Plant FIBer expression Database

Pt-MRP3.1 (Potri.001G362300) [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol Pt-MRP3.1
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT3G13080 2008 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
AT3G13100 1804 / 0 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1)
AT3G13090 1783 / 0 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1)
AT1G04120 1398 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
AT3G60160 1367 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
AT3G60970 1205 / 0 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1)
AT3G59140 1035 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
AT3G62700 1028 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
AT2G47800 1019 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1)
AT3G21250 972 / 0 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.001G362200
[exp]
2364 / 0 AT3G13080 1952 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.003G198401
[exp]
2240 / 0 AT3G13080 1827 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.T125806
[exp]
2240 / 0 AT3G13080 1826 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.T124606
[exp]
2221 / 0 AT3G13080 1830 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.003G197200
[exp]
2216 / 0 AT3G13080 1832 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.003G197101
[exp]
2214 / 0 AT3G13080 1862 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.T124406
[exp]
2204 / 0 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.003G197100
[exp]
2195 / 0 AT3G13080 1842 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Potri.T124506
[exp]
2190 / 0 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10013201
[exp]
1553 / 0 AT3G13080 1498 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Lus10022858
[exp]
1399 / 0 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
Lus10018027
[exp]
1363 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
Lus10042023
[exp]
1343 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
Lus10030718
[exp]
1342 / 0 AT3G13080 1249 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Lus10030716
[exp]
1293 / 0 AT3G13080 1256 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Lus10024965
[exp]
1258 / 0 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
Lus10027567
[exp]
1090 / 0 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Lus10039320
[exp]
1088 / 0 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Lus10011498
[exp]
986 / 0 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0023 P-loop_NTPase PF00005 ABC_tran ABC transporter
CL0241 ABC_membrane PF00664 ABC_membrane ABC transporter transmembrane region
Representative CDS sequence
>Potri.001G362300.3 pacid=42791395 polypeptide=Potri.001G362300.3.p locus=Potri.001G362300 ID=Potri.001G362300.3.v4.1 annot-version=v4.1
ATGCATCTCTTTGATTCGACAAACACTGCTACTGCTCTCCTGAACAATCTTTTAAATTCATCTTCCAGCTTAATGGATTCAGCTACTTATTTTCTCCTTA
AACCCATTTTCCTACGTGGCTTTACTGCTTCATTGCACCTTGTTTTGTTACTTGCTCTGTTTGTCTCCTTTGTGCTTAAAAAGCTCAGGGTGGGTGATGG
TGTTCAAGGTTCTAAAGAGAGGTTTAGCAATAACAAGAGGTTTTTTTTCTACAAACAGACTCTCTTCTGTTCTTTAGGTGTTTCATCGCTTAATCTTGTC
CTGTCTTTAGTCAGCTACTTCTATTGGTATACAAATGGTTGGTCTGATGATAAACTAGTGACCCTTTTAGATTTTGTGCTTACTGCACTGTCTTGGGCTG
CACTTTCAGTTTATCTTCACACCCAACTCTTCAATTCAGGTGAAACAAAGTTCCCTTTTTTGTTGAGAGTCTGGTGGGCTCTTTTTTTCTCAATTTCTTG
TTATTGTCTTGTTGTAGATTTTCTTGTTTTTCACAAACATGGGTCCTTTGAGATACAGTATTTAGTATCTGATTTAGTCTCTGTTTTCACTGCCTTTTTT
CTCTGTTATGTGGGGTTTTTGAGAAATGAGTGTCAAGATACTCTTCTTGAACAACCCCTTTTGAATGGTGATTCTAGTTCAATTAATGGTTTAGAGTCAA
GTAAGTCCAGAGGAGGTGATAGTTTGACCCCTTATGCAAATGCTGGCCTTTTCAGTATTCTTACCTTCTCTTGGATGGGTTCTCTGATTGCTTTTGGCAA
TAAGAAAACTCTAGACCTTGAAGATGTTCCTCAACTTCATAGTGTTGATAGTGTAGTTGGAGCATTCTCAGTTTTTAAAAATAAGCTTGAGTCAGATAGT
GGTGCTGCTAGTAGAGTTACGGCTTTCAAGCTCCTCAAGGCATTGCTCTTGTCTGCTTGGAAAGAAATTCTATTGACAGCTTTGTTGGCAATAATATACA
CCTCAGCTTCTTATGTTGGTCCTTACCTTATTGATTCTTTTGTTCAATGCCTTGATGGGCGAGGAGAATACAAAAATCAGGGATATATTTTAGCTTCGAC
CTTTTTTGTTGCCAAGGTTGTAGAGTGCCTCTCACAGAGGCACTGGTTCTTTAGGTTGCAGCAAATTGGAATTAGGCTCCGTGCTGTAGCAACCACGATG
ATTTACAACAAGGCTTTAACCCTTTCCAGTCAGTCAAAGCAGGGCCAGACTAGTGGGGAAATCATCAACATCATGACGGTTGATGCAGAGAGAATTAGTG
ATTTTAGTTGGTACATGCATGATCCGTGGTTGGTCATCTTGCAAGTTGGTTTGGCCTTGCTGATACTGTACAAAAATCTGGGGCTTGCAACAGTTTCTAC
TTTTGTTGCAACAATAGTTGTCATGTTGTTAAACTATCCACTGGGGAGATTGCAAGAGCATTTTCAAGACAAGTTAATGGAATCAAAAGATAAAAGAATG
AAGGCTACCACTGAGATTTTAAGGAATATGAGGATTCTCAAGTTGCAGGGGTGGGAAATGAAGTTTTTGTCTAAGATTCTTGATCTTAGGCAAGTAGAGA
CAGGATGGTTGAAGAAATATGTTTATAATTCAGCAATGATCAGTTTTGTCTTCTGGGGGGCTCCTAGTTTGGTGGCTGTGGCCACTTTTGGTACTTGCAT
GCTTATCGGAACCCCTCTTGAATCAGGGAAGATCTTATCTGCACTTGCAACATTCAGGATTCTTCAAGAGCCAATCTATAATCTTCCTGATACGGTTTCT
ATGATAGTTCAGACCAAGGTTTCCCTGGACAGAATTGCATCTTTCATTAGTCTTGATGACTTGAAGAATGATGTGTTAGAGAAGCTTCCAATAGGTAGTT
CTGATACGGCAGTTGAGATCGTGGATGGGAATTTCTCTTGGGACGTTTCTTCGCCTAGTGCAACATTGAAAAATATAGACTTCCAAGTGTTCCATGGCAT
GAGAGTTGCTGTTTGCGGAACAGTTGGTTCAGGCAAGTCAAGCTTACTTTCCTGCATTTTGGGTGAAGTACCCCAAATCTCAGGGACTCTCAAGATATGT
GGGACAAAAGCCTACGTTGCCCAGTCACCTTGGATACAGAGTGGCAAGATTGAAGAGAACATATTGTTTGGTAAGGATATGGACAGAGAGAGATACGAAA
GGGTACTGGAGGCATGTTCCCTGAAGAAGGACCTTGAAATTCTGTCATTTGGTGATCAAACAGTTATTGGTGAGAGGGGAATCAATTTAAGCGGTGGACA
GAAGCAAAGAATTCAGATAGCACGGGCTCTGTACCAAGACGCTGATATCTATCTTTTCGATGACCCTTTCAGTGCTGTGGATGCTCATACAGGATCTCAT
TTATTTAAGGAAGCTTTGCTTGGGCTTTTGAATTCGAAAACTGTTATTTACGTTACTCATCAAGTCGAGTTCTTACCTGCTGCTGATCTAATTTTGGTCA
TGAAAGATGGAAGGATCACACAAGCTGGAAAATATGATGACATTCTCAATTCAGGATCTGATTTCATGGAACTTGTTGGTGCACACAAGGCAGCTTTATC
AGCATTTGATTCCAAACAAGCAGAATCGGCTTCTGAAAATGAAAGTGCCGGGAAGGAAAACAGTAGCGGGGATAGGATTTTGCAAAAAGAAGGAAATAAG
GATTCTCAAAATGGTAAAGAAGATGTGGTAGCTGGGCCAAAAGCACAGCTCATTCAAGAAGAAGAGAGAGAGAAAGGTAGTGTTGGGTTTCCTATCTACT
GGAAGTTTATCACAACAGCATATGGTGGAGCTCTTGTGCCCTTCATATTATTGGCACAGATTCTCTTTCAGATCCTTCAAATTGGTAGCAATTATTGGAT
GGCATGGGCAACTCCTGTGTCAAAGGATATGAAACCTGTTGTCAGTGGATATACTCTAATAATGGTCTATGTATGTCTGGCTATCGGAAGTTCATTTTGC
ATCCTCGCTAGAGCTACACTTCTTGTAACAGCAGGGTACAAAACTGCAACTCTACTCTTTAATAAAATGCATCTGTGCATTTTTCGTGCCCCCATGTCCT
TTTTCGACTCAACTCCTAGTGGAAGAATCCTAAACAGAGCTTCTACTGATCAAAGTGCGGTTGAAACACAAATTCCATATCAAGTTGGAGCACTTGCCTT
CTCATCTATTCAACTTCTGGGAATCATTGCAGTTATGTCTCAGGTGGCTTGGCAAGTTTTTATCGTTTTCATCCCTGTCATTGCTGCCTGCATCTGGTAT
CAGCGATATTATATACCTTCAGCAAGAGAACTTTCAAGGTTGGTTGGGGTATGCAAAGCTCCAGTTATCCAACATTTTTCTGAAACAATTTCAGGAGCAG
CAACTATCAGGAGCTTTGATCAACAATCAAGATTCCAAGAAACAAATATGATAGTAACAGATGCATATTCTCGGCCCAAATTTCATGCTGCTGCTGCAAT
GGAATGGCTTTGCTTCCGCCTTGATATGTTCTCTTCTATTACGTTTGCTTTCTCTTTGGTTTTCTTAGTCTCTTTTCCAAAGGGAATTGATCCAGCCATT
GCGGGCTTAGCAGTGACATATGGACTCAACCTGAACATGTTACAAGCTTGGGTAATATGGAATTTATGCAATTGTGAGAACAAAATCATATCAGTAGAGA
GAATTCTTCAGTACATGTCCATTCCTAGTGAGCCTCCTCTCATAATAGAAGCAAGCAGGCCAAACCGTTCTTGGCCATCACATGGTGAAGTTGAAATTAA
TAATCTGCAGGTCCGGTATGCCCCACATATGCCACTTGTTCTGCGTGGTCTCACTTGCACTTTCCCAGGAGGTATGAAAACTGGTATTGTAGGGAGGACA
GGCAGTGGCAAATCGACTCTCATACAGACTCTTTTCCGTATTGTTGAACCTGCTGCTGGTCGCATTATGATTGATGATATTGATATCTCATTGATTGGAC
TGCATGACTTGAGGTCAAGACTAAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGGACTGTACGAAGCAATCTGGACCCCCTTGAAGAGTACACGGA
TGAACAGATTTGGGAGGCTCTGGATAAGTGCCAACTAGGAGATGAAGTTAGAAAGAAGGAAAGGAAGTTAGACTCCACAGTGATCGAGAATGGAGAGAAC
TGGAGTATGGGTCAGAGGCAGCTAGTATGTCTTGGGCGTGTGCTACTGAAGAAAAGTAAGGTGTTGGTCCTTGACGAAGCTACTGCCTCAGTTGACACGT
CTACCGATAATCTAATTCAGCAAACTTTAAGGCAGCACTTCTCCGATTGTACTGTTATAACCATCGCACATCGGATAACTTCTGTTCTTGATAGTGACAT
GGTTTTGCTTTTGAGTAATGGGCTCATTGAGGAATATGATTCTCCAGCAAGATTGTTAGAGAACAAATCTTCGTCATTTGCACAACTTGTTGCAGAGTAC
AGAGTCAGGTCAGATACCGGTTTTGAGAAATTTAACTGA
AA sequence
>Potri.001G362300.3 pacid=42791395 polypeptide=Potri.001G362300.3.p locus=Potri.001G362300 ID=Potri.001G362300.3.v4.1 annot-version=v4.1
MHLFDSTNTATALLNNLLNSSSSLMDSATYFLLKPIFLRGFTASLHLVLLLALFVSFVLKKLRVGDGVQGSKERFSNNKRFFFYKQTLFCSLGVSSLNLV
LSLVSYFYWYTNGWSDDKLVTLLDFVLTALSWAALSVYLHTQLFNSGETKFPFLLRVWWALFFSISCYCLVVDFLVFHKHGSFEIQYLVSDLVSVFTAFF
LCYVGFLRNECQDTLLEQPLLNGDSSSINGLESSKSRGGDSLTPYANAGLFSILTFSWMGSLIAFGNKKTLDLEDVPQLHSVDSVVGAFSVFKNKLESDS
GAASRVTAFKLLKALLLSAWKEILLTALLAIIYTSASYVGPYLIDSFVQCLDGRGEYKNQGYILASTFFVAKVVECLSQRHWFFRLQQIGIRLRAVATTM
IYNKALTLSSQSKQGQTSGEIINIMTVDAERISDFSWYMHDPWLVILQVGLALLILYKNLGLATVSTFVATIVVMLLNYPLGRLQEHFQDKLMESKDKRM
KATTEILRNMRILKLQGWEMKFLSKILDLRQVETGWLKKYVYNSAMISFVFWGAPSLVAVATFGTCMLIGTPLESGKILSALATFRILQEPIYNLPDTVS
MIVQTKVSLDRIASFISLDDLKNDVLEKLPIGSSDTAVEIVDGNFSWDVSSPSATLKNIDFQVFHGMRVAVCGTVGSGKSSLLSCILGEVPQISGTLKIC
GTKAYVAQSPWIQSGKIEENILFGKDMDRERYERVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSH
LFKEALLGLLNSKTVIYVTHQVEFLPAADLILVMKDGRITQAGKYDDILNSGSDFMELVGAHKAALSAFDSKQAESASENESAGKENSSGDRILQKEGNK
DSQNGKEDVVAGPKAQLIQEEEREKGSVGFPIYWKFITTAYGGALVPFILLAQILFQILQIGSNYWMAWATPVSKDMKPVVSGYTLIMVYVCLAIGSSFC
ILARATLLVTAGYKTATLLFNKMHLCIFRAPMSFFDSTPSGRILNRASTDQSAVETQIPYQVGALAFSSIQLLGIIAVMSQVAWQVFIVFIPVIAACIWY
QRYYIPSARELSRLVGVCKAPVIQHFSETISGAATIRSFDQQSRFQETNMIVTDAYSRPKFHAAAAMEWLCFRLDMFSSITFAFSLVFLVSFPKGIDPAI
AGLAVTYGLNLNMLQAWVIWNLCNCENKIISVERILQYMSIPSEPPLIIEASRPNRSWPSHGEVEINNLQVRYAPHMPLVLRGLTCTFPGGMKTGIVGRT
GSGKSTLIQTLFRIVEPAAGRIMIDDIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKERKLDSTVIENGEN
WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTSTDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLSNGLIEEYDSPARLLENKSSSFAQLVAEY
RVRSDTGFEKFN

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT3G13080 EST2, ATMRP3, A... MULTIDRUG RESISTANCE PROTEIN 3... Potri.001G362300
[exp]
0 1 Pt-MRP3.1
AT5G58620 C3HZnF zinc finger (CCCH-type) family... Potri.009G046800
[exp]
3.46 0.8959
AT5G46410 SSP4 SCP1-like small phosphatase 4 ... Potri.001G353700
[exp]
3.46 0.9049
AT2G38410 ENTH/VHS/GAT family protein (.... Potri.016G131900
[exp]
4.69 0.8999
AT1G64950 CYP89A5 "cytochrome P450, family 89, s... Potri.007G087950
[exp]
6.32 0.8823
AT3G27310 PUX1 plant UBX domain-containing pr... Potri.001G337533
[exp]
9.38 0.8263
AT5G24810 ABC1 family protein (.1.2) Potri.018G003400
[exp]
10.39 0.8827
AT1G03280 Transcription factor TFIIE, al... Potri.010G102000
[exp]
12.36 0.8602
AT4G35260 IDH-I, IDH1 isocitrate dehydrogenase I, is... Potri.009G165200
[exp]
12.96 0.8676
AT3G20770 EIL AtEIN3, EIN3 ETHYLENE-INSENSITIVE3, Ethylen... Potri.009G159200
[exp]
13.26 0.8596 EIN3A,EIN3.2
AT5G15730 CRLK2, AtCRLK2 calcium/calmodulin-regulated r... Potri.004G113400
[exp]
13.49 0.8560

Potri.001G362300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.