAAGGTGTCAAAGCTTCCTGACGAAGAATCTTTGTGGTT ACTCTCCTCAACTCAGTCTTTGACAACGAATGAGGAATCGCTTCAAATAGATGTTTCTCCAACATCAATAAATGAACAGAAACCCTCAAACTTGAAGTTG AAAGCCAGTGTCAGTTCATATTGGCCACCTGCAGACTGGAAAACTGCACCAGATTTTCATAGCAGCCGATGTAGCATAAATGATGAGGAGATTGTCACAG AAGCAGTTAGTGTAGTTCCAGCTAAAAACAATGCGGATTTCACCGTTGAAAACAAAGCAGATGAGTTGCTAGAGTCTGATAATGTGGACACCCAGACTCC TAAGTTCAATGGTCCTGAATTGGGTCCATCTAAAATATTCAGGACAGATCAGCTTCGTCCTGGGACAGCTAATGCAATACAAGCAATGGCTACTGGGAGA GAAGGTGAGCAAGTTGCTTTCAACCATTTGACTCAAAAATTTGGTCAAGTCGTGAAGTGGGTTAATCAGGATAATGAGACCGGGTTACCCTATGACATGG TTATAGAAGTGGGAAGTAGTAAAGAGTACATTGAAGTTAAAGCTACAAGATCCGCTATGAAGAACTGGTTTGAAATATCATCTAGAGAGTGGCACTTTGC AGTTGAGAAGGGTGAATGTTTTAGCATTCTTCATGTACTTTTAGGTAATAATAAAGCTAGGGTTTCAACATTCAGAAATCCCGCAAGACAATGCCAATCA GGGAAGCTCCGATTGGTTGTTCTGATGCCCACTGTCTCTGAGACGTGGGAGGATGTTTCTCTGCTGACTTGA
AA sequence Show only first row Show all	>Potri.001G317200.3 pacid=42792615 polypeptide=Potri.001G317200.3.p locus=Potri.001G317200 ID=Potri.001G317200.3.v4.1 annot-version=v4.1 MHGHRPPYRPGGRGQPPQRHPLQQELPTELLTFNPNFVPLQDPNFFLHTFTNALLQQNFPMQNPNFPIQNPNFFLPPQQQIQYRQQQHQEPPPPGAPPPP EQQEQQQEPATLQQNLPKFPQNPKKKVKQNNKELQLERIDRAVEKARQDLSDAEENVSAWKVSQSVLVNFQAESWDSLGFKMQEVPALFRLMVTESKINA FIHCFVGVRRITSIYDLEVAICKNEGIENFEELGLGPLMRHPLVLHYFSMKPDASAEVFKITSEEIILLLSEFMDTCQKKVIIVDEFLHFLSKNYPVKGP EMLGVRVQSLGTHISFIREAKASENSTQKKCRETLARNGSLKKCQEARASGPRVRSQRHEGRFSSEKERLEERFSAVSERIKSFSQENYGFCGKHIRFVS SSSEDEKSDDGKNEDEMTSNNVGSHLRSSAQAISNSDRVSSCPYPSATEEMSRLGLKGETGSQFSPDCGSSRPKESNRSFFKKRKLEDASWNVSVPSKLL RSNKKHAHPIDNFDKTEEFVTPSEDDISLSSNDLGAFITTWKEACKDYTVAEILERMLQYYKPTESKKAVRKRTNRCMRRFKCIFSSYPFNGMLNVAVAS IKCGMWDSIYDTFQVTSQPDSANTLSGNCYEYGCIDAEPGEKQAPVACERLQQTRSVPVEEIIGKITRHYELDNEYQSNGKSVLENKLISLRKLSSCELW LADQFGVKEFESLGHGEFFVFLEKHASLFPAKLQNLLSGDRCGKSTLEVSMLQDQLMVLVSQASYSLWENETITKQMVAALLTRQFPLLSFNIMENGSIE DFQQIVGKYKNNVISKCVLFSATLSGMHHIGDSLPLKEDKLETSEVRNKGDNLVAAFNSVTSKDAIEVLVRAPMLSDLNSWSHWDLKFASSLGPLVGWLL SEVNDKELMCLVTKDGKVIRIDQSATADSFLEAALQRSSFQTAVKLLSLLSLAGGGNHVPLSLLKCYACHAFEVILNNHSENMEVEDSRKCFLHGKAIGV ASNNLTVELQKKSFKINQALHFASRFVLDCLGFMPAEFHGFAADVLLSGMQSVIKEASSVILYECNQKERLMLHEIGLSIGVVEWIDDYHAFCSNSTTDL SVSSGSSCLETVRSEISTENVTLREDAHYATCTQVRCTIDDAVVSSDETISGSLEQSSDLDQHKDAAMVIESIRKEEFGLDANLFNTESSMLKKQHARLG RALHCLSQELYSQDSHFLLELVQNADDNIYPENVEPTLTFILQESGIIVLNNERGFSAQNIRALCDVGNSTKKGSGGGYIGQKGIGFKSVFRITDAPEIH SNGFHIKFDIGEGQIGFVLPTVVPPCDINFFSKLVSMHPDQMNNNSWNTCIVLPFRSKSEDTATKMFSDLHPSLLLFLQRLQCIMFRNRLNDSLVIMRKE ILEDGIVKVSCGKDKMSWLVASQKLEAHASRPKVQGTEIAIAFTLEESDNGEYNPRLDQQPVFAFLPLRTYGLKFILQGDFILPSSREEVDKNNPWNEWL LTKFPGLFVSAERSFCALSCFRENPGKAVATYMSFVPLVGEVHGFFSGLPKAIILELRRTSCLLIEGDRSKMVPPCSVLRGWDMQSRNVLPDRLLQEYLG LGFLDKNIVLSDSLARALGIMEYGPETLIKFMTHLCRTENGLKLMGLGWLSSWLNTLYAMLSRSSGQTDLIDNLQSIPFIPLSDGTYSSVDVSTIWLHSD TLSTGFDRVHRLEAFPKLNAKLQIVNPALLSASAVDETSVDNVARMLHRIGVQELSAHEIIKVHILQAISDDRITDRDKDLMIDYLCFIMIHLQSGCPNC CAERKHIIYELQNKAYILTNHGYRRPVETSIHFSREFGNPIDVNELINIAEMRWHEVDISYLKHPANKSLSNGLTKWREFLQEIGVADFVRVIQIEKSVA DLCHSVPNYMAWDTDLISPGSTAKDWESSELAHLLFILSTSGDGERCKYLLEVLDTLWDDNFSDKATIYYDLKSSDTGRSFKSSFISKICDFQWVVSSMD NELHYPKDLFYDCDAVRSILGASAPYALPKVRSRKLLSELGLKTEVTIDDVLEIIKAWRKSETTFKASIAQMSKLYTFIWDEISSSRNKVSEAFRSGPFI FVPSKSGSSHKDLLPGVFLSAEDVYWHDPTGSMDRLKKIHSQGGSTSVIQCLLSKILCNVYPGLHDFFVNECGVSEIPTCHSYLDILLQLSTAVLPSQAA SAVFKVLLMWTEGLESGSLSTEDIIHLKECLTKLDCTVLPTAQDKWVSLDPSFGLVCWSDDKNLRKIFKNFSNIEFLYFGNLSGSEQEMLQTKVSLLLQK LGIPALSEVVTRKAIYDGPADSSFKASLINWALPYAQRYIYSTHPDKYSKLKQSGFNNLKQLQVIAVDKLSYHYAIKKCRLASKRQEQCSCLLEGNTLYT RLESDTHALFLELSRLFFDGTPELHLANFLHMITTMAESGSTEEQTEFFIVNSQKVSKLPDEESLWLLSSTQSLTTNEESLQIDVSPTSINEQKPSNLKL KASVSSYWPPADWKTAPDFHSSRCSINDEEIVTEAVSVVPAKNNADFTVENKADELLESDNVDTQTPKFNGPELGPSKIFRTDQLRPGTANAIQAMATGR EGEQVAFNHLTQKFGQVVKWVNQDNETGLPYDMVIEVGSSKEYIEVKATRSAMKNWFEISSREWHFAVEKGECFSILHVLLGNNKARVSTFRNPARQCQS GKLRLVVLMPTVSETWEDVSLLT

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G13750		EMB2597, NOV	NO VEIN, EMBRYO DEFECTIVE 2597...		Potri.001G317200 [exp]	0	1
AT5G60040		NRPC1	nuclear RNA polymerase C1 (.1....		Potri.001G341900 [exp]	1.00	0.9197
AT4G30990			ARM repeat superfamily protein...		Potri.001G318800 [exp]	3.16	0.9135
AT4G17610			tRNA/rRNA methyltransferase (S...		Potri.001G150900 [exp]	4.00	0.8636
AT2G40770			zinc ion binding;DNA binding;h...		Potri.019G060900 [exp]	4.24	0.9109
AT1G32490		EMB2733, ESP3	ENHANCED SILENCING PHENOTYPE 3...		Potri.015G008700 [exp]	6.00	0.8894
AT1G67120			ATPases;nucleotide binding;ATP...		Potri.017G039100 [exp]	6.32	0.8877
AT4G38760			Protein of unknown function (D...		Potri.009G130000 [exp]	7.07	0.8761
AT4G16420		PRZ1, ADA2B	PROPORZ1, homolog of yeast ADA...		Potri.006G017300 [exp]	7.41	0.8243
AT1G13040			Pentatricopeptide repeat (PPR-...		Potri.008G185000 [exp]	9.89	0.8682
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Potri.001G123400 [exp]	12.40	0.8831

Compare expression of checked genes

Potri.001G317200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.