Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ATK2.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G54670 1090 / 0 KATC, ATK3 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) AT4G27180 1029 / 0 KATB, ATK2 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA B, kinesin 2 (.1) AT4G21270 907 / 0 KATAP, ATK1 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) AT4G05190 899 / 0 ATK5 kinesin 5 (.1) AT1G72250 330 / 1e-98 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 315 / 5e-96 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G22610 315 / 7e-94 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G73860 313 / 2e-93 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G47500 299 / 3e-88 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT5G27000 298 / 4e-88 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G131900 [exp] 1384 / 0 AT5G54670 1058 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Potri.011G031200 [exp] 924 / 0 AT4G21270 1109 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.004G031600 [exp] 908 / 0 AT4G21270 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.001G436200 [exp] 324 / 3e-96 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.011G140000 [exp] 320 / 1e-94 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.013G020700 [exp] 302 / 4e-91 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G030271 [exp] 301 / 6e-91 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.002G110600 [exp] 302 / 5e-89 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G104000 [exp] 297 / 6e-87 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035838 [exp] 1132 / 0 AT5G54670 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10036621 [exp] 1131 / 0 AT5G54670 1075 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10018384 [exp] 842 / 0 AT4G21270 989 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Lus10007629 [exp] 832 / 0 AT4G21270 975 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Lus10035954 [exp] 312 / 1e-92 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10029914 [exp] 301 / 2e-90 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10005582 [exp] 305 / 1e-89 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10004487 [exp] 298 / 3e-89 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10013714 [exp] 304 / 4e-89 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10025708 [exp] 295 / 1e-86 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00225 [poplar] [flax] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Potri.001G416300.2 pacid=42789940 polypeptide=Potri.001G416300.2.p locus=Potri.001G416300 ID=Potri.001G416300.2.v4.1 annot-version=v4.1 ATGGTTGGGACGGCAAATAATGGCAGAATGAGGCATGCATTTTCAGTTGTAAATGGTGAGCAAGAAGGTGGTTTAAATAGTGCACCACCTAGTAATGCTG GATCAGAGTATGGTGGCTTTGAGTTCACAAGAGAAGATGTTTATGCTTTATTGTGTGAGAGAATGAAATACAAAAACAAGTTCAATTACAAGGAGAGATG TGAAAACATGATGGATTATATAAAGAGGTTAAGGCTATGTATCAAATGGTTTCAAGAGCTAGAAGGAAGTTACCTCTTTGAGCAAGAAAAGTTACAAAAT GCTTTGGATTTTGCTGAGAGTAGATGTGCTGAAATGGATTTGATAGTGAAAAACAAGGAAGAAGAATTAAATTTGATTATCGTTGAGTTGAGAAAGAGCC TTGCTTCTCTACAAGAGAAACTTTCCAAAGAGGAATCTGAGAAGTTGGCTGCAATGGATTCTCTTGCAAGAGAGAAAGAGGCTAGACTTACCGTTGAAAA GTCACAAGCTTCCCTCTCTGAAGAGCTCGGAAAGATTCAAGGAGAGCTTCAAAATGCGAATCAAAGGATAACATCAGTAAGTGATATGTACAAGTTGCTA CAGGAGTACAATTCAAGCTTACAACTGTACAATAGCAAGCTTCAGACAGATCTTGACACAGCTCATGAAAATGTAAAGCGTGGAGAAAAAGAGAAAGCTG CTATAGTAGAGAACCTAAGCACCTTGGGGGGTCAATACATGTCATTGCAAGATCAATTTAATTCGTGCAAAGCATCCGTGAATGATGCTGCAAAGCAAAA GGATGCGCTGGTGAAAGAAGTTGCATCTGTAAGGGCAGAGTTGCAACAGGTGAGAGAGGATCGTGATCAACTGCAATTGCAAGTGCAAACTTTAACAGCT GAAGTAGTTAATTGTGAAGAGCTCGTTATAAAATCAAATGAATTAAAGGAAAGATGTGTATCCCAAAGCAACCAGTTGAAGACATTGCAGGATCAGCTAG ATGCCGCCCAAAATAAATTAAGGGTATCTGATTTATCTGCATTTGAGGCAAAAACTGAATTTGAAGAACAAAAGAAACTTATATGTGAGTTACAAAACCG CTTAGAAGATGCAGAACTTAAAATTGTTGAAGGAGAGACGTTAAGGAAAAAGCTACACAATACAATATTGGAACTAAAGGGAAATATTCGTGTGTTTTGT CGTGTACGGCCTTTGTTGCCAGAGGATAGTCCTGGTGCTGATGGAAAAGATGTATCTTATCCCACCACAACAGAAGCTCTCGGGCGAGGCATTGATCTGA CACAAAATGGGCAAAAATATTCTTTCACTTTTGATAAAGTTTTTATGCCTGATTCAACACAAGAGGATGTTTTTGTAGAAATTTCTCAGCTTGTTCAAAG TGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTACGGCCAAACTGGTTCTGGTAAAACCTATACCATGATGGGCAAACCAGGAAACCTGGAGCAGAAG GGGTTGATACCCAGGTCATTAGAACAAATATTCCAAACTAGGCAATCTCTTCAATCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATAT ACAATGAAACAATCCGAGATTTATTGTCAACTAAAGATTCATCAAGAACAGAGTATGGTAGTAATGGAAAGCAATACACAATTAAGCACGATGCCAACGG GAACACACATGTTTCCGATCTCACTGTTGTGGATGTTTGCAGTTCTAGAGAGGTCTCTTTTCTCTTGGATCAGGCATCTCATAGTAGGTCTGTTGGCAAG ACCCAAATGAATGAGCAATCATCTAGAAGTCACTTTGTTTTCACATTGCGAATATCTGGTGTTAATGAGAACACAGAACAACAAGTACAAGGTGTTTTGA ATCTTATTGATCTTGCTGGGAGTGAACGTCTATCCAAGAGTGGCTCGACTGGAGATAGATTGAGAGAAACCCAAGCTATCAATAAAAGCTTGTCATCTTT AAGTGATGTTATATTTTCCTTGGCAAAGAAGGAGGATCATGTACCATTTAGAAACTCAAAGCTTACTTATCTATTGCAGCCATGTTTGGGTGGAGACTCG AAGACACTGATGTTCGTAAACATTTCTCCTGATCACTCTTCACTGGGTGAGTCACTTTGTTCACTCCGATTTGCATCCAGGGTTAATGCTTGTGAGATAG GTATTCCTCGACGTCAAGCCAACATGCGGTCGTTTGATTCTCGCTTGAGTTTGGGCTGA
AA sequence Show only first row Show all	>Potri.001G416300.2 pacid=42789940 polypeptide=Potri.001G416300.2.p locus=Potri.001G416300 ID=Potri.001G416300.2.v4.1 annot-version=v4.1 MVGTANNGRMRHAFSVVNGEQEGGLNSAPPSNAGSEYGGFEFTREDVYALLCERMKYKNKFNYKERCENMMDYIKRLRLCIKWFQELEGSYLFEQEKLQN ALDFAESRCAEMDLIVKNKEEELNLIIVELRKSLASLQEKLSKEESEKLAAMDSLAREKEARLTVEKSQASLSEELGKIQGELQNANQRITSVSDMYKLL QEYNSSLQLYNSKLQTDLDTAHENVKRGEKEKAAIVENLSTLGGQYMSLQDQFNSCKASVNDAAKQKDALVKEVASVRAELQQVREDRDQLQLQVQTLTA EVVNCEELVIKSNELKERCVSQSNQLKTLQDQLDAAQNKLRVSDLSAFEAKTEFEEQKKLICELQNRLEDAELKIVEGETLRKKLHNTILELKGNIRVFC RVRPLLPEDSPGADGKDVSYPTTTEALGRGIDLTQNGQKYSFTFDKVFMPDSTQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGNLEQK GLIPRSLEQIFQTRQSLQSQGWKYEMQVSMLEIYNETIRDLLSTKDSSRTEYGSNGKQYTIKHDANGNTHVSDLTVVDVCSSREVSFLLDQASHSRSVGK TQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSDVIFSLAKKEDHVPFRNSKLTYLLQPCLGGDS KTLMFVNISPDHSSLGESLCSLRFASRVNACEIGIPRRQANMRSFDSRLSLG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G54670		KATC, ATK3	KINESIN-LIKE PROTEIN IN ARABID...		Potri.001G416300 [exp]	0	1	ATK2.2
AT1G50010		TUA2	tubulin alpha-2 chain (.1)		Potri.002G111900 [exp]	2.44	0.9564
AT3G05270			Plant protein of unknown funct...		Potri.007G098500 [exp]	2.44	0.9531
AT1G10720			BSD domain-containing protein ...		Potri.014G014200 [exp]	2.82	0.9521
AT3G16920		ATCTL2	chitinase-like protein 2 (.1)		Potri.010G141600 [exp]	3.16	0.9535
AT4G19110			Protein kinase superfamily pro...		Potri.003G101600 [exp]	4.12	0.9326
AT4G28500	NAC	ANAC073, SND2, ...	SECONDARY WALL-ASSOCIATED NAC ...		Potri.007G135300 [exp]	5.47	0.9429
AT3G15050		IQD10	IQ-domain 10 (.1)		Potri.011G096500 [exp]	5.47	0.9408
AT5G44030		IRX5, NWS2, CES...	IRREGULAR XYLEM 5, cellulose s...		Potri.002G257900 [exp]	5.91	0.9490
AT1G13635			DNA glycosylase superfamily pr...		Potri.008G112300 [exp]	6.00	0.9359
AT1G29200			O-fucosyltransferase family pr...		Potri.011G068300 [exp]	6.92	0.9424

Compare expression of checked genes

Potri.001G416300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.