Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP94.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G01900 598 / 0 CYP94B2 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) AT3G48520 568 / 0 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) AT5G63450 557 / 0 CYP94B1 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) AT1G34540 407 / 8e-138 CYP94D1 "cytochrome P450, family 94, subfamily D, polypeptide 1", cytochrome P450, family 94, subfamily D, polypeptide 1 (.1) AT3G56630 402 / 7e-136 CYP94D2 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) AT2G27690 382 / 5e-128 CYP94C1 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) AT1G63710 329 / 6e-107 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT4G00360 325 / 4e-105 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G13140 322 / 3e-104 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT5G23190 321 / 2e-103 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G096800 [exp] 655 / 0 AT3G48520 611 / 0.0 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.002G042100 [exp] 424 / 3e-144 AT3G48520 451 / 1e-154 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.005G220700 [exp] 422 / 2e-143 AT3G48520 436 / 4e-149 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.002G042200 [exp] 422 / 3e-143 AT5G63450 442 / 3e-151 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Potri.005G220900 [exp] 421 / 3e-143 AT3G48520 414 / 2e-140 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.016G031700 [exp] 410 / 8e-139 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.010G236700 [exp] 402 / 7e-136 AT2G27690 576 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) Potri.009G145400 [exp] 397 / 9e-134 AT2G27690 622 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 389 / 1e-130 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041562 [exp] 687 / 0 AT3G01900 597 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10012531 [exp] 678 / 0 AT3G01900 592 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10014741 [exp] 403 / 4e-136 AT5G63450 461 / 1e-158 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10014742 [exp] 401 / 3e-135 AT5G63450 451 / 8e-155 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033853 [exp] 394 / 1e-132 AT5G63450 474 / 7e-164 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033852 [exp] 373 / 3e-124 AT5G63450 457 / 4e-157 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10036024 [exp] 344 / 1e-112 AT3G56630 380 / 3e-127 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Lus10017394 [exp] 313 / 5e-100 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10010193 [exp] 309 / 7e-99 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 307 / 4e-98 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.001G331100.1 pacid=42793030 polypeptide=Potri.001G331100.1.p locus=Potri.001G331100 ID=Potri.001G331100.1.v4.1 annot-version=v4.1 ATGGCAAACCCCATGTCTCTCTTCGTCCTGCAGGTCGTATCATTCTTGTTGTTGTATATATTGCTTCTCTACCTTTTCAACGTAATTCTGAGCAGATTTC GGCGTGTTCAAGAGTTCTCCGGCCACAAGCCTCCGACGTATCCTATAATAGGATGTTTGATCTCATTCTACAAGAACCGGGGTCGTTTGTTGGATTGGTA TACTGAACTGCTTGCAGAATCAGCTACCAACACAATTGTAGTGCACCGCCTTGGTGCACGAAGAACCATCGTGACAGCTAACCCCAAAAATGTCGAGTAT ATGCTCAAAACCAACTTTAACAACTTCCCCAAAGGGCAGCCCTTCACTGAAATTCTTGGGGACTTTCTTGGTTATGGTATATTCAACGTGGACGGGGAGC TTTGGCGCGCACAACGCAAGTTCGCCAGCCATGAGTTTTCCGCGAAATCCTTACGAGAGTTCTTCATGATCACATTGGAGGAAGAAGTAGAGAAGGGGCT GCTACCAATTTTGGAATCATTGGCGGTGACAGCAGAGGTGGTGGATTTGCAGGAGTTGCTAAGACGGTTTGCGTTCAACATGGTACTTAAGGTTTCACTA GGGATTGATCGATGCTGTTTAGATCCTTCTCAACCAGTTCCACCTCTTACAAGAGCTTTCGACGAGGCATCGGAGATATGCGCAAAACGAGGAGCTGCTC CCCTCTTCATAGTTTGGAAGATGAAGAAATGGCTCGGGATTGGATCTGAGCGACAGCTTAAGAGCGCGGTTGAAGAGGTTCATCGATATGTTTCTGAGAT AATCATCAACAAGAAAAGGATGATTGAAGAGGGAGAGAGTCGCAGTGAAGACCTCCTCTCTCGGCTTATACTGGCCGGCCATGAGGAGGAGGTCATAAGA GACATGGTGATAAGCTTCATCATGGCAGGCAGGGATACAACCTCAGCTGCAATGACATGGCTATTCTGGTTGCTCTCTTGTCATCCAGATATAGAGAAGG AAGTGGTGAAAGAGACGAGACTTCTAATGGAAAGAATGTTAGATTATGACTCATTGAAGGAGTTAAATCTGTTGAAGGCATGCCTATGCGAGTCAATGAG GCTCTACCCACCCATAGCCTGGGACTCGAAGCATGCCGTAGTCAGTGACTTGTTGCCAGACAACACTCCCGTCCGGGCAGGAGACAGGGTGACCTACTTC CCCTACGGGATGGGAAGAATGGAAGCGCTATGGGGCGAGGACTGTTTCAAGTTCAAACCAGACCGGTGGTTTGTTGAGGCAAATGACAGGAGAGAACTCC AGGAGGTATGTCCTTGCAAATTCCCAATCTTTCAAGCTGGTCCCAGGGTGTGTCTTGGGAAAGAAATGGCCTTCATTCAGATGAAGTACGTGATGGCTTC AATTCTTGACCGGTTCAAGATTAAACCCCTAAGTTCAGCTAGCCCAGTCTTTGTCCCCCTCTTGACCGCTCACATGGCCGGCGGACTAGAAGTTTTGGTC CAAAAGAGGACTCAGACGACGAGCATAAACAAGCAATTAAATTAG
AA sequence Show only first row Show all	>Potri.001G331100.1 pacid=42793030 polypeptide=Potri.001G331100.1.p locus=Potri.001G331100 ID=Potri.001G331100.1.v4.1 annot-version=v4.1 MANPMSLFVLQVVSFLLLYILLLYLFNVILSRFRRVQEFSGHKPPTYPIIGCLISFYKNRGRLLDWYTELLAESATNTIVVHRLGARRTIVTANPKNVEY MLKTNFNNFPKGQPFTEILGDFLGYGIFNVDGELWRAQRKFASHEFSAKSLREFFMITLEEEVEKGLLPILESLAVTAEVVDLQELLRRFAFNMVLKVSL GIDRCCLDPSQPVPPLTRAFDEASEICAKRGAAPLFIVWKMKKWLGIGSERQLKSAVEEVHRYVSEIIINKKRMIEEGESRSEDLLSRLILAGHEEEVIR DMVISFIMAGRDTTSAAMTWLFWLLSCHPDIEKEVVKETRLLMERMLDYDSLKELNLLKACLCESMRLYPPIAWDSKHAVVSDLLPDNTPVRAGDRVTYF PYGMGRMEALWGEDCFKFKPDRWFVEANDRRELQEVCPCKFPIFQAGPRVCLGKEMAFIQMKYVMASILDRFKIKPLSSASPVFVPLLTAHMAGGLEVLV QKRTQTTSINKQLN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G01900		CYP94B2	"cytochrome P450, family 94, s...		Potri.001G331100 [exp]	0	1	CYP94.2
AT1G03430		AHP5	histidine-containing phosphotr...		Potri.014G136200 [exp]	1.41	0.9000	Pt-HPT2.1
AT2G27510		ATFD3	ferredoxin 3 (.1)		Potri.008G020100 [exp]	11.95	0.7995	Pt-PETF.6
AT3G23730		XTH16	xyloglucan endotransglucosylas...		Potri.011G077320 [exp]	16.27	0.8745
AT5G66200		ARO2	armadillo repeat only 2 (.1)		Potri.005G113000 [exp]	17.14	0.8389
AT5G14020			Endosomal targeting BRO1-like ...		Potri.017G062000 [exp]	17.54	0.8802
AT3G46540			ENTH/VHS family protein (.1)		Potri.008G055600 [exp]	18.49	0.8736
AT2G30130	AS2	PCK1, LBD12, AS...	PEACOCK 1, Lateral organ bound...		Potri.009G076900 [exp]	19.59	0.8733
AT1G56320			unknown protein		Potri.005G019200 [exp]	21.23	0.8674
AT5G57620	MYB	ATMYB36	myb domain protein 36 (.1)		Potri.018G095900 [exp]	21.54	0.8835
AT1G14700		PAP3, ATPAP3	purple acid phosphatase 3 (.1....		Potri.008G139100 [exp]	22.13	0.8653	Pt-PAP8.3

Compare expression of checked genes

Potri.001G331100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.