Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G30990 1973 / 0 ARM repeat superfamily protein (.1.2) AT5G36722 48 / 2e-06 unknown protein AT5G36810 48 / 2e-06 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042447 [exp] 2344 / 0 AT4G30990 2101 / 0.0 ARM repeat superfamily protein (.1.2) Lus10026222 [exp] 2196 / 0 AT4G30990 2005 / 0.0 ARM repeat superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07539 [poplar] [flax] DRIM Down-regulated in metastasis
Representative CDS sequence Show only first row Show all	>Potri.001G318800.3 pacid=42788544 polypeptide=Potri.001G318800.3.p locus=Potri.001G318800 ID=Potri.001G318800.3.v4.1 annot-version=v4.1 ATGGCGACGCCGTCTCATGCTCGGGCGGTTAAGTCGCTCAACAAATCCCCGGGTCTCCATGGCCGCCGTTTTGTTTTCAAGACATTCTCACAGAGAATTG AAGAAATTGAAATTGATGTTTATTCAAGTCTTAATAAAATTAAGTCTGCCCCATCAGAGGGGTCCACTTTTATGCGGGACTGCCTTATCGAATTTAGGGA ATTAAATACAGCAGAAGATTTCATCTCATTTTACGAGGAGATGATGCCCTTTGTGCAAACATTACCTTTGGTGATATTACACAAAGAAACCATTTTTTCG CAACTTCTTTCTAGATTACAAGTGAAAGCACGACTATCAGTTGAAGCGATTCTCAGGTTGATTGCAGCTTTATGTAGAGATCTTCCTGATGACTTTGTCT CCTTTCTACCGAGGATTGTTGATTCATTGGTGTCTCTCCTCAAAAGTGGTGCTGATAGGGAGCCAGATATCATCGAGCAGATTTTCGTGGCATGGTCATA TATTCTGATGTATTTGCAAAAATCTCTTTTGGAAAACAATAGGCTTGTAGATGTGCTCAAGCTAACAGTAAAATTAAGATATTACCCTAAGGAGTATGTC CAAGAATTTATGGCAGCAACAACATCATTATTGCTGAGAAATGCTTCTGAGGGGCAGCTTAGGAAAGGTATTGCAAAGGTCATTCTTGAGGTTGTCAAGA AACCATTACCTGTGAAAAATTATGGAGCCAGCGCTTTGCTTTATTTTGTTATGAGAGGAACCATGTCAAGGCCTTATTCAAGACCGGATCGGGTACTGCA GCAGTTGACAAGCAAAAAAATATTCAGCATTGGTGATGAGTGTGATCAAGGTTCTAAAACTGTTGATGAAGTTCTAACTACAACCCTTCAACGTTTATGT GAGGAGCTAGAACCAAAGGAATTAGATTTTTTGTGGAATAGCCTATATCAGAAAATAGACTACTATGCAATCAATGATCACTTGCCATATCTAAGTCGCT TTTTGTCACTGCTTATATCAAGCGCCCAAATTAATGATGGCCACAAAGTTTCTGATTACCAACCTATGCTTGAATGTGTGAAAAACCTTTTTGAGAGGTT TATCATTCCTTATGTTGCTTTGAAGGGAGAAAACCATTTCTCTGAAGTTATTGATAAGGTTCTACAATTATTGCTATGCACTCTTGATGGGCTCAAGAGT TCCAATGATATGGCTACCATCTCGCATTGTTTGTTGCAATGGGCTCCTGCATTCAAGTTGAGGAATTCAAGCATTTTGACCTTTTTAAGTGAGCTAATGA AGAGAGACCCGTGCATACTATATGAATTCAGAGCTAATATCTTGAGTGCGATGAATGATTTAATAGAAACTTCACAGAAAGAGATTGTATTTCTGCTTTT GACTTTCTGTGAGAAACTGCAAATGGATCCTCTTAGATCCATCTTTTTAGATGGTTCACCTGAAGGACGATATTCAAGGATTACTGGTTTTCTGCAACAG ACAGTGCGCTTCTGGCTGGCTGTGATTGATAATATCGTTAATGGAAATGGCTCATTTACTCCAATTGAAAGGGGCGAGTTGACTCTGCTGTGGCAAGTTG TCTGCTGCTATCCTTACATGATGGACCTTCAAGAAATGCCATCCTTGTTAATGGATCTGATAGATGCACTTGATCGGCTTTTTATAATTGAGGCTGAAAA TATTGCAGGTTTTCCTAAACATACTTGGCAAAGCTTAATTGGTGCTTCTTTAAGTTCCTATTACAAATGCGGTAAAAAGTTTGAGCTTGAAGAAACAAGC AAAGTTCTGTGTCTTGCAAAAACATACAAGTCATCCTCGCAAGTATTGTCTGCTGTTGCTGATTATTTGGACCATGTGCATGGGTCAACACTGGAAGCAG ACACCAGCCATAAAATATATCATCCCGAGTTTGAAGGGAAGAAGGCTGTGGATGCATTTGATGTATTTGCTGATAATTTGTGCAATCCTGACAAGGGGAT TCGCGTTCCGACTCTAAGAATTTTGTGTCACTATGAACCTCAAGGTTGTCAAATGTCAGCTATAGACCAGCCACCTGAGAAGAAAATGAAAACAGAATTT TCTGAGACATGCCCCGAGGATAGTCAGAGCATTGATGTTCTTCAACTTCTTCTCTCGATCGAGGCAACTACACTTTCAATATCTACCAGCAGGAAAGTTG TCCTATTGATCTCTAGAATACAGATGGGGCTTTCTGCTGGAAGAATAGCTGAGGCTTATATACCCATTTTGTTGAGTGGGATGATTGGCATCTTCCATAA CCGTTTTAGTTATCAATGTGCTTCGGCATCTGAATGCCTTGCAGTTCTAATTGGCAAGCATGTTGCCCTTGCATGGGACAAATTTGTTTGTTATCTTGAA CATTGCCAATCTGTATTTCATATGTTTCATGATAAACCTGGAGGAAGTGCTGAATTGTCTGACCAGTCCAGTGACTTGGCTGAGTGTTCATTTGTCACTC CTGTATCTGATAGCACACCATGTGCCACTGTTCTATCTTCATTGCTTCAAACTCTGCAAAAAATTCCCTCTGTTGCTGAATCTCGTTCTCGACAAATAAT ACCTTTGTTCTTGAAGTTTTTGGGCTACAACAATAATGATCTTGCTAGTGTGGGATTATTCAATCCAGTTACTTGCAAAGGTAAGGAGTGGAAGGGCATC CTCAAAGAATGGTTAAACTTGCTGAAACTTATGAGGAACTCTAAGGCCTTCTACCAAAATCAGTTTGTAAAAGATGTTCTGCAAACAAGGCTCATTGATG AAGATGATGTTCATATACAAACGAGTGTCCTAGATTGCCTCTTAACCTGGAAAGATGATTTCTTGCTCCAATATGAGCAACATTTGAGAAACTTGATCAG TTCAAACCATTTAAGAGAAGAACTAATAACATGGAGTTTAAGCAGAGAATCTGCAGTCATTGAAGAGGGCCACAGAGCCAATCTTGTGCCTCTTGTTATT CTCCTCCTGATGCCAAAAGTGCGAAAACTGAAGATGCTTGCCTCTCGAAAGCACACAAGTATAAATCAACGAAAGGTGGTTCTTCGGTTCATAGCTCAAC TCGATGTTGGCGAGTTAACTCTTTTCTTTGTGTCATTATTAAAGCCCTTGCATATTTTACCGGAGGGAGTTGATAGTGCTGCAATTTTTTTTTGGAATTT ATGCAAGAGTTCTGTGGATGAATTTCAAACCTCTAATATCTTGAAGCATTTCACCATGGAAAAAATAATGGCCCTTTCTTGGAAGCAGAGGACTGGCTTT CTGCATGTTGTGGAAGATATTCTTGGAGTTTTTGATGAATCACGCACCAGACCTTTTCTGGATCTATTAATGGGATGTGTGGTTCGGTTATTGGGAAGCT GCACTGCAAGTCTTGATGCTGTGAAGGATGCATCTTCTGTAGTCGAAGATAATACTAGTGACAACCAGAAATTGCATGAGAACAACAATGCGATATTAAA TCAAGTAGCGAGAAGCACAGCTGTGAAGCAGTTTAAGGATATGCGGTCTTTATGCCTAAGAATTGTTTCCCTTGTTTTGAACAAGTATGATGATCATGAT TTTGGCGATGAATTCTGGGAATTGTTCTTCAAATCAGTGAAACCTTTAATTGACAGTTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACCAAGTTCATTGT TTTCATGCTTTTTGGCGATGAGTAGAAGTTCCCATCTTGTACCATTTCTGTTTAGAGAAAAGAATCTTGCTCCTAATATTTTTTCAATATTAACTATCCC AACAGCTTCCGAGGCTATTATATCTTGTGTTCTAAAGTTCATTGAGAATCTGTTGAATCTTGAAGATGATTTGGATGATGAAGACAATGCTGCACAAAAA CTTCTACTTCTGAACCTTGATGAACTCATCAACAGCTTGCACCATCTCTTTCAAAGTGATAAAGCAACCAAGAGATATCCGGGAGAGATTCAAATTAGAA TTTTCAAATTCCTATCGAAGTATATAAAGGATCAATTGCCAGCAAGGCAGCTTGTGGATATCTTGCTTTCATCATTAGCAATGAGATATAAAGATTCAGA TGTTTGCATTGAATATTTGCAAGTAGTTCGGGACATCATTCCAGTAGTAGGAAGTGAGAGTGGTTCAAAAATTCTTAAAGCAGTCTCTCCACTCCTTACT TCTGTTGGACTTGATGTGCGGTTGCCTATTTGTGATCTTCTTGATGCTCTTGCTAAAAGTGATCCTTCTTTCCTCTTTGTGGCAAAGCTTCTCCATGAAT TGAATGCAACCTCTGCCACTGAGATGGGTGGCCTTGATTATGATACAGTTTTCAAAGCTTATGAAAAAGTTGGTGTTGGTTTATTCTATACTATCCCAGT AGATCAAGCATTAGTTATTTTGTCGCATTGTGTGTATGATATGTCATCAGTTGACATAACTTTAAGGCACTGCGCTTATAGTTCATTGCTCTCATTTGTT GAATTTTCCTCTGCAATTCTTTGTGGAGAAGATCAAAATCAACCAGTGATAACAAACTGTGAAGGTTGTTGGACAAGGGCATCTATTCAGCGCACAATAA ATAAGTTTCTTTTGAAATATATGGGCAATGCAATGAAGGCAAGAAGTTCAGTTAGAAAGGAATGGATTGAATTGTTGCGAGATATGGTGTTGAAACTTCC AAAGGTGGCGAAGTTTAGTTCATTCAAAGCTCTGTGCTCTGAAGATGCTGAAGTAGATTTTTTCAATAATATTATTCACTTACAGAAGCGCATGATAGCA AGGGCTCTGTTGCGTTTTAAAACTGTTATCAGTGAAAGTACCGCATCAGAGGACATCTTAAATAAAATATTTGTCCCTCTTTTCTTCAATATGTTGCTTG AAGAACAAGGAGGAAAAGGAGAGCATATCAAATCTGCATGTTTGGAAGCTCTTGCCTCAATTTCTGCTCTCATGGAATGGAAGTCATATTATAACTTATT GACTAGGTGCTTTCAAGAAATGAATGTGCATCTAGACAAGCAGAAGATTTTGTTGCGCCTAATTTGCTCTATCTTGGACCAGTTTCATTTTTCACAAATT TGTTCAAGCCAAGAAGTCAAAGACCCTCCTGACAGTAGTTTAGCTGACACCTCTGATAGTTGTTCTATGGCTGTATCGCGCAAATGTGTTGGTGGTACTT CTTCAGCTATGGTACACAAAAACGGTACTTCTGTTGGGCTTTCTGAAATACTGGCATGCCTCCATAAAACTGTGCTCCCGAAGATACAAAAATTACTGGA CTCTGATTCTGACAAGGTCAATGCGAACATTAGCGTGGCAGCACTAAAAGTTCTAAAGTTGCTTCCGGGGGACACAATCGATTCACAACTTCCAAGTATC ATTCATCGCATCGCAAACCAATTAAAAAGTCGGATGGAAAGCATTCGCGATGAAGCTAGGCTTGCTTTGTCCGCTTGTTTAAAAGAACTTGGGCTGGAAT ATTTGCAGTTCATAGTCAGGGTTCTACGAGCTACCTTGAAGAGAGGATATGAACTCCATGTATTGGGATACAGTCTCAACTTTATCTTGTCAAAGTTTCT ATCAGGTCCTGTCTGTGGGAAGTTGGATTATTGTTTGCAAGATCTTCTTTCTGCTGTAGAGAATGACATTCTTGGAGATGTTGCTGAAGAGAAAGAGGTG GAAAAGCTTGCTTCCAAAATGAAAGAAACTAGGAAGCAAAAGTCATTTGAAACCTTGAAAATGATTGCACAAAACATAACATTCAAAACCCACGCTTTAA AACTTCTTTCACCTGTCACAACTCACATGCTGAAGCATCTGACACCAAAGGTGAAACCTAGATTGGAAAGTATGCTAAATCACATAGCGGCTGGCATTGA GCATAATCCATCAGCTGATCAGACTGACCTATTCATTTTCATATATGGCCTCATTGAAGATTGGATCAAAGAAGAAAATGGTTCTTTCAAGAATTCTTCC AGTGCAGTAGCAAAATTACACAGTAGAGGTGATGTGAGTCAGAAAACAGTTTCTTCAGGCCGAGTTGTTGGCACTAAATCAGTGTGCTCACATCTTATTG CTCTGTTTGCTCTTCGATTATTCCAAAACCGTATAAAGAGAGTGAAATTGGATAAAAATGCTGAGCAGCTTTTATCAATGCTGGATCCATTCGTTGAACT GCTAGGCAATTGCTTGAGTTCTAATTATGAAGATATTTTATCCGCTTCCCTTACATGCCTTACTCCACTGGTAAGACTGCCGTTGCCATCCCTTACATCC CAGGCTGATAGAATAAAGGTGACATTGTTGGATATTGCCCAAAGTTCTGTAAACAGTAGCAGTCCTTTGATGCAATCATGCCTACGATTGTTAATTGCAC TTCTGTGGAGTACTAATGTTACCCTTTCCTCGGAACAATTGCATCTGCTAATTGAATTTCCACTTTTCGTTGATCTGGAAAGGAATCCTTCTTTCATCGC CCTCTCACTCCTAAAAGCAATTGTGAATCGGAAGCTAGTTGTTCCCCAGATGTATGATTTGGCTATTCGAGTTGCAGAACTGATGGTCACAAGCCAAGTG GAGTCGATTCGTAAGAAATGCAGTCAGGTCCTGTTGAAATTCCTACTTCATTACCGTCTTTCAAAGAAAAACTTGCAACAACATTTAGATTTTCTGCTCA ATAATTTAAGCTATGAGCATTCAACTGGAAGAGAAGCTGCACTTGAAATGCTTCATGCAATAATTATCAAATGTGGAAAAATCAATATCGAAGAATTCAA TTCTCAAGAAGGATCTCAGAAGAAGTTTTTGGAGAAACATGGACAATCTTTATTTATACATTTGGTCCAGTGCTTGGCGAATGATAGTGATAATAAAGTT CGGTTGATGACCGGTGCAGTTATAAAGCTTCTCATTCGACATATAAGCTCAGATGGATTTAATTCCATTATGGACTTCATTCTATCTTGGTACATGGATG AGAAGCAGAACCTGCAAAGTCTCGGTGCTCAGACCATGGGGTTACCTGTTGAGATTTGTTTAGACATGAAGGAAGAAGTTGAACGCATGAAGGAAGAAGT GAAGGGCATGAAGGAAGAAGTAGAGGACATGTCAGATAAAATTGGGGTCTTGACTAGAAAAGCTGAGGCCATGAAGAAGGAAATTGAGGACAAGTCTAAA AGAATTGAGGGCATGAAGGAAGAAGTTAAGGGCATGGAGGAAGAAGTTGAGGTTCTGGCTAAAAAAGACAAGGTTATGAAGGAAGACATTGAGGATAAGA AGAAAAATGTTAAGGACAAGTCTGCAAAAATTGAGGGCATAGAAAGAAAAATTGAGGCCACAAAGAAAAAAATTGAGGTTTTGAAAAAAAGCTTGGATAA GTACATTCATAGTGCATTGCCAGTGAGCAAAAAAATCTTGCAGTCTGCTGTAAAAGTTGTTGCTAGTGAGCCTCTACTAGATCATTCTGATGCAGCCATT CCTTTGTGGAAAGAGGCGTATTACTCACTGGTTATGCTAGAGAAGATTCTAAATTGTTTCCATGATCTATGCTTTGAAAGGGACCTTGAGGATATATGGG AAGCAATATGTGAGTTGCTCTTGCATCCTCACACATGGTTGCGCAACGTTTCAAGTCGTCTTGTTGCTTTTTACTTTGCCAGTGCAAACAAGGCCATCAA GCAAGACCATGAGAAGTCATTGGGAATGTTTTTCCTTATGAGGCCAAGTAGAGTGTTTATGATAGCTGTCTCCCTCTGCTGCCAGCTGGAAACAGAAGTT ATTGATGATGCCATGAGCAACCTGATCACAAATAATCTTGCCACTGCAAGTTTTGCGACACATATTTTGATGGGAAGAATGGAATGTGTTGATCCTTGTA AATTGTGGTCTGCCCTTGACCAACATGAACAAGGGCAATTTCTTGAGGCTTTCCAGCTGCTTGATACAAGAAAAGGAAGAGGCATGCTTTTACATGTGAT CTCTGGTGTACGTCGCCATGACAATGTGAATCAGTCTGATAATCTTCAGTATTTTCTAGTCTCTAACTTGCTTAAAAAAATGGGAGATATTGCTCTTCTA AAGGATGCTATTCAGATGGAAACTGTCTTCAATTGTTTTAAAGAGTTTGTGGCTCATTTCTCAAAGGAAGAAAAAGAGTTTGCAGCTCACATCAATCAGG ATGACTGCCAACATTATGCATTTGACATGCTGCTGCCCTTATATAAAGTTTGCGAAGGATTTGCTGGAAAAGTTGTCCCAGATAACTTGAAGCAGTTAGC GCAAGAGGTTTGTGATCGCATACGAAAAGTTATAGGCATGGAGAATTTTGTACAGGTTTATAGCAACATACGAACGAATATCAAGGTAAGGAGGGAAAAG AGGAAGCGGGAGGGAAAAGTCATGGCTGTTACTAACCCTGTGCGGCATGCCAAGAGGAAGCTACAGGTTGCAGCTAAGAATCGTGCCCACAAGAAAAGGA AGATAATGACAATGAAAATGAAAATGGGAAGATGGACGCGTTAA
AA sequence Show only first row Show all	>Potri.001G318800.3 pacid=42788544 polypeptide=Potri.001G318800.3.p locus=Potri.001G318800 ID=Potri.001G318800.3.v4.1 annot-version=v4.1 MATPSHARAVKSLNKSPGLHGRRFVFKTFSQRIEEIEIDVYSSLNKIKSAPSEGSTFMRDCLIEFRELNTAEDFISFYEEMMPFVQTLPLVILHKETIFS QLLSRLQVKARLSVEAILRLIAALCRDLPDDFVSFLPRIVDSLVSLLKSGADREPDIIEQIFVAWSYILMYLQKSLLENNRLVDVLKLTVKLRYYPKEYV QEFMAATTSLLLRNASEGQLRKGIAKVILEVVKKPLPVKNYGASALLYFVMRGTMSRPYSRPDRVLQQLTSKKIFSIGDECDQGSKTVDEVLTTTLQRLC EELEPKELDFLWNSLYQKIDYYAINDHLPYLSRFLSLLISSAQINDGHKVSDYQPMLECVKNLFERFIIPYVALKGENHFSEVIDKVLQLLLCTLDGLKS SNDMATISHCLLQWAPAFKLRNSSILTFLSELMKRDPCILYEFRANILSAMNDLIETSQKEIVFLLLTFCEKLQMDPLRSIFLDGSPEGRYSRITGFLQQ TVRFWLAVIDNIVNGNGSFTPIERGELTLLWQVVCCYPYMMDLQEMPSLLMDLIDALDRLFIIEAENIAGFPKHTWQSLIGASLSSYYKCGKKFELEETS KVLCLAKTYKSSSQVLSAVADYLDHVHGSTLEADTSHKIYHPEFEGKKAVDAFDVFADNLCNPDKGIRVPTLRILCHYEPQGCQMSAIDQPPEKKMKTEF SETCPEDSQSIDVLQLLLSIEATTLSISTSRKVVLLISRIQMGLSAGRIAEAYIPILLSGMIGIFHNRFSYQCASASECLAVLIGKHVALAWDKFVCYLE HCQSVFHMFHDKPGGSAELSDQSSDLAECSFVTPVSDSTPCATVLSSLLQTLQKIPSVAESRSRQIIPLFLKFLGYNNNDLASVGLFNPVTCKGKEWKGI LKEWLNLLKLMRNSKAFYQNQFVKDVLQTRLIDEDDVHIQTSVLDCLLTWKDDFLLQYEQHLRNLISSNHLREELITWSLSRESAVIEEGHRANLVPLVI LLLMPKVRKLKMLASRKHTSINQRKVVLRFIAQLDVGELTLFFVSLLKPLHILPEGVDSAAIFFWNLCKSSVDEFQTSNILKHFTMEKIMALSWKQRTGF LHVVEDILGVFDESRTRPFLDLLMGCVVRLLGSCTASLDAVKDASSVVEDNTSDNQKLHENNNAILNQVARSTAVKQFKDMRSLCLRIVSLVLNKYDDHD FGDEFWELFFKSVKPLIDSFKQEGSSSEKPSSLFSCFLAMSRSSHLVPFLFREKNLAPNIFSILTIPTASEAIISCVLKFIENLLNLEDDLDDEDNAAQK LLLLNLDELINSLHHLFQSDKATKRYPGEIQIRIFKFLSKYIKDQLPARQLVDILLSSLAMRYKDSDVCIEYLQVVRDIIPVVGSESGSKILKAVSPLLT SVGLDVRLPICDLLDALAKSDPSFLFVAKLLHELNATSATEMGGLDYDTVFKAYEKVGVGLFYTIPVDQALVILSHCVYDMSSVDITLRHCAYSSLLSFV EFSSAILCGEDQNQPVITNCEGCWTRASIQRTINKFLLKYMGNAMKARSSVRKEWIELLRDMVLKLPKVAKFSSFKALCSEDAEVDFFNNIIHLQKRMIA RALLRFKTVISESTASEDILNKIFVPLFFNMLLEEQGGKGEHIKSACLEALASISALMEWKSYYNLLTRCFQEMNVHLDKQKILLRLICSILDQFHFSQI CSSQEVKDPPDSSLADTSDSCSMAVSRKCVGGTSSAMVHKNGTSVGLSEILACLHKTVLPKIQKLLDSDSDKVNANISVAALKVLKLLPGDTIDSQLPSI IHRIANQLKSRMESIRDEARLALSACLKELGLEYLQFIVRVLRATLKRGYELHVLGYSLNFILSKFLSGPVCGKLDYCLQDLLSAVENDILGDVAEEKEV EKLASKMKETRKQKSFETLKMIAQNITFKTHALKLLSPVTTHMLKHLTPKVKPRLESMLNHIAAGIEHNPSADQTDLFIFIYGLIEDWIKEENGSFKNSS SAVAKLHSRGDVSQKTVSSGRVVGTKSVCSHLIALFALRLFQNRIKRVKLDKNAEQLLSMLDPFVELLGNCLSSNYEDILSASLTCLTPLVRLPLPSLTS QADRIKVTLLDIAQSSVNSSSPLMQSCLRLLIALLWSTNVTLSSEQLHLLIEFPLFVDLERNPSFIALSLLKAIVNRKLVVPQMYDLAIRVAELMVTSQV ESIRKKCSQVLLKFLLHYRLSKKNLQQHLDFLLNNLSYEHSTGREAALEMLHAIIIKCGKINIEEFNSQEGSQKKFLEKHGQSLFIHLVQCLANDSDNKV RLMTGAVIKLLIRHISSDGFNSIMDFILSWYMDEKQNLQSLGAQTMGLPVEICLDMKEEVERMKEEVKGMKEEVEDMSDKIGVLTRKAEAMKKEIEDKSK RIEGMKEEVKGMEEEVEVLAKKDKVMKEDIEDKKKNVKDKSAKIEGIERKIEATKKKIEVLKKSLDKYIHSALPVSKKILQSAVKVVASEPLLDHSDAAI PLWKEAYYSLVMLEKILNCFHDLCFERDLEDIWEAICELLLHPHTWLRNVSSRLVAFYFASANKAIKQDHEKSLGMFFLMRPSRVFMIAVSLCCQLETEV IDDAMSNLITNNLATASFATHILMGRMECVDPCKLWSALDQHEQGQFLEAFQLLDTRKGRGMLLHVISGVRRHDNVNQSDNLQYFLVSNLLKKMGDIALL KDAIQMETVFNCFKEFVAHFSKEEKEFAAHINQDDCQHYAFDMLLPLYKVCEGFAGKVVPDNLKQLAQEVCDRIRKVIGMENFVQVYSNIRTNIKVRREK RKREGKVMAVTNPVRHAKRKLQVAAKNRAHKKRKIMTMKMKMGRWTR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G30990			ARM repeat superfamily protein...		Potri.001G318800 [exp]	0	1
AT1G67120			ATPases;nucleotide binding;ATP...		Potri.017G039100 [exp]	1.00	0.9290
AT5G60040		NRPC1	nuclear RNA polymerase C1 (.1....		Potri.001G341900 [exp]	2.44	0.9155
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Potri.001G123400 [exp]	2.44	0.9260
AT5G65560			Pentatricopeptide repeat (PPR)...		Potri.006G124900 [exp]	2.64	0.9101
AT4G13750		EMB2597, NOV	NO VEIN, EMBRYO DEFECTIVE 2597...		Potri.001G317200 [exp]	3.16	0.9135
AT1G19290			Pentatricopeptide repeat (PPR)...		Potri.014G040200 [exp]	4.69	0.9052
AT1G06710			Tetratricopeptide repeat (TPR)...		Potri.007G123600 [exp]	5.65	0.9085
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Potri.002G159900 [exp]	6.48	0.9111	Pt-CRP.3
AT5G09950			Tetratricopeptide repeat (TPR)...		Potri.013G129500 [exp]	6.63	0.9137
AT4G20060		EMB1895	EMBRYO DEFECTIVE 1895, ARM rep...		Potri.018G118800 [exp]	8.66	0.8880

Compare expression of checked genes

Potri.001G318800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.