Gene [POPLAR] | FIBexDB

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JGI Phytozome v13

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Popgenie

AspWood

Symbol

Arabidopsis homologues

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Locus ID	BLAST score/e-value	Alias	TAIR10 short description
AT1G55860	4297 / 0	UPL1	ubiquitin-protein ligase 1 (.1.2)
AT1G70320	4238 / 0	UPL2	ubiquitin-protein ligase 2 (.1)
AT3G17205	243 / 4e-65	UPL6	ubiquitin protein ligase 6 (.1.2.3)
AT3G53090	206 / 5e-53	UPL7	ubiquitin-protein ligase 7 (.1.2)
AT4G12570	173 / 3e-43	UPL5	ubiquitin protein ligase 5 (.1)
AT5G02880	159 / 3e-38	UPL4	ubiquitin-protein ligase 4 (.1)
AT4G38600	122 / 5e-27	UPL3, KAK	UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)

Paralogs

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Gene ID	BLAST score/e-value	At best hit	BLAST score/e-value	TAIR10 short description
Potri.011G094100 [exp]	6227 / 0	AT1G55860	4187 / 0.0	ubiquitin-protein ligase 1 (.1.2)
Potri.002G110500 [exp]	1092 / 0	AT1G55860	1125 / 0.0	ubiquitin-protein ligase 1 (.1.2)
Potri.010G150000 [exp]	244 / 1e-65	AT3G17205	1506 / 0.0	ubiquitin protein ligase 6 (.1.2.3)
Potri.008G101300 [exp]	238 / 2e-63	AT3G17205	1432 / 0.0	ubiquitin protein ligase 6 (.1.2.3)
Potri.016G096500 [exp]	213 / 3e-55	AT3G53090	1447 / 0.0	ubiquitin-protein ligase 7 (.1.2)
Potri.006G011701 [exp]	174 / 3e-43	AT4G12570	842 / 0.0	ubiquitin protein ligase 5 (.1)
Potri.016G012900 [exp]	170 / 4e-42	AT4G12570	853 / 0.0	ubiquitin protein ligase 5 (.1)
Potri.009G134300 [exp]	130 / 2e-29	AT4G38600	2234 / 0.0	UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
Potri.004G174700 [exp]	129 / 4e-29	AT4G38600	2241 / 0.0	UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)

Flax homologues

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Locus ID	BLAST score/e-value	At best hit	BLAST score/e-value	TAIR10 short description
Lus10032589 [exp]	4956 / 0	AT1G55860	4402 / 0.0	ubiquitin-protein ligase 1 (.1.2)
Lus10032830 [exp]	1084 / 0	AT1G55860	1189 / 0.0	ubiquitin-protein ligase 1 (.1.2)
Lus10002605 [exp]	1068 / 0	AT1G55860	1128 / 0.0	ubiquitin-protein ligase 1 (.1.2)
Lus10035589 [exp]	200 / 5e-51	AT3G53090	1385 / 0.0	ubiquitin-protein ligase 7 (.1.2)
Lus10010493 [exp]	182 / 8e-46	AT4G12570	830 / 0.0	ubiquitin protein ligase 5 (.1)
Lus10017098 [exp]	175 / 2e-43	AT3G17205	1249 / 0.0	ubiquitin protein ligase 6 (.1.2.3)
Lus10008636 [exp]	152 / 3e-36	AT3G53090	1270 / 0.0	ubiquitin-protein ligase 7 (.1.2)
Lus10019908 [exp]	146 / 3e-34	AT4G38600	1545 / 0.0	UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
Lus10003792 [exp]	130 / 7e-32	AT4G12570	409 / 3e-136	ubiquitin protein ligase 5 (.1)
Lus10027841 [exp]	122 / 6e-27	AT4G38600	2482 / 0.0	UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)

PFAM info

Clan ID	Clan name	Pfam ID	Pfam name	Pfam description
CL0214 [poplar] [flax]	UBA	PF00627 [poplar] [flax]	UBA	UBA/TS-N domain
CL0552 [poplar] [flax]	Hect	PF00632 [poplar] [flax]	HECT	HECT-domain (ubiquitin-transferase)
CL0552 [poplar] [flax]		PF06012 [poplar] [flax]	DUF908	Domain of Unknown Function (DUF908)
CL0552 [poplar] [flax]		PF06025 [poplar] [flax]	DUF913	Domain of Unknown Function (DUF913)
CL0552 [poplar] [flax]		PF14377 [poplar] [flax]	UBM	Ubiquitin binding region

Representative CDS sequence

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>Potri.001G368600.5 pacid=42791848 polypeptide=Potri.001G368600.5.p locus=Potri.001G368600 ID=Potri.001G368600.5.v4.1 annot-version=v4.1

ATGACGAAGCTTAAGAGGAGGAGGTCTTCAGAAGTGCCTCCCAAAATTAAGTCCTTCATCAACAATGTTACTACTACTCCACTTGAGAATATAGAAGAGC

CCCTAAAAGGTTTTGTTTGGGAGTTCGATAAGGGAGATTTTCATCACTGGGTTGATCTTTTTAATCATTTCGATTCATATTTTGAGAAGCACATAAAGCC

AAGAAGAGACTTGCAGGTTGAGGACAACTTTTTGGAATCTGATCCTCCCTTTCCAAGAGAAGCTGTTCTTCAAATTCTCTGTGTTATCAGAATAATTTTA

GAGAACTGCACAAATAAGCACTTTTATAGTTCTTATGAGCAGCATCTTTCTAACCTTCTTGCTTCCACTGATGCGGATGTACTAGAGGCTTGCCTACAGA

CTCTGGCAGCTTTTTTGAAGAAGACTCTCGGAAGATATTCCATTAGAGATACGTCTTTGAATACAAAGTTATTTTCTCTTGCACAAGGCTGGGGTGGAAA

GGATGAGGGTCTTGGATTGATTGCATCTACTGCACAAAATGGGTGTGACCCTGTTGCTTATGAGCTAGGCTGCACCCTCCATTTTGAGTTCTATGCATTG

GATGAGTTGTCAAGTCAGGTCAGTGCCACAGAACGGTCAACTCAGGGCTTACAAACTATCCATCTACCTAATGTCAATGCTTGCCCAGAGACGGATTTAG

AACTTCTGAATAAGTTAGTTGTAGAGTATAAAGTACCTCCCAGCTTAAGATTTTCTTTGTTGACGAGATTGCGGTTTGCAAGGGCTTTTGGCTCTTTGGC

TTCTCGACAGCAGTACACATGCATTCGTTTGTATGCTTTCATTGTTCTTGTTCAAGCAAGCAGTGATGCTGATGATCTAGTTTCTTTCTTTAACTCTGAG

CCTGAGTTCATCAATGAATTAGTTTCACTTTTGAGCTATGAAGATGAAGTCCCTGAGAAAATTCGAATTCTTTGTCTGTTATCATTGGTTGCCCTTTCTC

AAGATCGGTCCCGCCAATCAACTGTCTTGGCTGCTGTCACATCTGGTGGGCACCGTGGTATCCTGTCCAGCCTCATGCAGAAAACCATTGATTCTGTTAT

CAGTGATACATCTAAGTGGTCTGTTGTTTTTTCTGAGGCTCTACTATCTCTTGTCACTGTTCTGGTGTCATCATCATCAGGTTGCTCAGCCATGCGTGAG

GCAGGGTTTATTCCTACTCTTCTACCCCTCCTCAAGGATACAGACCCTCAGCATTTGCATTTGGTAGCTACAGCCGTGCATATTCTAGAGGCATTCATGG

ATTACAGTAATCCTGCAGCAGCATTATTCAGAGAGTTGGGTGGTTTGGATGATACTATCTCTCGACTGAAGGTAGAAGTGTCTCATATTGAAAATTGTTC

AAAGCAACAAGGTGAAGATTCTGATTTGAGGAGGAATTTGCGAGTAGTTGCAAGTGCTTCCTCAGAGTTAGATAGCATGCTCCCGCTGTATTCTGAAGCA

TTAGTTGCATATCATCGACGTTTACTGATGAAAGCTTTGCTACGGGCTATATCCCTTGGAACATATGCTTCCGGGAATACTTCTCGTATTTATGGATCTG

AAGAGAGTTTGTTGCCCCAGTGCCTATGTATAATCTTTAGAAGAGCGAAAGATTTTGGTGGAGGGGTGTTTTCACTTGCAGCCACCGTCATGAGTGATCT

AATTCACAAAGATCCTACGTGTTTTCCTATCTTAGATGCAGCCGGTCTTCCTTCTGCATTTTTGGATGCTATAATGGATGGTGTTCTATGCTCTTCAGAA

GCCATAATGTGTATACCTCAGTGTTTGGATGCCCTGTGCCTGAATAATAATGGTCTTCAGGCTGTAAAAGATCGGAATGCTCTGAGGTGCTTTGTGAAAA

TATTTACATCTAAAACATATTTGCGTGCCCTTTTTGGTGAGGCACCAGGGTCCCTGTCTAGTGGACTGGATGAACTCATGCGCCATGCTTCCTCATTAAG

AGGACCTGGAGTGGATATGGTGATTGAGATACTAAATGCCATTTCAAAAATTGGGTCTGGGGTTGATGCTTCTTACTCGCCCACTGATCCATCTTGTTCT

GCTCCTGTTCCAATGGAAACTGACGCTGAAGAAAGGAGCCCGGTTCTGTCAGATGAGAGGGAATCTTTCAGGATGGAGACCTTGGAGCAGACCACTGAGC

AGTCATCTGATGCCTCTGTAGCAAATGTTGAGTCACTCTTTCCTGAATGTTTAAGCAATGTTGCTCGTCTTCTTGAAACAATTCTTCAGAATTCTGACAC

ATGTCGTATTTTTGTTGAGAAGAAGGGAATTGATGCTGTTCTGCAGTTATTTACTTTGCCCCTAATGCCTCTTTCAACACCGATTGGTCAGATCATATCT

GTTGCATTTAAGAACTTCTCACCACAGCATTCTGCTTCCTTGGCCAGGTCAGTATGTGCCTTCTTGAGAGAACATTTGAAATCAACAAATGAACTATTAG

TTTCAATTGGAGGGGCTCATCTTGCTGTCGTTGAATCTGCTAATCAAGCTAAGGTTCTGAGATATCTTTCCAGCCTTGAGGGTATCCTTTCTCTCTCCAA

TTTTCTGTTGAAGGGGAATAGTACTGTTGTCTCTGAATTGGGCACTGCAGATGCTGATGTGTTGAAGGATCTTGGGAATGCATACCGGGAAATAGTTTGG

CAAGTTTCTCTGTATAATGACTCCAAAGTAGACGAAAAGAGATGTGCCGAACAAGAGACTGAGAGTGCAGATGTGTCTTCATCAAATGCTGTTGGAAGAG

AAAGTGACGATGATGCAAATGTTCCAGTAGTGAGATACATGAACCCTGTTTCTATTAGGAATGGTTCTCAGTCCCTTTGGGGTGGTGAACGTGAATTTCT

CTCAGTCATTCGTTCAGGTGAAGGCTTGCATCGTCGTAGTCGACATGGCTTGGCACGCATACGCGGCGGGAGGACTGGTCGGCACTTGGATGCTTTAAGT

GTTGACTCTGAGATCCCATCAGACGAACCAGAGACATCTTTGCCGAAGTTGAAAAGGAGAACTCCTGATGAGATTCTTAACAAGCTGGCTTCTATATTAC

GTACTTTCTTCTCTGCCCTTGTGAAGGGATTTACATTACCAAACCGTCGAAGGGCTGATGTCGGATCGTTGAGTGCAGCTTCAAAGACATTGGGAACCAC

CTTGGCTAAAATATTTCTTGAAGCTCTCAGTTTCTCTGGGTATTCTACTACTGGACTTGATACATCACTGTCAGTTAAGTGCCGATATCTTGGAAAGGTA

GTTGATGATATGGCAGCCCTCACATTTGACAGCAGGAGGCGTACTTGTTATGCAGCAATGGTCAATAATTTTTATGTACATGGAACCTTTAGGGAGCTGC

TCACCACATTTGAAGCTACAAGTCAACTGTTATGGACACTACCTTACCCTTTTCCTACACCCTCAGTTGACCAAGAGAAGGCAGGTGAAGGAAATAATTT

GTCTCACAGTACATGGCTACTTGACACTTTACACAGCTACTGCCGTGCACTCGAGTATTTTGTAAACTCCTCTCTACTTTTATCTTCAACCTCTGCATCC

CAAGCTCAGCTACTTGTTCAGCCTGTTGCAGTTGGTTTGTCAATTGGGCTATTTCCTGTTCCTAAGGACCCTGAAGTCTTTGTTCGCATGCTGCAGTCTC

AGGTTCTGGATGTCATATTACCTGTCTGGAACCACCAAATGTTTCCAAGTTGCAGTGCTGGCTTCATTGCTTCTATTGTATCACTTGTTACACACATATA

CTCTGGTGTTGGAGATGTCAAAAGGAGTCGCGGTGGCATTGCAGGAAGTACAAACCAAAGGTTCATGCCCCCACCACCTGATGAAAATACAATTGCAACA

ATTGTTGAGATGGGCTTTACAAGAGCAAGAGCTGAAGAGGCATTGAGACGGGTGGAAACAAATAGTGTTGAAATGGCTATGGAGTGGCTGTTTAGTCATG

CTGAGGATCCTGTGCAGGATGATGATGAGTTGGCTCGGGCACTTGCGCTGTCACTAGGAAGTTCATCAGAAGGATCGAAAGTTGGCAATGTGGATAAGTC

TATAGATGCCTTGACAGAAGAAGGACAAATGAAGGTGCCTCCCATTGAAGATATTCTTGCTGCATCCGTGAAGCTGTTCCAGAGTAGTGATACGATGGCA

TTCTCGTTGACAGATTTGCTTGTGACCCTTTGCAATCGGAACAAAGGAGAGGATCGTCTAAAGGTGGCATCTTATCTCATTGAGCAACTAAAGCTTTGCC

CGTTGGATTTTTCAAAGGATTCCAGTGCATTGTGTATGATATCACATATTTTAGCATTGCTCCTTTTTGAGGATGGAACTGTTCGAGAAATTGCTGCACA

AAATGGTATTGTTGCTGCTGCAACAGATGTCTTGATGAATTTCAAGGCTAGTAATGCATCAGGGAGTGAGATTCTTGTCCCAAAATGCGTAAGTGCTTTA

CTGCTCATCTTGGATAACATGTTGCAATCCAGGCCCCGAATCTCCTCTGAAACCATGGGAGGAACCCAGACAGTATCTCCACCTGACTCATCAGTTCCGG

CATCAGGTACAGAAGAAAAAGTGACTTCAGACTTCACCGAGAAAGAATCTGGCACAGCACTTGAGAAAATATTGGGGAAGTCCACTGGTTACCTGACTAT

TGAAGAGAGTCATAAAGTATTACTTGTTGTTTGTGACTTGATGAAACAGCATGTTCCTGCTGTGATCATGCAGGCTATTCTGCAGTTATGTGCTCGCTTG

ACAAAAACTCATGTTTTAGCATTGCAATTTCTTGAAAATGGAGGGTTAACTGCTCTCTTTAATCTTCCAAGAAGTTGCTTCTTCCCTGGATACCAAACTG

TTGCATCTGCTATTGTTCGACACCTCCTTGAAGATCCTCAAACCCTGCAAACTGCTATGGAATTGGAGATACGGCAAACTTTGAGTGGAAATCGCCATGC

TGGGCGTTTTTCCCCTAGGACATTTTTGACGTCTATGGCACCTGTTATCTCCAGAGATCCTGTGGTTTTTATGAAAGCTGCTGCTGCAGTTTGTCAGTTG

GAATCATCAGGAGGGAGGACTTTTGTGGTGTTATCGAAGGAAAAAGAGAAGGAAAAGGACAAATCAAAAGCTTCAGGTGCTGAAGAATCTGTCCGGATTT

CTGAGAGTAAGATGCATGATGGTTCTGGTAAATGTGCCAAAGGCCATAAAAAGATCCCAGCCAATCTTACTCAAGTAATTGATCAGCTTCTTGATATAGT

TCTGAAATACCCTTTGCAAAAAAGTCAGGAAGGTTGTGTTGGTGACTTGAATTCTATGGATGTGGATGAACCTGCTACCAAGTTAAAGGGAAAATCCAAA

GTTGATGAGGCAAAGAAAACGGAGTCTGAATCTGAAATATCTGCTGGACTGGCGAAGGTGAATTTTGTTCTCAAGTTGTTGAGTGATATTCTTCTTATGT

ATGTGCACGCAGTTGGGGTCATACTCAGACGAGACTTGGAATTGTGTCATTTGCGGGGATCTAATCAAACAGGTAGTTCAGGGCTTGGTGGGATAATTCA

TCACATCTTACACCAGCTGCTTCCAATAGCTACAGATAAATCTGCAGGACCTGATGAATGGAGAGACAAATTGTCTGAAAAAGCTTCTTGGTTCCTGGTG

GTTTTGTGCGGTCGATCCGGTGAAGGGAGGAGGCGAGTAATTAATGAACTTGTGAAAGCTATGTCCTCATTCTCAAACTTGGAGAGCAATTCACATAAAA

ACATTTTGTTACCTGATAAAAAAGTTTTTGCTTTTTCTGATTTGGTATATGCAATTTTGTCTAAAAATGCATCCTCCAGCCACTTACCTGGTTCTGGATG

TTCACCGGATATAGCAAAAAGCATGATAGATGGAGGAATGGTGCAGTCTCTCACCGGCATTCTTCAAGCAATTGATTTGGACCATCCTGATGCTCCTAAA

ATTGTTAATCTTCTACTGAAGGCTTTGGAAAGCCTGTCAAGGGCTGCCAATGCTAGTGAGCAAGTTCTTAAATCTGAGGGTCTGAACAGGAAGAAAACTA

CAGGGTCAATTGGCAGGCACGATGAACAGACAGCTGCGTCAGCTGCAGAGACCGTAGAGCATAATCAGAATGTGGGGGGCACACAGGAAGTCCCAGATGA

GGAGGGGACTGACATTCAGCAACAAGAAGGAACTACTCATGTTGACGGTAATCATGCTGTACATCAAAATGAGTCAGCAGAGCAAGACATGAGGTTAGAA

TCGGAAGACACAATGGCAACCAACCCATCAATGGAGGTTGGACTGGATTTCATGCGTGAAGAAATGGAAGAAGGTGGTGTGTTACACAACACTGGCCAAA

TTGAGATGACTTTTCATGTTGAGAACAGGGCTGATGATGATATGGGTGATGAGGATGATGACATGGGAGATGATGGTGATGAGGACGAGGACGAGGACGA

GGACGAGGGAGAGGACGAGGATGAGGATATTGCTGAAGATGGTGCTGGCATGATGTCTCTTGCTGACACTGATGTGGAAGATCATGATGATACTGGCTTG

GGAGATGACTATAATGATGAGATGATTGACGAAGAAGATGATGATTTTCATGAGAATCGTGTTATAGAGGTAAGGTGGAGGGAGGCCCTTGATGGGTTAG

ATCATTTGCAGGTACTTGGTCAGCCTGGAGCTTCAGGTGGTCTCATTGATGTTGCTGCCGAGCCATTTGAAGGGGTGAATGTGGATGATCTTTTTGGTCT

TCGCAGGCCTTTGGGTTTTGACCGTCGGCGTCAGAGTGGCAGGTCTTCCTTTGAGCGTTCTGTCACAGAAGTAAACGGATTTCAACATCCTCTTCTGTTA

AGGCCATCCCAGTCAGGGGATCTGGTTTCTATGTGGTCATCAGGTGGGCATTCATCCAGGGATTTAGAAGCTTTGTCATCTGGGAGCTTTGATGTAGCTC

ATTTTTACATTGATGCTCCTGTTCTTCCATATGAACATGTACCTAGTAGTATATTTGTTGATCGTTCGGGTAGTGCAGCACCCCCACCTTTGTCTGATTA

TTCTGTAGGTATGGACTCGTTGCATACACAGGGACGAAGAGGGCCTGGTGATGGCAGGTGGACAGATGATGGTCAGCCGCAAGCAGGTGCCCAAGCAGCT

GCAATCGCACAAGCAATAGAGGAACAGTTCCTGTCACAGCTGTGCAGTGTACCTGCAACCAATGTTCCCACTGAGAGGCAGTTCCAGAATTCAGGAGTGC

AGGAGAATCAACCATCTGATCCTCTATCCAATGATGGTCAAGTTGTGGTGGATGGCGATAACACCAGCAACCAGCAACTTGAAGTTCATCAAGAAAATGG

CAATGAAGATACCCGCTATCAGCCTAATCCAACAGTTGAAACCGTTCCTTGCAACGAGCAGGTTGATCCTCGGCCTTCATTCAGTGGTGCAGGTGAAGGT

CCACAGGTGGATGAGCCTATGTTAGTTCAACCAATTTCTCTGAATAGTACACCAAATGGTCTTGATAACATGGAAATTGGAGATGGTGATGGCACTGCAT

GTGATCAAGTTGAGACAATGCCGGAGCTTGCCAACTCATCTGCAGAACAACATGCTGCTTTGCATTATGAAGGGGTCCCTGAAGTACCTGCAAGTCTCAA

TGAAGTGCCTATTCAGGCTGTGGGATCCGCAATAGGTGGTCTGTCCGATAATCCTCTGTTGGTTGATTCTGTTTCAGCGATGCCTAATGTGGATCATGTG

AATGCTGATGTTGAAATGAATGGTGCTGATGCTGATGGAAATCAGCTCGAGCAATCCACGCTTGCTTCTGAACGAGGTGCCGACGAGCCATCATCCAGGC

AAGAGACATTGGTTGCTCGGGATGCTGCCCAGGCTGACCAGACTGGTTTAGATAATGGGGCTCCTGCTACAAACGCAATTGATCCAACCTTCCTGGAGGC

TTTACCCGAAGATTTACGAGCAGAAGTTCTAGCTTCCCAGCAGGCTCAGTCTGTTCAACCTCCAACTTATGCTCCACCTTCTGTTGATGATATTGATCCT

GAATTTCTGGCTGCCCTTCCTCCAGACATCCAAGCAGAGGTTTTGGCACAACAAAGGGCACAGCGGATTGCACAGCAGGCTGAAGGACAGCCTGTTGACA

TGGATAATGCTTCAATAATTGCGACTTTTCCTGCTGATTTGCGTGAAGAGGTGCTTTTGACATCTTCAGAAGCAGTATTATCAGCATTGCCTTCACCATT

ACTTGCCGAAGCCCAAATGCTAAGGGACCGAGCAATGAGTCACTATCAGGCTCGCAGCCTGTTTGGTAGCAGCCACAGGCTAAGTAGTCGTAGAAATGGT

TTGGGGTTTGATAGGCAGACAGTGATGGACAGGGGTGTTGGAGTTACAATTGGAAGGAGGGCTACTTCTACTATTGCAGATAGCATGGAGGTGAAGGAAA

TGGAAGGCAAGCCACTTTTGGATGCAAATGCATTGAAAGCTTTGATCCGCCTCCTAAGGTTGGCACAGCCTCTTGGGAAAGGTCTTCTACAAAGACTTCT

GTTGAACCTTTGTGCACATAGTACCACAAGGGCAACTTTGGTTCGCCTTTTGCTCGATATGATTAAACCTGAGGCTGAAGGGTCAATCAGTGGATTGGCA

ACAATTAACTCCCAGAGGCTTTATGGCTGTCAGTCAAATGTTGTTTATGGTCGATCACAGTTGTTGGATGGTCTTCCTCCCTTGGTTTTGCGTCGAATTC

TTGAAATCTTGACCTATTTGTCTACAAATCATACTTCTATTGCCAATATGTTGTTCTACTTGGATCCCTCAATTGTTTCGGAGCCTCTAAGTCCAAAATA

TCTGGAAACCAAGATGGATAAAGGCAAGGAGAAAATTGATGATGGAGGTGATTCATTAAAACCTCTGGGTGACACTGATGATATTCCTTTGATCCTGTTC

CTGAAGCTTTTGAACCGACCACTTTTTCTACGCAGCACTGCTCATCTTGAGCAGGTCATGGGATTGCTTCAAGTAGTAGTTTTTATGGCAGCGTCAAAAT

TAGAGAGCCAGGCTCAATCTGGACAGGCGAGGGAGACTTCCCAAAAACAAACTGTTGGTGAAGCTTCTAGTGATGTTCCAAGTGTTCCGCCTGTGGTTGC

AGAGTCAAGTGAAGAAGACAAAGCTGCCAGTGCTGGGTTATCCGTTTCTGATGGAAAGAGGAGCATTGATGCATCCAGTGTTTTCTTGCAGTTGCCACAA

GCTGATTTGCGCAATCTGTGCAGCCTTCTTGGTCGTGAAGGGCTGTCAGATAAAGTGTACATGCTAGCTGGAGAAGTGCTTAAGAAGTTGGCCTCAGTTG

TTGCAACCCATCGTAAATTCTTTACTTTGGAGCTTTCAGAATTAGCTCATGGGTTGAGCAGTTCAGCTGTCAGTGAGCTTGTTACCTTGAGGAACACACA

CATGCTGGGTCTAAGTTCTGGCTCCATGGCTGGGGCAGCAATCCTACGTGTGCTACAGGCACTCAGCTCACTTACCTCACCCACTGTTGATGAGAATATG

AACGTGGAGCACAATGGGGAACAGGAGGAGCAAGCTACCATGTGGAACTTAAGTATTGCACTTGAGCCATTGTGGCAGGAATTGAGCGAATGTATTAGTG

TGACAGAGATGCAGCTCATTCAGAGCACTTTTGGTCGGACTATGTCAAATATTACTGTAGGGGAGCACGTACAGGGGAGCTCTTCTTCATCCCCTCTTCC

TCCAGGAACCCAGAGACTCTTGCCCTTCATTGAAGCTTTCTTTGTTTTGTGTGAAAAGCTACAGGCAAACCAATCCATTGTGCAACAAGATCACATGAGC

ATAACTGCGAGAGAAGTCAAAGAGTCTTCTGGGAGTTCTTCCTCAACCACAGCATACATGGGGGATTCTCAGAGAAAACTTGATGGTGCTGTCACATTTT

CCAGATTTGCAGAAAAGCACCGCCGGCTTTTGAATACTTTTATTAGACAGAATCCTGGCTTGTTGGAGAAATCACTTTCTATGATGCTGAAGGCTCCCAG

ACTTATTGATTTTGATAACAAGAGAGCATATTTCCGCTCCAGAATAAGGCAACAGCATGAGCAACACCTCTCTGGCCCTCTGCGGATAAGTGTTCGGCGG

GCATATGTTTTGGAGGATTCATACAATCAATTGAGGATGCGACCTACTCAGGATCTCAGGGGAAGATTGAATGTGCAGTTCCAAGGTGAAGAGGGTATTG

ATGCTGGGGGTTTGACAAGAGAATGGTATCAACTGCTGTCGAGAGTTGTATTTGACAAGGGAGCATTGCTTTTCACAACTGTGGGGAATAATGTGACTTT

TCAGCCAAACCCTAATTCTGTCTACCAGACAGAACATTTGTCTTACTTCAAGTTTGTGGGCCGTGTGGTTGCCAAGGCATTGTTTGATGGGCAGCTTTTG

GATGTTTACTTTACTCGGTCTTTCTACAAGCACATTCTAGGTGTAAAGGTGACTTACCATGACATAGAGGCTGTTGATCCTGATTATTACAAGAATTTGA

AGTGGATGCTGGAGAATGATGTGAGTTGTGTACCTGACTTGACATTTAGTATGGATGCTGACGAGGAGAAGCACATCCTTTATGAGAAAACTCAGGTTAC

TGATTACGAGCTTAAACCTGGAGGAAGAAACATAAGGGTTACTGAAGAAACAAAGCACGAGTATGTGGACCTTGTTGCTGATCATATCCTGACAAATGCT

ATTCGTCCTCAAATCACTTCATTCCTCGAAGGTTTCAATGAATTGGTCCCAAGGGAACTTATTTCCATTTTTAATGATAAAGAGCTTGAGCTACTAATCA

GTGGACTTCCTGAAATTGATTTGGATGATTTGAAGGCCAACACTGAGTATACCGGCTATACCTCAGCATCTAGCGTTATTCAATGGTTTTGGGAGGTTGT

CAAAGGTTTTAACAAGGAAGACATGGCCAGACTGCTGCAGTTTGTAACTGGAACATCAAAGGTTCCATTGGAGGGTTTCAAGGCTTTGCAGGGTATCTCT

GGGCCTCAGAAGTTTCAGATTCACAAAGCATATGGGGCTCCCGAGCGTTTGCCTTCAGCTCACACATGCTTCAATCAGCTAGACCTTCCTGAGTACACCT

CCAGGGAACAGCTTCAAGAACGCTTGCTGCTTGCCATTCATGAAGCCAGTGAAGGCTTTGGCTTTGGCTAA

AA sequence

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>Potri.001G368600.5 pacid=42791848 polypeptide=Potri.001G368600.5.p locus=Potri.001G368600 ID=Potri.001G368600.5.v4.1 annot-version=v4.1

MTKLKRRRSSEVPPKIKSFINNVTTTPLENIEEPLKGFVWEFDKGDFHHWVDLFNHFDSYFEKHIKPRRDLQVEDNFLESDPPFPREAVLQILCVIRIIL

ENCTNKHFYSSYEQHLSNLLASTDADVLEACLQTLAAFLKKTLGRYSIRDTSLNTKLFSLAQGWGGKDEGLGLIASTAQNGCDPVAYELGCTLHFEFYAL

DELSSQVSATERSTQGLQTIHLPNVNACPETDLELLNKLVVEYKVPPSLRFSLLTRLRFARAFGSLASRQQYTCIRLYAFIVLVQASSDADDLVSFFNSE

PEFINELVSLLSYEDEVPEKIRILCLLSLVALSQDRSRQSTVLAAVTSGGHRGILSSLMQKTIDSVISDTSKWSVVFSEALLSLVTVLVSSSSGCSAMRE

AGFIPTLLPLLKDTDPQHLHLVATAVHILEAFMDYSNPAAALFRELGGLDDTISRLKVEVSHIENCSKQQGEDSDLRRNLRVVASASSELDSMLPLYSEA

LVAYHRRLLMKALLRAISLGTYASGNTSRIYGSEESLLPQCLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFPILDAAGLPSAFLDAIMDGVLCSSE

AIMCIPQCLDALCLNNNGLQAVKDRNALRCFVKIFTSKTYLRALFGEAPGSLSSGLDELMRHASSLRGPGVDMVIEILNAISKIGSGVDASYSPTDPSCS

APVPMETDAEERSPVLSDERESFRMETLEQTTEQSSDASVANVESLFPECLSNVARLLETILQNSDTCRIFVEKKGIDAVLQLFTLPLMPLSTPIGQIIS

VAFKNFSPQHSASLARSVCAFLREHLKSTNELLVSIGGAHLAVVESANQAKVLRYLSSLEGILSLSNFLLKGNSTVVSELGTADADVLKDLGNAYREIVW

QVSLYNDSKVDEKRCAEQETESADVSSSNAVGRESDDDANVPVVRYMNPVSIRNGSQSLWGGEREFLSVIRSGEGLHRRSRHGLARIRGGRTGRHLDALS

VDSEIPSDEPETSLPKLKRRTPDEILNKLASILRTFFSALVKGFTLPNRRRADVGSLSAASKTLGTTLAKIFLEALSFSGYSTTGLDTSLSVKCRYLGKV

VDDMAALTFDSRRRTCYAAMVNNFYVHGTFRELLTTFEATSQLLWTLPYPFPTPSVDQEKAGEGNNLSHSTWLLDTLHSYCRALEYFVNSSLLLSSTSAS

QAQLLVQPVAVGLSIGLFPVPKDPEVFVRMLQSQVLDVILPVWNHQMFPSCSAGFIASIVSLVTHIYSGVGDVKRSRGGIAGSTNQRFMPPPPDENTIAT

IVEMGFTRARAEEALRRVETNSVEMAMEWLFSHAEDPVQDDDELARALALSLGSSSEGSKVGNVDKSIDALTEEGQMKVPPIEDILAASVKLFQSSDTMA

FSLTDLLVTLCNRNKGEDRLKVASYLIEQLKLCPLDFSKDSSALCMISHILALLLFEDGTVREIAAQNGIVAAATDVLMNFKASNASGSEILVPKCVSAL

LLILDNMLQSRPRISSETMGGTQTVSPPDSSVPASGTEEKVTSDFTEKESGTALEKILGKSTGYLTIEESHKVLLVVCDLMKQHVPAVIMQAILQLCARL

TKTHVLALQFLENGGLTALFNLPRSCFFPGYQTVASAIVRHLLEDPQTLQTAMELEIRQTLSGNRHAGRFSPRTFLTSMAPVISRDPVVFMKAAAAVCQL

ESSGGRTFVVLSKEKEKEKDKSKASGAEESVRISESKMHDGSGKCAKGHKKIPANLTQVIDQLLDIVLKYPLQKSQEGCVGDLNSMDVDEPATKLKGKSK

VDEAKKTESESEISAGLAKVNFVLKLLSDILLMYVHAVGVILRRDLELCHLRGSNQTGSSGLGGIIHHILHQLLPIATDKSAGPDEWRDKLSEKASWFLV

VLCGRSGEGRRRVINELVKAMSSFSNLESNSHKNILLPDKKVFAFSDLVYAILSKNASSSHLPGSGCSPDIAKSMIDGGMVQSLTGILQAIDLDHPDAPK

IVNLLLKALESLSRAANASEQVLKSEGLNRKKTTGSIGRHDEQTAASAAETVEHNQNVGGTQEVPDEEGTDIQQQEGTTHVDGNHAVHQNESAEQDMRLE

SEDTMATNPSMEVGLDFMREEMEEGGVLHNTGQIEMTFHVENRADDDMGDEDDDMGDDGDEDEDEDEDEGEDEDEDIAEDGAGMMSLADTDVEDHDDTGL

GDDYNDEMIDEEDDDFHENRVIEVRWREALDGLDHLQVLGQPGASGGLIDVAAEPFEGVNVDDLFGLRRPLGFDRRRQSGRSSFERSVTEVNGFQHPLLL

RPSQSGDLVSMWSSGGHSSRDLEALSSGSFDVAHFYIDAPVLPYEHVPSSIFVDRSGSAAPPPLSDYSVGMDSLHTQGRRGPGDGRWTDDGQPQAGAQAA

AIAQAIEEQFLSQLCSVPATNVPTERQFQNSGVQENQPSDPLSNDGQVVVDGDNTSNQQLEVHQENGNEDTRYQPNPTVETVPCNEQVDPRPSFSGAGEG

PQVDEPMLVQPISLNSTPNGLDNMEIGDGDGTACDQVETMPELANSSAEQHAALHYEGVPEVPASLNEVPIQAVGSAIGGLSDNPLLVDSVSAMPNVDHV

NADVEMNGADADGNQLEQSTLASERGADEPSSRQETLVARDAAQADQTGLDNGAPATNAIDPTFLEALPEDLRAEVLASQQAQSVQPPTYAPPSVDDIDP

EFLAALPPDIQAEVLAQQRAQRIAQQAEGQPVDMDNASIIATFPADLREEVLLTSSEAVLSALPSPLLAEAQMLRDRAMSHYQARSLFGSSHRLSSRRNG

LGFDRQTVMDRGVGVTIGRRATSTIADSMEVKEMEGKPLLDANALKALIRLLRLAQPLGKGLLQRLLLNLCAHSTTRATLVRLLLDMIKPEAEGSISGLA

TINSQRLYGCQSNVVYGRSQLLDGLPPLVLRRILEILTYLSTNHTSIANMLFYLDPSIVSEPLSPKYLETKMDKGKEKIDDGGDSLKPLGDTDDIPLILF

LKLLNRPLFLRSTAHLEQVMGLLQVVVFMAASKLESQAQSGQARETSQKQTVGEASSDVPSVPPVVAESSEEDKAASAGLSVSDGKRSIDASSVFLQLPQ

ADLRNLCSLLGREGLSDKVYMLAGEVLKKLASVVATHRKFFTLELSELAHGLSSSAVSELVTLRNTHMLGLSSGSMAGAAILRVLQALSSLTSPTVDENM

NVEHNGEQEEQATMWNLSIALEPLWQELSECISVTEMQLIQSTFGRTMSNITVGEHVQGSSSSSPLPPGTQRLLPFIEAFFVLCEKLQANQSIVQQDHMS

ITAREVKESSGSSSSTTAYMGDSQRKLDGAVTFSRFAEKHRRLLNTFIRQNPGLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRQQHEQHLSGPLRISVRR

AYVLEDSYNQLRMRPTQDLRGRLNVQFQGEEGIDAGGLTREWYQLLSRVVFDKGALLFTTVGNNVTFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLL

DVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSCVPDLTFSMDADEEKHILYEKTQVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNA

IRPQITSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTSASSVIQWFWEVVKGFNKEDMARLLQFVTGTSKVPLEGFKALQGIS

GPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYTSREQLQERLLLAIHEASEGFGFG

DESeq2's median of ratios [POPLAR]

Coexpressed genes

Only top 10 genes are shown Show all Download tab-delimited text

Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At alias	At description	Locus	MR	r
AT1G55860	UPL1	ubiquitin-protein ligase 1 (.1...	Potri.001G368600 [exp]	0	1
AT4G38600	UPL3, KAK	UBIQUITIN-PROTEIN LIGASE 3, KA...	Potri.009G134300 [exp]	1.41	0.8999
AT1G55860	UPL1	ubiquitin-protein ligase 1 (.1...	Potri.011G094100 [exp]	3.00	0.8920
AT2G17930		Phosphatidylinositol 3- and 4-...	Potri.005G114300 [exp]	3.16	0.8954
AT1G55860	UPL1	ubiquitin-protein ligase 1 (.1...	Potri.002G110500 [exp]	3.16	0.8803
AT2G26780		ARM repeat superfamily protein...	Potri.001G274500 [exp]	4.00	0.8483
AT3G48050	SUO	'shuttle' in chinese, BAH doma...	Potri.015G072900 [exp]	4.89	0.8767
AT1G02080		transcription regulators (.1.2...	Potri.014G058800 [exp]	8.06	0.8516
AT2G28290	CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...	Potri.008G195900 [exp]	8.24	0.8862
AT1G02080		transcription regulators (.1.2...	Potri.002G143000 [exp]	9.94	0.8589
AT1G02890		AAA-type ATPase family protein...	Potri.014G131000 [exp]	11.66	0.8211

Potri.001G368600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.

Plant FIBer expression Database

Potri.001G368600 [POPLAR]

DESeq2's median of ratios [POPLAR]

Coexpressed genes

Potri.001G368600 coexpression network